In [1]:
# Parameters
data_name = "BRN;FRNTL_CRTX;A;CL"
modisco_root = "/srv/scratch/msharmin/mouse_hem/with_tfd/full_mouse50/Naive_modisco2019"
tomtom_report_root = "http://mitra.stanford.edu/kundaje/msharmin/report/tomtom_outs/cells"
task_dir = "task_68-naivegw"
perf_file = "/srv/scratch/msharmin/mouse_hem/with_tfd/full_mouse50/fineFactorized/task_68-naivegw/NaiveauPRC.txt"
homer_root = "/srv/scratch/msharmin/mouse_hem/with_tfd/full_mouse50/Naive_scans"
reportfile = "/mnt/lab_data/kundaje/msharmin/annotations/filtering samples_MS2.xlsx"
sheetname = "filter23"
In [2]:
from matlas.reports import display_metadata
load data from labcluster
Using TensorFlow backend.
2019-08-30 18:55:36,277 [WARNING] git-lfs not installed
In [3]:
display_metadata(data_name, perf_file, reportfile, sheetname)
    Sample Information
    MetaData NameDescription
    Cell typeBrain- Frontal Cortex
    Cell GroupNeural Cells and Tissues
    Experiment NameATAC
    Experiment GroupCasellas Lab
    Pipeline Output
    replicateNaïve overlap peaksIDR peaksTSS enrichment (< 8 is very poor <10 is low)Final number of unique mapping, dup-filtered, chrM filtered readsNumber of reads in called peak regionsFraction of reads in called peak regionsNumber of reads in promoter regionsFraction of reads in promoter regionsNumber of reads in enhancer regionsFraction of reads in enhancer regions
    rep1109956513727.10935281075940917290.077543677480.0827196325340.3719
    Modelling Metadata
    MetricValue
    auPRC0.5957
    Calibrated Recall at 50% FDR0.23
    Number of Positive Examples in Test Data61108
    Number of Negative Examples in Test Data8009743
    Imbalance Ratio in Test Data0.0076
    Test Chromosomeschr2, chr3, chr19
In [4]:
from matlas.reports import display_paiwise_pattern_comparison
from matlas.reports import display_denovo_patterns
In [5]:
display_denovo_patterns(data_name, modisco_root=modisco_root)
TF-MoDISco is using the TensorFlow backend.
The following two links show list of Denovo Patterns and corresponding Motifs discovered by TF-MoDISco
Click here for Denovo Patterns by TF-MoDISco: #23
Pattern NameTF Name(s)Modisco
metacluster_1/pattern_0 # seqlets: 2594 SequenceContrib ScoresHyp_Contrib Scores
Sp3, Sp2, Sp1, Klf3, Sp4, Klf6, Sp5, Klf5, Wt1, Zbtb17,

E2f4, Klf4, Egr1, Klf7, Zfp281, Egr2, Maz, Klf8, Klf12, E2f1, Klf1,

Sall4, Klf15, Srebf2, Egr3
metacluster_1/pattern_1 # seqlets: 2035 SequenceContrib ScoresHyp_Contrib Scores
Gli3
metacluster_1/pattern_2 # seqlets: 1677 SequenceContrib ScoresHyp_Contrib Scores
Nrf1
metacluster_1/pattern_3 # seqlets: 1653 SequenceContrib ScoresHyp_Contrib Scores
Mef2c, Mef2a, Mef2d
metacluster_1/pattern_4 # seqlets: 1515 SequenceContrib ScoresHyp_Contrib Scores
Creb1, Atf1, Creb5, Jdp2, Atf7, Crem, Atf2, Tfe3, Tfec, Srebf1,

Rxrb, Usf1, Tfeb, Mlx, Mitf, Arntl, Bhlhe40, Xbp1, Usf2, Tef, Clock,

Atf3, Nfil3, Jun, Mafb, Creb3l2, Fosl2, Dbp
metacluster_1/pattern_5 # seqlets: 1459 SequenceContrib ScoresHyp_Contrib Scores
Gabpa, Fli1, Ets1, Elk4, Erg, Etv4, Elf1, Elk3, Elk1, Etv1,

Etv5, Etv2, Fev, Etv3, Etv6, XP_911724.4, Elf4, Ehf, Elf2, Elf5, Spi1,

Spdef, Elf3, Spib
metacluster_1/pattern_6 # seqlets: 1419 SequenceContrib ScoresHyp_Contrib Scores
Nfyb, Nfyc, Nfya, Pbx3, Foxi1
metacluster_1/pattern_7 # seqlets: 1324 SequenceContrib ScoresHyp_Contrib Scores
Ctcf, Ctcfl
metacluster_1/pattern_8 # seqlets: 1086 SequenceContrib ScoresHyp_Contrib Scores
Rfx3, Rfx2, Rfx1, Rfx4, Rfx6, Rfx7
metacluster_1/pattern_9 # seqlets: 1050 SequenceContrib ScoresHyp_Contrib Scores
Yy1, Taf1, Zfp42, Mxi1, Zfx
metacluster_1/pattern_10 # seqlets: 1000 SequenceContrib ScoresHyp_Contrib Scores
Junb, Fosl1, Fosb, Fos, Jund, Batf, Bach2, Nfe2l2, Nfe2, Bach1,

Mafa
metacluster_1/pattern_11 # seqlets: 961 SequenceContrib ScoresHyp_Contrib Scores
E2f7
metacluster_1/pattern_12 # seqlets: 766 SequenceContrib ScoresHyp_Contrib Scores
Neurod2, Neurod1, Neurog2, Olig2, Atoh1, Bhlhe22, Tcf21, Lyl1, Neurog1, Msc,

Bhlha15, Msgn1, Twist2, Tal1, Tcf12, Twist1, Ascl1, Myog, Ptf1a, Tfap4, Ascl2
metacluster_1/pattern_13 # seqlets: 557 SequenceContrib ScoresHyp_Contrib Scores
Zfp143, Thap11, Tbx2
metacluster_1/pattern_14 # seqlets: 469 SequenceContrib ScoresHyp_Contrib Scores
Nfib, Nfia, Nfic
metacluster_1/pattern_15 # seqlets: 329 SequenceContrib ScoresHyp_Contrib Scores
metacluster_1/pattern_16 # seqlets: 234 SequenceContrib ScoresHyp_Contrib Scores
Zbtb33
metacluster_1/pattern_17 # seqlets: 233 SequenceContrib ScoresHyp_Contrib Scores
metacluster_1/pattern_18 # seqlets: 179 SequenceContrib ScoresHyp_Contrib Scores
metacluster_1/pattern_19 # seqlets: 108 SequenceContrib ScoresHyp_Contrib Scores
Cebpg, Atf4, Ddit3, Cebpd, Pou3f3, Hlf, Cebpb, Pou5f1, Pou2f2, Sox2,

Cebpe, Cebpa, Pou1f1
metacluster_1/pattern_20 # seqlets: 97 SequenceContrib ScoresHyp_Contrib Scores
