In [1]:
# Parameters
data_name = "Nfil3"
task_idxs = "0-213,216-278"
homer_root = "/srv/scratch/msharmin/mouse_hem/with_tfd/full_mouse50/Naive_scans"
modisco_root = "/srv/scratch/msharmin/mouse_hem/with_tfd/full_mouse50/Naive_modisco2019"
overwrite = False
In [2]:
from matlas.reports import collect_motifDB_to_be_displayed, display_comparative_cell_types

load data from labcluster

Using TensorFlow backend.
2019-08-23 11:22:59,735 [WARNING] git-lfs not installed
In [3]:
homer_matches, modisco_matches = collect_motifDB_to_be_displayed(task_idxs, homer_root, modisco_root, 
                                                              overwrite=False)

TF-MoDISco is using the TensorFlow backend.
In [4]:
display_comparative_cell_types(data_name, homer_matches, modisco_matches)
Nfil3: Motif: M01819_2.00



Forward PWM

Reverse PWM

Shared Cell types both TF-MoDISco and Homer finds Nfil3: #58

Cell typeModiscoHomer
SKLTL_Muscle;8wks;D;En

Pattern: metacluster_1/pattern_5

Significance: 0.00981253

/

Pattern: metacluster_1/pattern_6

Significance: 0.011901700000000001

Pattern: motif5.motif

Significance: 0.035122900000000006

416B;HMTP_SPNSN;CD34+;D;En

Pattern: metacluster_1/pattern_4

Significance: 0.0213718

/

Pattern: metacluster_1/pattern_16

Significance: 0.0275103

Pattern: motif6.motif

Significance: 0.0214319

AML;D;En

Pattern: metacluster_1/pattern_2

Significance: 0.00134962

/

Pattern: metacluster_1/pattern_11

Significance: 0.0350605

Pattern: motif3.motif

Significance: 0.000765705

MCRPHG_BMD.UnStmltd;A;GEO

Pattern: metacluster_1/pattern_4

Significance: 0.032386200000000004

/

Pattern: metacluster_1/pattern_7

Significance: 0.017107400000000002

Pattern: motif11.motif

Significance: 0.0214828

MCRPHG_BMD.LPD_Stmltd;A;GEO

Pattern: metacluster_1/pattern_6

Significance: 0.0412095

/

Pattern: metacluster_1/pattern_7

Significance: 0.0485441

Pattern: motif6.motif

Significance: 0.045365499999999996

DC_LPS;6h;A;GEO

Pattern: metacluster_1/pattern_4

Significance: 0.0369016

/

Pattern: metacluster_1/pattern_7

Significance: 0.0403247

Pattern: motif5.motif

Significance: 0.00355367

BSPHL;A;CL

Pattern: metacluster_1/pattern_3

Significance: 0.000984503

/

Pattern: metacluster_1/pattern_7

Significance: 0.00520873

Pattern: motif6.motif

Significance: 0.00602215

ESNPHL_ex-vivo_BlbC;A;CL

Pattern: metacluster_0/pattern_2

Significance: 0.000897048

/

Pattern: metacluster_0/pattern_7

Significance: 0.0336754

Pattern: motif9.motif

Significance: 0.00892193

DC_LPS;2h;A;GEO

Pattern: metacluster_1/pattern_5

Significance: 0.00108271

/

Pattern: metacluster_1/pattern_6

Significance: 0.026007799999999998

Pattern: motif6.motif

Significance: 0.00409926

NTRPHL;A;CL

Pattern: metacluster_1/pattern_3

Significance: 0.00686804

/

Pattern: metacluster_1/pattern_4

Significance: 0.031927199999999996

Pattern: motif3.motif

Significance: 0.0463801

DC_pBMD;A;GEO

Pattern: metacluster_1/pattern_1

Significance: 0.000424444

/

Pattern: metacluster_1/pattern_6

Significance: 0.039839400000000004

Pattern: motif2.motif

Significance: 0.017600599999999997

/

Pattern: motif6.motif

Significance: 0.0539173

NIH3T3;D;En

Pattern: metacluster_1/pattern_4

Significance: 0.042797800000000004

/

Pattern: metacluster_1/pattern_6

Significance: 0.0515555

Pattern: motif5.motif

Significance: 0.00517096

MTR_NRN_MN1;methyl3;D;En

Pattern: metacluster_0/pattern_7

Significance: 0.0469668

/

Pattern: metacluster_0/pattern_16

Significance: 0.023210599999999998

/

Pattern: metacluster_0/pattern_17

Significance: 0.00900359

Pattern: motif7.motif

Significance: 0.0188375

3T3-L1;D;En

Pattern: metacluster_1/pattern_7

Significance: 0.0371965

/

Pattern: metacluster_1/pattern_9

Significance: 0.0199351

Pattern: motif9.motif

Significance: 0.00258666

SKN_EPTHL;A;GEO

Pattern: metacluster_0/pattern_5

Significance: 0.00911157

/

Pattern: metacluster_0/pattern_11

Significance: 0.015631700000000002

Pattern: motif19.motif

Significance: 0.053061800000000006

DC_BMD;A;CL

Pattern: metacluster_1/pattern_7

Significance: 0.0184853

/

Pattern: metacluster_1/pattern_9

Significance: 0.0218824

Pattern: motif11.motif

Significance: 0.027280099999999998

MCRPHG;A;CL

Pattern: metacluster_1/pattern_5

Significance: 0.00337946

/

Pattern: metacluster_1/pattern_7

Significance: 0.04674280000000001

Pattern: motif7.motif

Significance: 0.0115333

ePyramidal_NRN;A;GEO

Pattern: metacluster_1/pattern_6

Significance: 0.00644731

/

Pattern: metacluster_1/pattern_9

Significance: 0.0172703

Pattern: motif7.motif

Significance: 0.0458534

iPV_NRN;A;GEO

Pattern: metacluster_1/pattern_6

Significance: 0.0370541

/

Pattern: metacluster_1/pattern_13

Significance: 0.0319123

Pattern: motif13.motif

Significance: 0.00641598

iVIP_NRN;A;GEO

Pattern: metacluster_1/pattern_15

Significance: 0.023621400000000004

Pattern: motif22.motif

Significance: 0.0364107

eCortical_NRN;A;GEO

Pattern: metacluster_1/pattern_9

Significance: 0.0252939

Pattern: motif9.motif

Significance: 0.020813400000000003

ES;MEF;A;CL

Pattern: metacluster_1/pattern_5

Significance: 0.0532524

/

Pattern: metacluster_1/pattern_11

Significance: 0.0122399

Pattern: motif9.motif

Significance: 0.0248269

Muscle;A;CL

Pattern: metacluster_1/pattern_7

Significance: 0.0422834

/

Pattern: metacluster_1/pattern_11

Significance: 0.0176832

Pattern: motif9.motif

Significance: 0.0248543

Heart;D;En

Pattern: metacluster_0/pattern_6

Significance: 0.0158039

/

Pattern: metacluster_0/pattern_12

Significance: 0.00469509

Pattern: motif7.motif

Significance: 0.0476194

Adrenal;A;CL

Pattern: metacluster_1/pattern_4

Significance: 0.0383511

/

Pattern: metacluster_1/pattern_6

Significance: 0.0149756

Pattern: motif7.motif

Significance: 0.011742299999999999

Mammary_BptfKO;A;GEO

Pattern: metacluster_0/pattern_3

Significance: 0.0263611

/

Pattern: metacluster_0/pattern_8

Significance: 0.0400654

Pattern: motif10.motif

Significance: 0.023328099999999997

/

Pattern: motif13.motif

Significance: 0.00770215

placenta;A;CL

Pattern: metacluster_0/pattern_8

Significance: 0.00101878

/

Pattern: metacluster_0/pattern_10

Significance: 0.00652886

Pattern: motif9.motif

Significance: 0.0275053

pMeg;A;En

Pattern: metacluster_1/pattern_2

Significance: 0.0473314

Pattern: motif3.motif

Significance: 0.000404332

MegP;A;En

Pattern: metacluster_1/pattern_3

Significance: 0.0467819

/

Pattern: metacluster_1/pattern_16

Significance: 0.0357023

Pattern: motif4.motif

Significance: 0.000522432

DC_LPS;4h;A;En

Pattern: metacluster_1/pattern_5

Significance: 0.00849324

/

Pattern: metacluster_1/pattern_8

Significance: 0.037375900000000004

Pattern: motif6.motif

Significance: 0.00370041

BRN;FRNTL_CRTX;A;CL

Pattern: metacluster_1/pattern_4

Significance: 0.023755900000000003

/

Pattern: metacluster_1/pattern_17

Significance: 0.0327955

/

Pattern: metacluster_1/pattern_19

Significance: 0.0326884

Pattern: motif28.motif

Significance: 0.015151900000000001

BRN;PTMN;A;CL

Pattern: metacluster_1/pattern_9

Significance: 0.00663753

/

Pattern: metacluster_1/pattern_14

Significance: 0.0238019

Pattern: motif18.motif

Significance: 0.0153186

pGMP;A;En

Pattern: metacluster_1/pattern_2

Significance: 0.023137400000000002

Pattern: motif3.motif

Significance: 0.0007468780000000001

BRN;SNSR_MTR_CRTX;A;CL