Pou2f1
metacluster_1/pattern_21 # seqlets: 45 SequenceContrib ScoresHyp_Contrib Scores
Tfap2b
metacluster_1/pattern_22 # seqlets: 44 SequenceContrib ScoresHyp_Contrib Scores
Mbd2
Click here for Motifs by TF-MoDISco: #156
TF NamePattern(s)
Sp3
Pattern NameModiscoSignificance
metacluster_1/pattern_03.442990000000001e-10
metacluster_1/pattern_90.0253082
metacluster_1/pattern_113.12274e-07
metacluster_1/pattern_210.00104591
metacluster_1/pattern_220.00102963
Sp2
Pattern NameModiscoSignificance
metacluster_1/pattern_01.55274e-09
metacluster_1/pattern_90.017997700000000002
metacluster_1/pattern_111.91436e-07
metacluster_1/pattern_218.86632e-05
metacluster_1/pattern_220.000204507
Sp1
Pattern NameModiscoSignificance
metacluster_1/pattern_00.00132168
metacluster_1/pattern_90.0327693
metacluster_1/pattern_110.0249872
metacluster_1/pattern_210.0012406
metacluster_1/pattern_220.00186501
Klf3
Pattern NameModiscoSignificance
metacluster_1/pattern_02.7386999999999995e-07
metacluster_1/pattern_110.000329578
metacluster_1/pattern_210.004318
metacluster_1/pattern_220.0222754
Sp4
Pattern NameModiscoSignificance
metacluster_1/pattern_00.00140951
metacluster_1/pattern_110.0460269
Klf6
Pattern NameModiscoSignificance
metacluster_1/pattern_00.00058344
metacluster_1/pattern_110.0006352290000000001
metacluster_1/pattern_210.00762142
metacluster_1/pattern_220.017904
Sp5
Pattern NameModiscoSignificance
metacluster_1/pattern_00.000649081
metacluster_1/pattern_110.0249872
Klf5
Pattern NameModiscoSignificance
metacluster_1/pattern_00.000649081
metacluster_1/pattern_110.0272587
Wt1
Pattern NameModiscoSignificance
metacluster_1/pattern_00.000649081
metacluster_1/pattern_110.00639371
metacluster_1/pattern_210.045880000000000004
metacluster_1/pattern_220.0327865
Zbtb17
Pattern NameModiscoSignificance
metacluster_1/pattern_00.000741338
metacluster_1/pattern_10.0157779
metacluster_1/pattern_110.00930838
metacluster_1/pattern_210.0232557
metacluster_1/pattern_220.0543351
E2f4
Pattern NameModiscoSignificance
metacluster_1/pattern_00.00109259
metacluster_1/pattern_110.032003
Klf4
Pattern NameModiscoSignificance
metacluster_1/pattern_00.00339213
metacluster_1/pattern_110.0447199
Egr1
Pattern NameModiscoSignificance
metacluster_1/pattern_00.0400163
metacluster_1/pattern_10.00697731
metacluster_1/pattern_110.030411
Klf7
Pattern NameModiscoSignificance
metacluster_1/pattern_00.00235191
metacluster_1/pattern_110.032003
Zfp281
Pattern NameModiscoSignificance
metacluster_1/pattern_00.0400163
metacluster_1/pattern_10.047355
metacluster_1/pattern_110.037057
Egr2
Pattern NameModiscoSignificance
metacluster_1/pattern_00.00479405
metacluster_1/pattern_10.0261171
metacluster_1/pattern_110.025575999999999998
Maz
Pattern NameModiscoSignificance
metacluster_1/pattern_00.00541482
metacluster_1/pattern_110.00471632
Klf8
Pattern NameModiscoSignificance
metacluster_1/pattern_00.00552762
metacluster_1/pattern_110.041389300000000004
Klf12
Pattern NameModiscoSignificance
metacluster_1/pattern_00.0065667
metacluster_1/pattern_110.0460269
E2f1
Pattern NameModiscoSignificance
metacluster_1/pattern_00.017097099999999997
Klf1
Pattern NameModiscoSignificance
metacluster_1/pattern_00.0174196
metacluster_1/pattern_10.0262118
metacluster_1/pattern_110.00162347
Sall4
Pattern NameModiscoSignificance
metacluster_1/pattern_00.0236669
Klf15
Pattern NameModiscoSignificance
metacluster_1/pattern_00.0289692
metacluster_1/pattern_110.00947517
Srebf2
Pattern NameModiscoSignificance
metacluster_1/pattern_00.0400163
metacluster_1/pattern_40.017850099999999997
Egr3
Pattern NameModiscoSignificance
metacluster_1/pattern_00.0448555
metacluster_1/pattern_10.0418161
Gli3
Pattern NameModiscoSignificance
metacluster_1/pattern_10.0418161
Nrf1
Pattern NameModiscoSignificance
metacluster_1/pattern_24.45698e-09
Mef2c
Pattern NameModiscoSignificance
metacluster_1/pattern_34.3860000000000004e-11
Mef2a
Pattern NameModiscoSignificance
metacluster_1/pattern_36.81559e-07
Mef2d
Pattern NameModiscoSignificance
metacluster_1/pattern_34.8076e-07
Creb1
Pattern NameModiscoSignificance
metacluster_1/pattern_40.00197312
Atf1
Pattern NameModiscoSignificance
metacluster_1/pattern_40.027598400000000002
Creb5
Pattern NameModiscoSignificance
metacluster_1/pattern_40.00197065
Jdp2
Pattern NameModiscoSignificance
metacluster_1/pattern_40.00877495
metacluster_1/pattern_100.000127258
Atf7
Pattern NameModiscoSignificance
metacluster_1/pattern_40.00320682
Crem
Pattern NameModiscoSignificance
metacluster_1/pattern_40.00978863
Atf2
Pattern NameModiscoSignificance
metacluster_1/pattern_40.00404476
Tfe3
Pattern NameModiscoSignificance
metacluster_1/pattern_40.0310204
Tfec
Pattern NameModiscoSignificance
metacluster_1/pattern_40.036151499999999996
Srebf1
Pattern NameModiscoSignificance