Pattern: metacluster_1/pattern_10

Significance: 0.00755819

/

Pattern: metacluster_1/pattern_13

Significance: 0.00657964

Pattern: motif21.motif

Significance: 0.00311636

DC;A;En

Pattern: metacluster_1/pattern_5

Significance: 0.0342106

/

Pattern: metacluster_1/pattern_7

Significance: 0.0515981

Pattern: motif5.motif

Significance: 0.00521992

NIH3T3_FBROBLST;D;GEO

Pattern: metacluster_1/pattern_6

Significance: 0.0109403

/

Pattern: metacluster_1/pattern_7

Significance: 0.0409806

Pattern: motif5.motif

Significance: 0.00448351

LVR;8wks;D;GEO

Pattern: metacluster_1/pattern_1

Significance: 0.0358301

/

Pattern: metacluster_1/pattern_13

Significance: 0.0105174

Pattern: motif3.motif

Significance: 0.00045915800000000004

LNG;8wks;D;GEO

Pattern: metacluster_0/pattern_2

Significance: 0.0435299

/

Pattern: metacluster_0/pattern_6

Significance: 0.00654796

Pattern: motif3.motif

Significance: 0.0381672

gamma_delta_TCR;A;CL

Pattern: metacluster_1/pattern_4

Significance: 0.013147

Pattern: motif7.motif

Significance: 0.0322651

416B_MP;CD34+;D;GEO

Pattern: metacluster_1/pattern_4

Significance: 0.0244021

Pattern: motif6.motif

Significance: 0.015512399999999999

WHL_BRN;8wks;D;GEO

Pattern: metacluster_1/pattern_11

Significance: 0.022237299999999998

/

Pattern: metacluster_1/pattern_12

Significance: 0.00361534

Pattern: motif15.motif

Significance: 0.0507279

NIH3T3_FBROBLST;D;En

Pattern: metacluster_1/pattern_3

Significance: 0.058044200000000004

/

Pattern: metacluster_1/pattern_7

Significance: 0.0383329

Pattern: motif4.motif

Significance: 0.0138167

FBRBLST;8wks;D;En

Pattern: metacluster_1/pattern_3

Significance: 0.0394437

/

Pattern: metacluster_1/pattern_10

Significance: 0.033299300000000004

Pattern: motif6.motif

Significance: 0.014513299999999998

/

Pattern: motif11.motif

Significance: 0.0140094

3T3-L1;FBRBLST;D;En

Pattern: metacluster_1/pattern_8

Significance: 0.014461400000000001

/

Pattern: metacluster_1/pattern_9

Significance: 0.027476

Pattern: motif17.motif

Significance: 0.048341

LVR;8wks;D;En

Pattern: metacluster_0/pattern_2

Significance: 0.025717400000000005

/

Pattern: metacluster_0/pattern_11

Significance: 0.00592661

Pattern: motif3.motif

Significance: 0.000636594

NTRPHL;A;GEO

Pattern: metacluster_0/pattern_3

Significance: 0.000554577

/

Pattern: metacluster_0/pattern_7

Significance: 0.00673323

/

Pattern: metacluster_0/pattern_12

Significance: 0.0174097

Pattern: motif5.motif

Significance: 0.010508700000000001

wES;LVR;E11.5;D.;En

Pattern: metacluster_1/pattern_9

Significance: 0.00304697

/

Pattern: metacluster_1/pattern_10

Significance: 0.0565322

Pattern: motif15.motif

Significance: 0.0438348

LVR;P0;D;En

Pattern: metacluster_1/pattern_5

Significance: 0.00224281

/

Pattern: metacluster_1/pattern_8

Significance: 0.017886700000000002

Pattern: motif9.motif

Significance: 0.0204151

LNG;8wks;D;En

Pattern: metacluster_0/pattern_2

Significance: 0.0295345

/

Pattern: metacluster_0/pattern_6

Significance: 0.0456069

Pattern: motif2.motif

Significance: 0.000492846

LNG;P0;D;En

Pattern: metacluster_1/pattern_4

Significance: 0.030875299999999998

/

Pattern: metacluster_1/pattern_5

Significance: 0.00308922

Pattern: motif4.motif

Significance: 0.010206299999999998

Mammary_GLND;A;GEO

Pattern: metacluster_1/pattern_5

Significance: 0.026680799999999998

/

Pattern: metacluster_1/pattern_13

Significance: 0.048453300000000005

Pattern: motif10.motif

Significance: 0.051950699999999995

/

Pattern: motif12.motif

Significance: 0.0444957

Adipocyte_3T3-L1D;C57BL6;D8;D;En

Pattern: metacluster_1/pattern_1

Significance: 0.0514784

/

Pattern: metacluster_1/pattern_6

Significance: 0.044937

Pattern: motif2.motif

Significance: 0.011017399999999998

Adipose;D;En

Pattern: metacluster_0/pattern_0

Significance: 0.0100716

/

Pattern: metacluster_0/pattern_1

Significance: 0.00153963

Pattern: motif1.motif

Significance: 0.00119518

CRBLM;D;En

Pattern: metacluster_1/pattern_6

Significance: 0.00917439

/

Pattern: metacluster_1/pattern_8

Significance: 0.00897424

Pattern: motif10.motif

Significance: 0.0200942

416B_MP;CD34+;D;En

Pattern: metacluster_1/pattern_4

Significance: 0.0207169

Pattern: motif6.motif

Significance: 0.000382401

Muller;P12;D;En

Pattern: metacluster_1/pattern_8

Significance: 0.023186000000000002

/

Pattern: metacluster_1/pattern_11

Significance: 0.0308632

Pattern: motif9.motif

Significance: 0.00361423

/

Pattern: motif15.motif

Significance: 0.0118527

WHL_BRN;8wks;D;En

Pattern: metacluster_1/pattern_8

Significance: 0.0235083

/

Pattern: metacluster_1/pattern_10

Significance: 0.00353439

Pattern: motif8.motif

Significance: 0.013494200000000001

wES;Telenchephalon;D;En

Pattern: metacluster_1/pattern_10

Significance: 0.0315301

/

Pattern: metacluster_1/pattern_12

Significance: 0.00798523

Pattern: motif9.motif

Significance: 0.0555884

Unique Cell types only TF-MoDISco finds Nfil3: #176

Cell typeModiscoHomer
MPP;A;CL

Pattern: metacluster_1/pattern_16

Significance: 0.0109836

Absent
naiveCD8;A;CL

Pattern: metacluster_0/pattern_6

Significance: 0.0401218

Absent
memT;CD4+;A;CL

Pattern: metacluster_1/pattern_3

Significance: 0.00765466

Absent
Th17;CD4+;A;CL

Pattern: metacluster_1/pattern_7

Significance: 0.00562101

Absent
NK_SPLND;A;CL

Pattern: metacluster_0/pattern_7

Significance: 0.00674812

Absent
matureB;A;CL

Pattern: metacluster_0/pattern_8

Significance: 0.038542900000000005

Absent
B1_B;A;CL

Pattern: metacluster_1/pattern_6

Significance: 0.05983480000000001

Absent
plasmaB;A;CL

Pattern: metacluster_1/pattern_10

Significance: 0.0304947

Absent
aB_LPS;A;CL

Pattern: metacluster_1/pattern_8

Significance: 0.026734699999999997

Absent
aB_LPS+IL4;A;CL

Pattern: metacluster_1/pattern_8

Significance: 0.037084

Absent
aB_LPS+IL21;A;CL

Pattern: metacluster_1/pattern_8

Significance: 0.0265788

Absent
aB_LSP+a_d_dextran;A;CL

Pattern: metacluster_0/pattern_6

Significance: 0.0129049

Absent
Mast;A;CL

Pattern: metacluster_0/pattern_6

Significance: 0.00580571

Absent
ESNPHL_SPLND_BlbCA;CL

Pattern: metacluster_0/pattern_8

Significance: 0.0222615

Absent
Tfh_LCMV;A;CL

Pattern: metacluster_1/pattern_8

Significance: 0.0435014

Absent
Tfh;A;CL

Pattern: metacluster_1/pattern_5

Significance: 0.00828448

Absent
aNonTfh;A;CL

Pattern: metacluster_1/pattern_7

Significance: 0.043317699999999994

Absent
aNonTfh_mut;A;CL

Pattern: metacluster_1/pattern_6

Significance: 0.00844357

Absent
Tfr;CD4+CD44+CXCR5+PD1+CD25+;A;CL

Pattern: metacluster_1/pattern_5

Significance: 0.00694923

Absent
naiveT;CD4+_CD44-_CD62L-_CD25-;A;CL

Pattern: metacluster_1/pattern_10

Significance: 0.0375099

Absent
naiveT_mut;CD4+_CD44-_CD62L-_CD25-;A;CL

Pattern: metacluster_1/pattern_8

Significance: 0.0351046

Absent
largeDPprecrsr;CD4+CD8+CD69-;A;CL

Pattern: metacluster_1/pattern_9

Significance: 0.0524024

Absent
smallDPprecrsor;CD4+CD8+CD69-;A;CL

Pattern: metacluster_1/pattern_11

Significance: 0.041162699999999997

Absent
CD4+CD8intTCR+CD69+CD24+;B2defM;A;CL

Pattern: metacluster_1/pattern_5

Significance: 0.0226618

Absent
CD4+CD8-TCR+CD69+CD24+CD25-;B2defM;A;CL

Pattern: metacluster_1/pattern_7

Significance: 0.00945211

Absent
CD4+CD8-TCR+CD69-CD24-CD25-;B2defM;A;CL

Pattern: metacluster_1/pattern_12

Significance: 0.0354263

Absent
CD4+CD8intTCR+CD69+CD24+;MHC2defM;A;CL