metacluster_1/pattern_40.038769599999999994
Rxrb
Pattern NameModiscoSignificance
metacluster_1/pattern_40.011334100000000001
Usf1
Pattern NameModiscoSignificance
metacluster_1/pattern_40.023755900000000003
Tfeb
Pattern NameModiscoSignificance
metacluster_1/pattern_40.023755900000000003
Mlx
Pattern NameModiscoSignificance
metacluster_1/pattern_40.016640900000000004
Mitf
Pattern NameModiscoSignificance
metacluster_1/pattern_40.023755900000000003
Arntl
Pattern NameModiscoSignificance
metacluster_1/pattern_40.0426444
Bhlhe40
Pattern NameModiscoSignificance
metacluster_1/pattern_40.036151499999999996
Xbp1
Pattern NameModiscoSignificance
metacluster_1/pattern_40.020396400000000002
Usf2
Pattern NameModiscoSignificance
metacluster_1/pattern_40.0438825
metacluster_1/pattern_110.05951080000000001
metacluster_1/pattern_160.0548006
metacluster_1/pattern_210.0431594
metacluster_1/pattern_220.0222754
Tef
Pattern NameModiscoSignificance
metacluster_1/pattern_40.023755900000000003
metacluster_1/pattern_190.0510949
Clock
Pattern NameModiscoSignificance
metacluster_1/pattern_40.023755900000000003
Atf3
Pattern NameModiscoSignificance
metacluster_1/pattern_40.0433288
metacluster_1/pattern_101.1426999999999999e-06
Nfil3
Pattern NameModiscoSignificance
metacluster_1/pattern_40.023755900000000003
metacluster_1/pattern_170.0327955
metacluster_1/pattern_190.0326884
Jun
Pattern NameModiscoSignificance
metacluster_1/pattern_40.0255609
metacluster_1/pattern_100.0341635
Mafb
Pattern NameModiscoSignificance
metacluster_1/pattern_40.027598400000000002
Creb3l2
Pattern NameModiscoSignificance
metacluster_1/pattern_40.036151499999999996
Fosl2
Pattern NameModiscoSignificance
metacluster_1/pattern_40.047371300000000005
metacluster_1/pattern_100.000207962
Dbp
Pattern NameModiscoSignificance
metacluster_1/pattern_40.055203800000000004
metacluster_1/pattern_170.0452181
metacluster_1/pattern_190.037266900000000006
Gabpa
Pattern NameModiscoSignificance
metacluster_1/pattern_50.000455757
Fli1
Pattern NameModiscoSignificance
metacluster_1/pattern_50.00013215700000000002
metacluster_1/pattern_220.0222754
Ets1
Pattern NameModiscoSignificance
metacluster_1/pattern_50.00013215700000000002
Elk4
Pattern NameModiscoSignificance
metacluster_1/pattern_58.457540000000001e-05
Erg
Pattern NameModiscoSignificance
metacluster_1/pattern_50.000127712
Etv4
Pattern NameModiscoSignificance
metacluster_1/pattern_50.00634932
Elf1
Pattern NameModiscoSignificance
metacluster_1/pattern_53.00673e-05
Elk3
Pattern NameModiscoSignificance
metacluster_1/pattern_50.000117157
Elk1
Pattern NameModiscoSignificance
metacluster_1/pattern_53.3256900000000003e-05
Etv1
Pattern NameModiscoSignificance
metacluster_1/pattern_53.3256900000000003e-05
Etv5
Pattern NameModiscoSignificance
metacluster_1/pattern_50.000199908
Etv2
Pattern NameModiscoSignificance
metacluster_1/pattern_50.00033496599999999996
Fev
Pattern NameModiscoSignificance
metacluster_1/pattern_50.00048651099999999996
Etv3
Pattern NameModiscoSignificance
metacluster_1/pattern_50.00050984
Etv6
Pattern NameModiscoSignificance
metacluster_1/pattern_50.0266493
XP_911724.4
Pattern NameModiscoSignificance
metacluster_1/pattern_50.000628095
Elf4
Pattern NameModiscoSignificance
metacluster_1/pattern_50.00311374
Ehf
Pattern NameModiscoSignificance
metacluster_1/pattern_50.0145322
Elf2
Pattern NameModiscoSignificance
metacluster_1/pattern_50.00557058
Elf5
Pattern NameModiscoSignificance
metacluster_1/pattern_50.040706099999999995
Spi1
Pattern NameModiscoSignificance
metacluster_1/pattern_50.023533900000000003
Spdef
Pattern NameModiscoSignificance
metacluster_1/pattern_50.0454214
Elf3
Pattern NameModiscoSignificance
metacluster_1/pattern_50.0479756
Spib
Pattern NameModiscoSignificance
metacluster_1/pattern_50.042675300000000006
Nfyb
Pattern NameModiscoSignificance
metacluster_1/pattern_65.5947900000000003e-14
Nfyc
Pattern NameModiscoSignificance
metacluster_1/pattern_64.10742e-10
Nfya
Pattern NameModiscoSignificance
metacluster_1/pattern_64.17545e-09
Pbx3
Pattern NameModiscoSignificance
metacluster_1/pattern_63.5164999999999997e-06
Foxi1
Pattern NameModiscoSignificance
metacluster_1/pattern_66.413250000000001e-06
Ctcf
Pattern NameModiscoSignificance
metacluster_1/pattern_71.2953900000000002e-09
metacluster_1/pattern_210.0455711
Ctcfl
Pattern NameModiscoSignificance
metacluster_1/pattern_73.27741e-10
metacluster_1/pattern_210.00331431
metacluster_1/pattern_220.0358313
Rfx3
Pattern NameModiscoSignificance
metacluster_1/pattern_80.00900268
metacluster_1/pattern_150.00445199
Rfx2
Pattern NameModiscoSignificance
metacluster_1/pattern_84.901950000000001e-07
metacluster_1/pattern_151.0625799999999999e-06
Rfx1
Pattern NameModiscoSignificance
metacluster_1/pattern_81.7524799999999998e-07
metacluster_1/pattern_210.0448671
Rfx4
Pattern NameModiscoSignificance
metacluster_1/pattern_80.000186264
Rfx6
Pattern NameModiscoSignificance
metacluster_1/pattern_80.000248471
metacluster_1/pattern_150.00343422
Rfx7
Pattern NameModiscoSignificance
metacluster_1/pattern_80.00352514
metacluster_1/pattern_150.0420466
Yy1
Pattern NameModiscoSignificance
metacluster_1/pattern_91.71224e-05
Taf1
Pattern NameModiscoSignificance
metacluster_1/pattern_91.71224e-05
Zfp42
Pattern NameModiscoSignificance
metacluster_1/pattern_90.0182382
Mxi1
Pattern NameModiscoSignificance
metacluster_1/pattern_90.0253082
metacluster_1/pattern_220.0327865
Zfx
Pattern NameModiscoSignificance
metacluster_1/pattern_90.0541812
metacluster_1/pattern_110.0429794
metacluster_1/pattern_160.00361491
metacluster_1/pattern_210.022733
metacluster_1/pattern_220.049965699999999995
Junb
Pattern NameModiscoSignificance
metacluster_1/pattern_100.015411000000000001
Fosl1
Pattern NameModiscoSignificance
metacluster_1/pattern_102.19637e-07
Fosb
Pattern NameModiscoSignificance
metacluster_1/pattern_103.19376e-07
Fos
Pattern NameModiscoSignificance
metacluster_1/pattern_103.4066699999999996e-07
Jund
Pattern NameModiscoSignificance
metacluster_1/pattern_100.0051825000000000005
Batf
Pattern NameModiscoSignificance
metacluster_1/pattern_100.019165099999999997
Bach2
Pattern NameModiscoSignificance
metacluster_1/pattern_100.00276639
Nfe2l2
Pattern NameModiscoSignificance
metacluster_1/pattern_100.00711879
Nfe2
Pattern NameModiscoSignificance
metacluster_1/pattern_100.00679833
Bach1
Pattern NameModiscoSignificance
metacluster_1/pattern_100.00717351
Mafa
Pattern NameModiscoSignificance
metacluster_1/pattern_100.0332148
E2f7
Pattern NameModiscoSignificance
metacluster_1/pattern_110.0356052
Neurod2
Pattern NameModiscoSignificance
metacluster_1/pattern_124.988e-06
Neurod1
Pattern NameModiscoSignificance
metacluster_1/pattern_123.30018e-05
Neurog2
Pattern NameModiscoSignificance
metacluster_1/pattern_123.17911e-05
Olig2
Pattern NameModiscoSignificance
metacluster_1/pattern_120.00102017
Atoh1
Pattern NameModiscoSignificance
metacluster_1/pattern_120.00706569
Bhlhe22
Pattern NameModiscoSignificance
metacluster_1/pattern_120.00303067
Tcf21
Pattern NameModiscoSignificance
metacluster_1/pattern_120.00303067
Lyl1
Pattern NameModiscoSignificance
metacluster_1/pattern_120.00369186
Neurog1
Pattern NameModiscoSignificance
metacluster_1/pattern_120.00537127
Msc
Pattern NameModiscoSignificance
metacluster_1/pattern_120.00537127
Bhlha15
Pattern NameModiscoSignificance
metacluster_1/pattern_120.0152666
Msgn1
Pattern NameModiscoSignificance
metacluster_1/pattern_120.013022999999999998
Twist2
Pattern NameModiscoSignificance
metacluster_1/pattern_120.016828799999999998
Tal1
Pattern NameModiscoSignificance
metacluster_1/pattern_120.0255776
Tcf12
Pattern NameModiscoSignificance
metacluster_1/pattern_120.031653
Twist1
Pattern NameModiscoSignificance
metacluster_1/pattern_120.031653
Ascl1
Pattern NameModiscoSignificance
metacluster_1/pattern_120.031653
Myog
Pattern NameModiscoSignificance
metacluster_1/pattern_120.036245400000000004
Ptf1a
Pattern NameModiscoSignificance
metacluster_1/pattern_120.038988300000000004
Tfap4
Pattern NameModiscoSignificance
metacluster_1/pattern_120.0519653
Ascl2
Pattern NameModiscoSignificance
metacluster_1/pattern_120.0519653
Zfp143
Pattern NameModiscoSignificance
metacluster_1/pattern_132.43896e-20
Thap11
Pattern NameModiscoSignificance
metacluster_1/pattern_131.23473e-19
Tbx2
Pattern NameModiscoSignificance
metacluster_1/pattern_131.04441e-12
Nfib
Pattern NameModiscoSignificance
metacluster_1/pattern_140.00142611
Nfia
Pattern NameModiscoSignificance
metacluster_1/pattern_140.00179029
Nfic
Pattern NameModiscoSignificance
metacluster_1/pattern_140.00463683
Zbtb33
Pattern NameModiscoSignificance
metacluster_1/pattern_163.7973e-06
Cebpg
Pattern NameModiscoSignificance
metacluster_1/pattern_190.037266900000000006
Atf4
Pattern NameModiscoSignificance
metacluster_1/pattern_190.037266900000000006
Ddit3
Pattern NameModiscoSignificance
metacluster_1/pattern_190.0349779
Cebpd
Pattern NameModiscoSignificance
metacluster_1/pattern_190.0449074
Pou3f3
Pattern NameModiscoSignificance
metacluster_1/pattern_190.0326884
Hlf
Pattern NameModiscoSignificance
metacluster_1/pattern_190.0326884
Cebpb
Pattern NameModiscoSignificance
metacluster_1/pattern_190.040059
Pou5f1
Pattern NameModiscoSignificance
metacluster_1/pattern_190.037266900000000006
Pou2f2
Pattern NameModiscoSignificance
metacluster_1/pattern_190.04416919999999999
metacluster_1/pattern_200.000574922
Sox2
Pattern NameModiscoSignificance
metacluster_1/pattern_190.0408574
Cebpe
Pattern NameModiscoSignificance
metacluster_1/pattern_190.0408574
Cebpa
Pattern NameModiscoSignificance
metacluster_1/pattern_190.04416919999999999
Pou1f1
Pattern NameModiscoSignificance