Pattern: metacluster_1/pattern_11

Significance: 0.046137300000000006

Absent
CD4+CD8+TCR+CD69-CD24-;MHC2defM;A;CL

Pattern: metacluster_1/pattern_12

Significance: 0.0442538

Absent
CD4+CD8-TCR+CD25+Foxp3-;A;CL

Pattern: metacluster_1/pattern_7

Significance: 0.0564569

Absent
CD4+CD8-TCR+CD25-Foxp3+;A;CL

Pattern: metacluster_1/pattern_6

Significance: 0.044262300000000004

Absent
CD4+CD8-TCR+CD25+Foxp3+;A;CL

Pattern: metacluster_1/pattern_9

Significance: 0.0457632

Absent
Erythroblast;A;CL

Pattern: metacluster_1/pattern_7

Significance: 0.015394299999999998

Absent
DP3a;A;CL

Pattern: metacluster_1/pattern_10

Significance: 0.0383106

Absent
DP3b;A;CL

Pattern: metacluster_1/pattern_13

Significance: 0.0250972

Absent
ISP;A;CL

Pattern: metacluster_1/pattern_8

Significance: 0.0347936

Absent
SML_INTSTN;A;CL

Pattern: metacluster_0/pattern_7

Significance: 0.0469548

Absent
LRG_INTSTN;A;CL

Pattern: metacluster_0/pattern_8

Significance: 0.00559006

Absent
LNG;A;CL

Pattern: metacluster_1/pattern_8

Significance: 0.028635200000000003

/

Pattern: metacluster_1/pattern_12

Significance: 0.0444328

Absent
Adipose;A;CL

Pattern: metacluster_1/pattern_9

Significance: 0.02074

Absent
Mammary;A;CL

Pattern: metacluster_0/pattern_6

Significance: 0.0285015

/

Pattern: metacluster_0/pattern_11

Significance: 0.028414799999999997

Absent
testis;A;CL

Pattern: metacluster_0/pattern_3

Significance: 0.0410351

Absent
SPNL_CHRD;A;CL

Pattern: metacluster_1/pattern_5

Significance: 0.0210715

Absent
STMCH;A;CL

Pattern: metacluster_1/pattern_9

Significance: 0.0576293

Absent
NRV;Eye-OPTC;A;CL

Pattern: metacluster_0/pattern_7

Significance: 0.0249715

Absent
BRN;OLFTRY_BLB;A;CL

Pattern: metacluster_0/pattern_9

Significance: 0.00546318

Absent
BRN;MDL_OBLNGT;A;CL

Pattern: metacluster_1/pattern_8

Significance: 0.013408000000000002

/

Pattern: metacluster_1/pattern_21

Significance: 0.0130286

Absent
BRN;CRBLM;A;CL

Pattern: metacluster_0/pattern_6

Significance: 0.0248534

Absent
aB;CD180;A;CL

Pattern: metacluster_1/pattern_8

Significance: 0.057335199999999996

Absent
LNG_TRM_HSC;A;CL

Pattern: metacluster_1/pattern_4

Significance: 0.0271664

Absent
SHRT_TRM_HSC;A;CL

Pattern: metacluster_1/pattern_4

Significance: 0.0340411

Absent
gamma_delta_TCR_MCR;A;CL

Pattern: metacluster_1/pattern_6

Significance: 0.00972242

Absent
gamma_delta_TCR_M-S-;A;CL

Pattern: metacluster_0/pattern_3

Significance: 0.00519285

Absent
NK;IL2+IL12+;A;CL

Pattern: metacluster_1/pattern_5

Significance: 0.00834078

Absent
ILC2precrsr;A;CL

Pattern: metacluster_1/pattern_8

Significance: 0.0321325

Absent
NCR+ILC3;A;CL

Pattern: metacluster_1/pattern_7

Significance: 0.0479527

Absent
ILC2_Nippo;A;CL

Pattern: metacluster_1/pattern_7

Significance: 0.00550052

Absent
ILC1;A;CL

Pattern: metacluster_1/pattern_3

Significance: 0.0348968

Absent
NCR+ILC3+IL23;A;CL

Pattern: metacluster_1/pattern_5

Significance: 0.0462873

Absent
ILC2;A;CL

Pattern: metacluster_1/pattern_4

Significance: 0.00654948

Absent
Th2_nippo;A;CL

Pattern: metacluster_1/pattern_3

Significance: 0.022521799999999998

Absent
aB_LPS+IL4_24h;A;CL

Pattern: metacluster_0/pattern_6

Significance: 0.042075

Absent
aB_LPS+IL4+Oligomycin_24h;A;CL

Pattern: metacluster_1/pattern_11

Significance: 0.0180186

Absent
CH12_QNTPLE;A;CL

Pattern: metacluster_1/pattern_9

Significance: 0.055588

Absent
wCH12;A;CL

Pattern: metacluster_1/pattern_9

Significance: 0.0311402

Absent
CH12;med14;A;CL

Pattern: metacluster_1/pattern_10

Significance: 0.0547845

Absent
wCH12_drug;A;CL

Pattern: metacluster_1/pattern_12

Significance: 0.038075300000000006

/

Pattern: metacluster_1/pattern_20