metacluster_1/pattern_190.0556184
Pou2f1
Pattern NameModiscoSignificance
metacluster_1/pattern_200.00973375
Tfap2b
Pattern NameModiscoSignificance
metacluster_1/pattern_210.0232557
Mbd2
Pattern NameModiscoSignificance
metacluster_1/pattern_220.024568
In [6]:
display_paiwise_pattern_comparison(data_name, modisco_root, homer_root)
Number of CISBP TFs obtained by TF-MoDISco and Homer
Shared TFs between TF-MoDISco and Homer: #100
TF NameModiscoHomer
Olig2
Pattern NameModiscoSignificance
metacluster_1/pattern_120.00102017
Pattern NameHomerSignificance
motif15.motif0.000582149
Sp4
Pattern NameModiscoSignificance
metacluster_1/pattern_00.00140951
metacluster_1/pattern_110.0460269
Pattern NameHomerSignificance
motif1.motif0.0312824
Klf5
Pattern NameModiscoSignificance
metacluster_1/pattern_00.000649081
metacluster_1/pattern_110.0272587
Pattern NameHomerSignificance
motif1.motif0.017350599999999997
motif21.motif0.036099099999999995
Msgn1
Pattern NameModiscoSignificance
metacluster_1/pattern_120.013022999999999998
Pattern NameHomerSignificance
motif15.motif0.00737105
Nrf1
Pattern NameModiscoSignificance
metacluster_1/pattern_24.45698e-09
Pattern NameHomerSignificance
motif3.motif2.32928e-07
Klf6
Pattern NameModiscoSignificance
metacluster_1/pattern_00.00058344
metacluster_1/pattern_110.0006352290000000001
metacluster_1/pattern_210.00762142
metacluster_1/pattern_220.017904
Pattern NameHomerSignificance
motif1.motif0.020306499999999998
Atf2
Pattern NameModiscoSignificance
metacluster_1/pattern_40.00404476
Pattern NameHomerSignificance
motif13.motif0.0232186
Nfil3
Pattern NameModiscoSignificance
metacluster_1/pattern_40.023755900000000003
metacluster_1/pattern_170.0327955
metacluster_1/pattern_190.0326884
Pattern NameHomerSignificance
motif28.motif0.015151900000000001
Egr2
Pattern NameModiscoSignificance
metacluster_1/pattern_00.00479405
metacluster_1/pattern_10.0261171
metacluster_1/pattern_110.025575999999999998
Pattern NameHomerSignificance
motif1.motif0.056361400000000006
Rfx6
Pattern NameModiscoSignificance
metacluster_1/pattern_80.000248471
metacluster_1/pattern_150.00343422
Pattern NameHomerSignificance
motif10.motif0.03996
Etv1
Pattern NameModiscoSignificance
metacluster_1/pattern_53.3256900000000003e-05
Pattern NameHomerSignificance
motif5.motif0.0482902
Sp1
Pattern NameModiscoSignificance
metacluster_1/pattern_00.00132168
metacluster_1/pattern_90.0327693
metacluster_1/pattern_110.0249872
metacluster_1/pattern_210.0012406
metacluster_1/pattern_220.00186501
Pattern NameHomerSignificance
motif1.motif0.0101418
Taf1
Pattern NameModiscoSignificance
metacluster_1/pattern_91.71224e-05
Pattern NameHomerSignificance
motif26.motif0.010125499999999999
Rfx4
Pattern NameModiscoSignificance
metacluster_1/pattern_80.000186264
Pattern NameHomerSignificance
motif10.motif0.0002158
Ctcfl
Pattern NameModiscoSignificance
metacluster_1/pattern_73.27741e-10
metacluster_1/pattern_210.00331431
metacluster_1/pattern_220.0358313
Pattern NameHomerSignificance
motif6.motif0.00367281
Bach2
Pattern NameModiscoSignificance
metacluster_1/pattern_100.00276639
Pattern NameHomerSignificance
motif7.motif5.6674399999999994e-05
Mafb
Pattern NameModiscoSignificance
metacluster_1/pattern_40.027598400000000002
Pattern NameHomerSignificance
motif7.motif0.0266015
Neurod1
Pattern NameModiscoSignificance
metacluster_1/pattern_123.30018e-05
Pattern NameHomerSignificance
motif15.motif0.000582149
Jun
Pattern NameModiscoSignificance
metacluster_1/pattern_40.0255609
metacluster_1/pattern_100.0341635
Pattern NameHomerSignificance
motif7.motif0.018710499999999998
Neurog2
Pattern NameModiscoSignificance
metacluster_1/pattern_123.17911e-05
Pattern NameHomerSignificance
motif15.motif0.00223888
Neurog1
Pattern NameModiscoSignificance
metacluster_1/pattern_120.00537127
Pattern NameHomerSignificance
motif15.motif0.00211887
Elk1
Pattern NameModiscoSignificance
metacluster_1/pattern_53.3256900000000003e-05
Pattern NameHomerSignificance
motif5.motif0.0398983
Klf3
Pattern NameModiscoSignificance
metacluster_1/pattern_02.7386999999999995e-07
metacluster_1/pattern_110.000329578
metacluster_1/pattern_210.004318
metacluster_1/pattern_220.0222754
Pattern NameHomerSignificance
motif1.motif0.00219172
Elf1
Pattern NameModiscoSignificance
metacluster_1/pattern_53.00673e-05
Pattern NameHomerSignificance
motif5.motif0.0032235999999999996
Nfe2l2
Pattern NameModiscoSignificance
metacluster_1/pattern_100.00711879
Pattern NameHomerSignificance
motif7.motif4.12932e-05
Klf7
Pattern NameModiscoSignificance
metacluster_1/pattern_00.00235191
metacluster_1/pattern_110.032003
Pattern NameHomerSignificance
motif1.motif0.000943015
Atf3
Pattern NameModiscoSignificance
metacluster_1/pattern_40.0433288
metacluster_1/pattern_101.1426999999999999e-06
Pattern NameHomerSignificance
motif7.motif0.00107059
Etv5
Pattern NameModiscoSignificance
metacluster_1/pattern_50.000199908
Pattern NameHomerSignificance
motif5.motif0.0398983
Yy1
Pattern NameModiscoSignificance
metacluster_1/pattern_91.71224e-05
Pattern NameHomerSignificance
motif26.motif0.000587308
Ptf1a
Pattern NameModiscoSignificance
metacluster_1/pattern_120.038988300000000004
Pattern NameHomerSignificance
motif15.motif0.0147827
Etv6
Pattern NameModiscoSignificance
metacluster_1/pattern_50.0266493
Pattern NameHomerSignificance
motif5.motif0.0482902
Creb5
Pattern NameModiscoSignificance
metacluster_1/pattern_40.00197065
Pattern NameHomerSignificance
motif13.motif0.0121975
Klf4
Pattern NameModiscoSignificance
metacluster_1/pattern_00.00339213
metacluster_1/pattern_110.0447199
Pattern NameHomerSignificance
motif1.motif0.000943015
Fev
Pattern NameModiscoSignificance
metacluster_1/pattern_50.00048651099999999996
Pattern NameHomerSignificance
motif5.motif0.0398983
Mef2c
Pattern NameModiscoSignificance
metacluster_1/pattern_34.3860000000000004e-11
Pattern NameHomerSignificance
motif12.motif6.39782e-11
Creb1
Pattern NameModiscoSignificance
metacluster_1/pattern_40.00197312
Pattern NameHomerSignificance
motif13.motif0.0202266
Spi1
Pattern NameModiscoSignificance
metacluster_1/pattern_50.023533900000000003
Pattern NameHomerSignificance
motif5.motif0.0398983
Elk4
Pattern NameModiscoSignificance
metacluster_1/pattern_58.457540000000001e-05
Pattern NameHomerSignificance
motif5.motif0.057783600000000004
Foxi1
Pattern NameModiscoSignificance
metacluster_1/pattern_66.413250000000001e-06
Pattern NameHomerSignificance
motif8.motif3.3866000000000003e-06
Klf1
Pattern NameModiscoSignificance
metacluster_1/pattern_00.0174196
metacluster_1/pattern_10.0262118
metacluster_1/pattern_110.00162347
Pattern NameHomerSignificance
motif1.motif0.039636300000000006
Rfx7
Pattern NameModiscoSignificance
metacluster_1/pattern_80.00352514
metacluster_1/pattern_150.0420466
Pattern NameHomerSignificance
motif10.motif0.0195737
Klf12
Pattern NameModiscoSignificance
metacluster_1/pattern_00.0065667
metacluster_1/pattern_110.0460269
Pattern NameHomerSignificance
motif1.motif0.031888799999999995
Fli1
Pattern NameModiscoSignificance
metacluster_1/pattern_50.00013215700000000002
metacluster_1/pattern_220.0222754
Pattern NameHomerSignificance
motif5.motif0.0205824
Sp2
Pattern NameModiscoSignificance
metacluster_1/pattern_01.55274e-09
metacluster_1/pattern_90.017997700000000002
metacluster_1/pattern_111.91436e-07
metacluster_1/pattern_218.86632e-05
metacluster_1/pattern_220.000204507
Pattern NameHomerSignificance
motif1.motif0.000943015
Thap11
Pattern NameModiscoSignificance
metacluster_1/pattern_131.23473e-19
Pattern NameHomerSignificance
motif2.motif3.5049599999999996e-06
Nfe2
Pattern NameModiscoSignificance
metacluster_1/pattern_100.00679833
Pattern NameHomerSignificance
motif7.motif8.95337e-06
Etv4
Pattern NameModiscoSignificance
metacluster_1/pattern_50.00634932
Pattern NameHomerSignificance
motif5.motif0.0398983
Ehf
Pattern NameModiscoSignificance
metacluster_1/pattern_50.0145322
Pattern NameHomerSignificance
motif5.motif0.0558403
Pbx3
Pattern NameModiscoSignificance
metacluster_1/pattern_63.5164999999999997e-06
Pattern NameHomerSignificance
motif8.motif9.471860000000001e-05
Bhlhe22
Pattern NameModiscoSignificance
metacluster_1/pattern_120.00303067
Pattern NameHomerSignificance
motif15.motif0.00130422
Tcf21
Pattern NameModiscoSignificance
metacluster_1/pattern_120.00303067
Pattern NameHomerSignificance
motif15.motif0.0009417989999999999
Jdp2
Pattern NameModiscoSignificance
metacluster_1/pattern_40.00877495
metacluster_1/pattern_100.000127258
Pattern NameHomerSignificance
motif7.motif4.12932e-05
motif13.motif0.046380000000000005
Nfya
Pattern NameModiscoSignificance
metacluster_1/pattern_64.17545e-09
Pattern NameHomerSignificance
motif8.motif7.361839999999999e-07
Ctcf
Pattern NameModiscoSignificance
metacluster_1/pattern_71.2953900000000002e-09
metacluster_1/pattern_210.0455711
Pattern NameHomerSignificance
motif6.motif0.000758532
Atf7
Pattern NameModiscoSignificance
metacluster_1/pattern_40.00320682
Pattern NameHomerSignificance
motif13.motif0.0232186
Lyl1
Pattern NameModiscoSignificance
metacluster_1/pattern_120.00369186
Pattern NameHomerSignificance
motif15.motif0.00211887
Mef2d
Pattern NameModiscoSignificance
metacluster_1/pattern_34.8076e-07
Pattern NameHomerSignificance
motif12.motif1.34321e-11
Rfx2
Pattern NameModiscoSignificance
metacluster_1/pattern_84.901950000000001e-07
metacluster_1/pattern_151.0625799999999999e-06
Pattern NameHomerSignificance
motif10.motif1.0760899999999999e-05
Tbx2
Pattern NameModiscoSignificance
metacluster_1/pattern_131.04441e-12
Pattern NameHomerSignificance
motif2.motif3.43213e-05
Egr1
Pattern NameModiscoSignificance
metacluster_1/pattern_00.0400163