Significance: 0.030245799999999996

Absent
mem_precrsrT_SPLND;CD8+;A;GEO

Pattern: metacluster_1/pattern_9

Significance: 0.028001299999999996

Absent
NK_LVRD;CD19-CD3e-NKp46+DX+Trail-;A;GEO

Pattern: metacluster_1/pattern_8

Significance: 0.0101529

Absent
ES;J1;A;CL

Pattern: metacluster_1/pattern_14

Significance: 0.0205791

Absent
ES;E14;A;GEO

Pattern: metacluster_0/pattern_20

Significance: 0.0500986

Absent
ES;F1216;A;GEO

Pattern: metacluster_0/pattern_8

Significance: 0.0229575

Absent
ES;129SV_Jae_C57BL6J;A;GEO

Pattern: metacluster_1/pattern_11

Significance: 0.057564699999999996

Absent
ES;v6.5;A;GEO

Pattern: metacluster_1/pattern_7

Significance: 0.0375676

Absent
RTN;A;GEO

Pattern: metacluster_0/pattern_11

Significance: 0.0164479

Absent
CRBL_GRNL_Precrsr;A;GEO

Pattern: metacluster_0/pattern_9

Significance: 0.036091000000000005

Absent
ILC2+IL33+IL25;A;GEO

Pattern: metacluster_1/pattern_4

Significance: 0.00698451

Absent
ILC1;A;GEO

Pattern: metacluster_1/pattern_7

Significance: 0.00828388

Absent
ILC2;A;GEO

Pattern: metacluster_1/pattern_3

Significance: 0.056519900000000005

Absent
ILC3;A;GEO

Pattern: metacluster_1/pattern_8

Significance: 0.00746919

Absent
ILC1_AbxGRMFree;A;GEO

Pattern: metacluster_1/pattern_3

Significance: 0.00903219

Absent
ILC3_AbxGRMFree;A;GEO

Pattern: metacluster_1/pattern_9

Significance: 0.00596522

Absent
T_LCMV;CD8+;D8;A;GEO

Pattern: metacluster_1/pattern_4

Significance: 0.029114799999999996

Absent
T_LCMV;CD8+;D33;A;GEO

Pattern: metacluster_1/pattern_6

Significance: 0.0150202

Absent
T_LCMV;CD8+;D35;A;GEO

Pattern: metacluster_1/pattern_6

Significance: 0.00562656

Absent
TEff_SPLND;CD8+;A;GEO

Pattern: metacluster_1/pattern_8

Significance: 0.0223257

Absent
TExh_SPLND;CD8+;A;GEO

Pattern: metacluster_1/pattern_10

Significance: 0.0500074

Absent
TSLEC_SPLND;CD8+A;GEO

Pattern: metacluster_1/pattern_10

Significance: 0.04639190000000001

Absent
Teff;TCR_SV40-I_CD8+;D7;A;GEO

Pattern: metacluster_1/pattern_11

Significance: 0.0391388

Absent
cntrl_memT;TCR_SV40-I_CD8+;A;GEO

Pattern: metacluster_1/pattern_12

Significance: 0.044304

Absent
T_MLD;TCR_SV40-I_CD8+;D5;A;GEO

Pattern: metacluster_1/pattern_9

Significance: 0.0596125

Absent
T_MLD;TCR_SV40-I_CD8+;D7;A;GEO

Pattern: metacluster_1/pattern_9

Significance: 0.00927836

Absent
T_MLD;TCR_SV40-I_CD8+;D14;A;GEO

Pattern: metacluster_1/pattern_9

Significance: 0.0105286

Absent
T_MLD;TCR_SV40-I_CD8+;D60;A;GEO

Pattern: metacluster_0/pattern_8

Significance: 0.0403794

Absent
memT_tmrD_lstr;TCR_SV40-I_CD8+;D7;A;GEO

Pattern: metacluster_1/pattern_5

Significance: 0.049924300000000005

Absent
memT_tmrD_lstr;TCR_SV40-I_CD8+;D14;A;GEO

Pattern: metacluster_0/pattern_6

Significance: 0.00430898

Absent
memT_tmrD_lstr;TCR_SV40-I_CD8+;D35;A;GEO

Pattern: metacluster_1/pattern_9

Significance: 0.028079200000000002

Absent
memT_tmrD;TCR_SV40-I_CD8+;D7;A;GEO

Pattern: metacluster_1/pattern_10

Significance: 0.0174123

Absent
memT_tmrD;TCR_SV40-I_CD8+;D14;A;GEO

Pattern: metacluster_1/pattern_7

Significance: 0.00824026

Absent
iNKT;A;GEO

Pattern: metacluster_1/pattern_8

Significance: 0.0258113

Absent
aB;A;GEO

Pattern: metacluster_1/pattern_7

Significance: 0.031154200000000003

Absent
prePLSM_B;A;GEO

Pattern: metacluster_1/pattern_7

Significance: 0.0521153

Absent
B_SPLND;A;GEO

Pattern: metacluster_1/pattern_7

Significance: 0.0300074

Absent
preB_BMD;A;GEO

Pattern: metacluster_1/pattern_10

Significance: 0.049576499999999996

Absent
Erythroid;Ter119+;A;GEO

Pattern: metacluster_0/pattern_9

Significance: 0.0255048

Absent
AML;AE9a;A;GEO

Pattern: metacluster_1/pattern_10

Significance: 0.0341004

Absent
ENDRM_ESD;A;GEO