metacluster_1/pattern_10.00697731
metacluster_1/pattern_110.030411
Pattern NameHomerSignificance
motif1.motif0.020306499999999998
Zbtb33
Pattern NameModiscoSignificance
metacluster_1/pattern_163.7973e-06
Pattern NameHomerSignificance
motif20.motif3.0034699999999997e-06
Fosl2
Pattern NameModiscoSignificance
metacluster_1/pattern_40.047371300000000005
metacluster_1/pattern_100.000207962
Pattern NameHomerSignificance
motif7.motif0.00163188
Klf8
Pattern NameModiscoSignificance
metacluster_1/pattern_00.00552762
metacluster_1/pattern_110.041389300000000004
Pattern NameHomerSignificance
motif1.motif0.00123922
Sp3
Pattern NameModiscoSignificance
metacluster_1/pattern_03.442990000000001e-10
metacluster_1/pattern_90.0253082
metacluster_1/pattern_113.12274e-07
metacluster_1/pattern_210.00104591
metacluster_1/pattern_220.00102963
Pattern NameHomerSignificance
motif1.motif0.000943015
Erg
Pattern NameModiscoSignificance
metacluster_1/pattern_50.000127712
Pattern NameHomerSignificance
motif5.motif0.0249431
E2f4
Pattern NameModiscoSignificance
metacluster_1/pattern_00.00109259
metacluster_1/pattern_110.032003
Pattern NameHomerSignificance
motif1.motif0.00123922
Zfp42
Pattern NameModiscoSignificance
metacluster_1/pattern_90.0182382
Pattern NameHomerSignificance
motif26.motif0.010125499999999999
E2f1
Pattern NameModiscoSignificance
metacluster_1/pattern_00.017097099999999997
Pattern NameHomerSignificance
motif1.motif0.039921
Elk3
Pattern NameModiscoSignificance
metacluster_1/pattern_50.000117157
Pattern NameHomerSignificance
motif5.motif0.0398983
Wt1
Pattern NameModiscoSignificance
metacluster_1/pattern_00.000649081
metacluster_1/pattern_110.00639371
metacluster_1/pattern_210.045880000000000004
metacluster_1/pattern_220.0327865
Pattern NameHomerSignificance
motif21.motif0.036099099999999995
Junb
Pattern NameModiscoSignificance
metacluster_1/pattern_100.015411000000000001
Pattern NameHomerSignificance
motif7.motif0.0141946
Elf5
Pattern NameModiscoSignificance
metacluster_1/pattern_50.040706099999999995
Pattern NameHomerSignificance
motif5.motif0.0205824
Jund
Pattern NameModiscoSignificance
metacluster_1/pattern_100.0051825000000000005
Pattern NameHomerSignificance
motif7.motif0.00113737
Neurod2
Pattern NameModiscoSignificance
metacluster_1/pattern_124.988e-06
Pattern NameHomerSignificance
motif15.motif0.000582149
Bhlha15
Pattern NameModiscoSignificance
metacluster_1/pattern_120.0152666
Pattern NameHomerSignificance
motif15.motif0.00047420599999999997
Rfx3
Pattern NameModiscoSignificance
metacluster_1/pattern_80.00900268
metacluster_1/pattern_150.00445199
Pattern NameHomerSignificance
motif10.motif0.04568730000000001
Zfp143
Pattern NameModiscoSignificance
metacluster_1/pattern_132.43896e-20
Pattern NameHomerSignificance
motif2.motif3.5049599999999996e-06
Atf1
Pattern NameModiscoSignificance
metacluster_1/pattern_40.027598400000000002
Pattern NameHomerSignificance
motif13.motif0.0408967
Mafa
Pattern NameModiscoSignificance
metacluster_1/pattern_100.0332148
Pattern NameHomerSignificance
motif7.motif0.018710499999999998
Crem
Pattern NameModiscoSignificance
metacluster_1/pattern_40.00978863
Pattern NameHomerSignificance
motif13.motif0.0161179
Hlf
Pattern NameModiscoSignificance
metacluster_1/pattern_190.0326884
Pattern NameHomerSignificance
motif28.motif0.051285199999999996
Fosl1
Pattern NameModiscoSignificance
metacluster_1/pattern_102.19637e-07
Pattern NameHomerSignificance
motif7.motif0.0091661
Fos
Pattern NameModiscoSignificance
metacluster_1/pattern_103.4066699999999996e-07
Pattern NameHomerSignificance
motif7.motif0.000123915
Rfx1
Pattern NameModiscoSignificance
metacluster_1/pattern_81.7524799999999998e-07
metacluster_1/pattern_210.0448671
Pattern NameHomerSignificance
motif10.motif6.242659999999999e-06
Dbp
Pattern NameModiscoSignificance
metacluster_1/pattern_40.055203800000000004
metacluster_1/pattern_170.0452181
metacluster_1/pattern_190.037266900000000006
Pattern NameHomerSignificance
motif28.motif0.0447324
Mef2a
Pattern NameModiscoSignificance
metacluster_1/pattern_36.81559e-07
Pattern NameHomerSignificance
motif12.motif1.3206799999999998e-06
Nfyc
Pattern NameModiscoSignificance
metacluster_1/pattern_64.10742e-10
Pattern NameHomerSignificance
motif8.motif1.2716500000000001e-06
Msc
Pattern NameModiscoSignificance
metacluster_1/pattern_120.00537127
Pattern NameHomerSignificance
motif15.motif0.00326297
Batf
Pattern NameModiscoSignificance
metacluster_1/pattern_100.019165099999999997
Pattern NameHomerSignificance
motif7.motif0.00409738
Atoh1
Pattern NameModiscoSignificance
metacluster_1/pattern_120.00706569
Pattern NameHomerSignificance
motif15.motif0.0393953
Fosb
Pattern NameModiscoSignificance
metacluster_1/pattern_103.19376e-07
Pattern NameHomerSignificance
motif7.motif0.000625886
Gabpa
Pattern NameModiscoSignificance