Pattern: metacluster_1/pattern_9

Significance: 0.043260900000000005

Absent
ROD_PHT_RCPTR;A;GEO

Pattern: metacluster_1/pattern_10

Significance: 0.03610719999999999

Absent
GCN_PHT_RCPTR;A;GEO

Pattern: metacluster_1/pattern_5

Significance: 0.0142753

/

Pattern: metacluster_1/pattern_15

Significance: 0.0155555

Absent
BL_CN_PHT_RCPTR;A;GEO

Pattern: metacluster_1/pattern_7

Significance: 0.0420188

Absent
CN_PHT_RCPTR;A;GEO

Pattern: metacluster_1/pattern_9

Significance: 0.025883099999999996

Absent
npES;3rd_Rhmbmr_delC;E8.5;A;GEO

Pattern: metacluster_0/pattern_21

Significance: 0.027055000000000003

Absent
wES;5th_Rhmbmr;E9.5;A;GEO

Pattern: metacluster_0/pattern_16

Significance: 0.027756700000000002

Absent
wES;5th_Rhmbmr;E8.5;A;GEO

Pattern: metacluster_0/pattern_15

Significance: 0.048566399999999996

Absent
npES;5th_Rhmbmr_delA;E8.5;A;GEO

Pattern: metacluster_0/pattern_18

Significance: 0.033743

Absent
wES;posterior;2;E9.5;A;GEO

Pattern: metacluster_0/pattern_18

Significance: 0.0276532

Absent
wES;posterior;1;E8.5;A;GEO

Pattern: metacluster_0/pattern_16

Significance: 0.0231697

Absent
npES;posterior_delA;E8.5;A;GEO

Pattern: metacluster_0/pattern_19

Significance: 0.033566000000000006

Absent
npES;posterior_delC;E8.5;A;GEO

Pattern: metacluster_0/pattern_16

Significance: 0.045381599999999994

Absent
BCK_SKN;A;GEO

Pattern: metacluster_0/pattern_14

Significance: 0.00212292

/

Pattern: metacluster_0/pattern_15

Significance: 0.0136334

Absent
wES.CRNL_NRL_CRST;E10.5;A;GEO

Pattern: metacluster_0/pattern_9

Significance: 0.018352

Absent
NPC;F129;A;GEO

Pattern: metacluster_1/pattern_9

Significance: 0.013024

Absent
NPC;G4;A;GEO

Pattern: metacluster_1/pattern_6

Significance: 0.027388799999999998

Absent
NPC;Ch13;A;GEO

Pattern: metacluster_1/pattern_6

Significance: 0.0436298

Absent
NPC;mE6;A;GEO

Pattern: metacluster_1/pattern_8

Significance: 0.0497535

Absent
G_NRN_P;A;GEO

Pattern: metacluster_1/pattern_9

Significance: 0.025604400000000003

Absent
ThMS_MEC;Aire++;A;GEO

Pattern: metacluster_1/pattern_8

Significance: 0.0190805

Absent
Corticotrope;A;GEO

Pattern: metacluster_0/pattern_8

Significance: 0.0262481

/

Pattern: metacluster_0/pattern_21

Significance: 0.014002500000000001

/

Pattern: metacluster_0/pattern_22

Significance: 0.0131833

Absent
Melanotrope;A;GEO

Pattern: metacluster_0/pattern_7

Significance: 0.019629900000000002

Absent
npES;ZHBTC4;doxyc;treat;A;GEO

Pattern: metacluster_0/pattern_19

Significance: 0.0224729

Absent
npES;ZHBTC4;Brg1fl_fl;untreat;A;GEO

Pattern: metacluster_1/pattern_18

Significance: 0.0138643

Absent
EPP;A;En

Pattern: metacluster_1/pattern_8

Significance: 0.034431199999999995

Absent
MegEP;A;CL

Pattern: metacluster_1/pattern_10

Significance: 0.034658

Absent
pErythroblast;A;En

Pattern: metacluster_1/pattern_8

Significance: 0.0299529

Absent
pCMP;A;CL

Pattern: metacluster_1/pattern_9

Significance: 0.049457

/

Pattern: metacluster_1/pattern_11

Significance: 0.0363459

Absent
ES;ZhBTc4;1;D;GEO

Pattern: metacluster_1/pattern_20

Significance: 0.030320599999999996

Absent
ES;ZhBTc4;2;D;GEO

Pattern: metacluster_1/pattern_19

Significance: 0.0592706

Absent
3134_mammaryADNCRCNM;D;GE

Pattern: metacluster_1/pattern_13

Significance: 0.04909469999999999

/

Pattern: metacluster_1/pattern_14

Significance: 0.00231611

Absent
T_SPLND_blstCLTRD;CD4+;D;GEO

Pattern: metacluster_1/pattern_6

Significance: 0.0525182

Absent
naiveT_SPLND;CD4+;D;GEO

Pattern: metacluster_1/pattern_5

Significance: 0.05628969999999999

Absent
apCD4Eff;D;GEO

Pattern: metacluster_1/pattern_8

Significance: 0.030807599999999997

Absent
ES;129S1_SVImJ_CJ7;D;En

Pattern: metacluster_1/pattern_11

Significance: 0.059583800000000006

Absent
ES;E14;D;En

Pattern: metacluster_1/pattern_20

Significance: 0.0410332

Absent
ES;C57BL_6J;R1;D;En

Pattern: metacluster_1/pattern_18

Significance: 0.0188073

Absent
KDNY;P0;D;En

Pattern: metacluster_1/pattern_10

Significance: 0.00289899

Absent
KDNY;8wks;D;En

Pattern: metacluster_1/pattern_9

Significance: 0.00984952

/

Pattern: metacluster_1/pattern_12

Significance: 0.0368752

Absent
wES;LNG;E14.5;D;En

Pattern: metacluster_1/pattern_9

Significance: 0.0311043

/

Pattern: metacluster_1/pattern_12

Significance: 0.028729900000000003

Absent
Heart;8wks;D;En

Pattern: metacluster_0/pattern_10

Significance: 0.00246421

Absent
Heart;P0;D;En

Pattern: metacluster_1/pattern_5

Significance: 0.0192492

Absent
RTN;D1;D;En

Pattern: metacluster_0/pattern_11

Significance: 0.032470599999999995

Absent
wES;RTN;E11.5;D;En

Pattern: metacluster_0/pattern_18

Significance: 0.0483239

Absent
abTreg;CD4+_CD25+;8wks;D;En

Pattern: metacluster_1/pattern_9

Significance: 0.055412199999999995

Absent
EP;c-kit+CD71+Ter119+;D;En

Pattern: metacluster_1/pattern_10

Significance: 0.017637599999999996

Absent
wES;MSDRM;E11.5;D;En

Pattern: metacluster_0/pattern_17

Significance: 0.0183976

Absent
wES.Fr_BRN;E14.4;D;En

Pattern: metacluster_0/pattern_13

Significance: 0.0425457

Absent
Fr_BRN;P0;D;En

Pattern: metacluster_1/pattern_12

Significance: 0.05437919999999999

Absent
Hnd_BRN;P0;D;En

Pattern: metacluster_1/pattern_11

Significance: 0.018774700000000002

Absent
wES;Hnd_BRN;E11.5;D;En

Pattern: metacluster_0/pattern_15

Significance: 0.0334421

Absent
wES;Hnd_BRN;E14.5;D;En

Pattern: metacluster_0/pattern_20

Significance: 0.0230958

Absent
wES;Md_BRN;E14.4;D;En

Pattern: metacluster_0/pattern_17

Significance: 0.0201773

Absent
wES;Md_BRN;E11.5;D;En

Pattern: metacluster_0/pattern_14

Significance: 0.023629900000000002

Absent
Md_BRN;D;En

Pattern: metacluster_1/pattern_12

Significance: 0.0183726

Absent
wES;WHL_BRN;E14.5;D;En

Pattern: metacluster_1/pattern_10

Significance: 0.03680119999999999

Absent
wES;limb;E14.5;D;En

Pattern: metacluster_1/pattern_8

Significance: 0.045897

Absent
wES;Fr_lmb;E11.5;D;En

Pattern: metacluster_1/pattern_7

Significance: 0.0460272

Absent
wES;Hnd_lmb;E11.5;D;En

Pattern: metacluster_0/pattern_16

Significance: 0.028828700000000002

Absent
wES;FaceP;E14.5;D;En

Pattern: metacluster_0/pattern_9

Significance: 0.0243994

Absent
wES;FaceP;E11.5;D;En

Pattern: metacluster_1/pattern_11

Significance: 0.0430202

Absent
wES;NRL_Tube;E11.5;D;En

Pattern: metacluster_1/pattern_14

Significance: 0.04150569999999999

Absent
LRG_INTSTN;8wks;D;En

Pattern: metacluster_1/pattern_12

Significance: 0.00742709

Absent
STMCH;P0;D;En

Pattern: metacluster_1/pattern_5

Significance: 0.00436187

Absent
3134_mammaryADNCRCNM;D;En

Pattern: metacluster_0/pattern_9

Significance: 0.00732453

/

Pattern: metacluster_0/pattern_10

Significance: 0.049788599999999995

/

Pattern: metacluster_0/pattern_12

Significance: 0.010212

Absent
CH12.LX;D;En

Pattern: metacluster_1/pattern_10

Significance: 0.014447799999999998

Absent
MEF.GATA-1-ER;D;En

Pattern: metacluster_1/pattern_8

Significance: 0.016297700000000002

Absent
MEL;D;En

Pattern: metacluster_1/pattern_14

Significance: 0.0220914

/

Pattern: metacluster_1/pattern_16

Significance: 0.0124453

Absent
MEL_Znc_di-cl;24h;D;En

Pattern: metacluster_1/pattern_20

Significance: 0.00392626

/

Pattern: metacluster_1/pattern_26

Significance: 0.0460508

Absent
MN1;D;En

Pattern: metacluster_1/pattern_5

Significance: 0.0258645

/

Pattern: metacluster_1/pattern_15

Significance: 0.0238247

Absent
No Cell types only Homer finds Nfil3