metacluster_1/pattern_50.000455757
Pattern NameHomerSignificance
motif5.motif0.0398983
motif22.motif0.0457679
Zfx
Pattern NameModiscoSignificance
metacluster_1/pattern_90.0541812
metacluster_1/pattern_110.0429794
metacluster_1/pattern_160.00361491
metacluster_1/pattern_210.022733
metacluster_1/pattern_220.049965699999999995
Pattern NameHomerSignificance
motif1.motif0.056361400000000006
Twist2
Pattern NameModiscoSignificance
metacluster_1/pattern_120.016828799999999998
Pattern NameHomerSignificance
motif15.motif0.013127100000000001
Sall4
Pattern NameModiscoSignificance
metacluster_1/pattern_00.0236669
Pattern NameHomerSignificance
motif21.motif0.05536669999999999
Nfyb
Pattern NameModiscoSignificance
metacluster_1/pattern_65.5947900000000003e-14
Pattern NameHomerSignificance
motif8.motif4.66662e-08
Bach1
Pattern NameModiscoSignificance
metacluster_1/pattern_100.00717351
Pattern NameHomerSignificance
motif7.motif0.00046886800000000005
Elf4
Pattern NameModiscoSignificance
metacluster_1/pattern_50.00311374
Pattern NameHomerSignificance
motif5.motif0.0482902
Ets1
Pattern NameModiscoSignificance
metacluster_1/pattern_50.00013215700000000002
Pattern NameHomerSignificance
motif5.motif0.025912900000000003
Elf2
Pattern NameModiscoSignificance
metacluster_1/pattern_50.00557058
Pattern NameHomerSignificance
motif5.motif0.0398983
Unique TF-MoDISco TFs: #56
TF NameModiscoHomer
Nfib
Pattern NameModiscoSignificance
metacluster_1/pattern_140.00142611
Absent
Xbp1
Pattern NameModiscoSignificance
metacluster_1/pattern_40.020396400000000002
Absent
Zfp281
Pattern NameModiscoSignificance
metacluster_1/pattern_00.0400163
metacluster_1/pattern_10.047355
metacluster_1/pattern_110.037057
Absent
Creb3l2
Pattern NameModiscoSignificance
metacluster_1/pattern_40.036151499999999996
Absent
E2f7
Pattern NameModiscoSignificance
metacluster_1/pattern_110.0356052
Absent
Spib
Pattern NameModiscoSignificance
metacluster_1/pattern_50.042675300000000006
Absent
Usf2
Pattern NameModiscoSignificance
metacluster_1/pattern_40.0438825
metacluster_1/pattern_110.05951080000000001
metacluster_1/pattern_160.0548006
metacluster_1/pattern_210.0431594
metacluster_1/pattern_220.0222754
Absent
Sox2
Pattern NameModiscoSignificance
metacluster_1/pattern_190.0408574
Absent
Bhlhe40
Pattern NameModiscoSignificance
metacluster_1/pattern_40.036151499999999996
Absent
Atf4
Pattern NameModiscoSignificance
metacluster_1/pattern_190.037266900000000006
Absent
Mxi1
Pattern NameModiscoSignificance
metacluster_1/pattern_90.0253082
metacluster_1/pattern_220.0327865
Absent
Gli3
Pattern NameModiscoSignificance
metacluster_1/pattern_10.0418161
Absent
Etv2
Pattern NameModiscoSignificance
metacluster_1/pattern_50.00033496599999999996
Absent
Tef
Pattern NameModiscoSignificance
metacluster_1/pattern_40.023755900000000003
metacluster_1/pattern_190.0510949
Absent
Twist1
Pattern NameModiscoSignificance
metacluster_1/pattern_120.031653
Absent
Tfec
Pattern NameModiscoSignificance
metacluster_1/pattern_40.036151499999999996
Absent
Ddit3
Pattern NameModiscoSignificance
metacluster_1/pattern_190.0349779
Absent
Ascl2
Pattern NameModiscoSignificance
metacluster_1/pattern_120.0519653
Absent
Mlx
Pattern NameModiscoSignificance
metacluster_1/pattern_40.016640900000000004
Absent
Cebpd
Pattern NameModiscoSignificance
metacluster_1/pattern_190.0449074
Absent
Rxrb
Pattern NameModiscoSignificance
metacluster_1/pattern_40.011334100000000001
Absent
Mitf
Pattern NameModiscoSignificance
metacluster_1/pattern_40.023755900000000003
Absent
Pou1f1
Pattern NameModiscoSignificance
metacluster_1/pattern_190.0556184
Absent
Pou3f3
Pattern NameModiscoSignificance
metacluster_1/pattern_190.0326884
Absent
Myog
Pattern NameModiscoSignificance
metacluster_1/pattern_120.036245400000000004
Absent
Tal1
Pattern NameModiscoSignificance
metacluster_1/pattern_120.0255776
Absent
Etv3
Pattern NameModiscoSignificance
metacluster_1/pattern_50.00050984
Absent
Zbtb17
Pattern NameModiscoSignificance
metacluster_1/pattern_00.000741338
metacluster_1/pattern_10.0157779
metacluster_1/pattern_110.00930838
metacluster_1/pattern_210.0232557
metacluster_1/pattern_220.0543351
Absent
Nfia
Pattern NameModiscoSignificance
metacluster_1/pattern_140.00179029
Absent
Srebf2
Pattern NameModiscoSignificance
metacluster_1/pattern_00.0400163
metacluster_1/pattern_40.017850099999999997
Absent
Sp5
Pattern NameModiscoSignificance
metacluster_1/pattern_00.000649081
metacluster_1/pattern_110.0249872
Absent
Usf1
Pattern NameModiscoSignificance
metacluster_1/pattern_40.023755900000000003
Absent
Nfic
Pattern NameModiscoSignificance
metacluster_1/pattern_140.00463683
Absent
Pou5f1
Pattern NameModiscoSignificance
metacluster_1/pattern_190.037266900000000006
Absent
Maz
Pattern NameModiscoSignificance
metacluster_1/pattern_00.00541482
metacluster_1/pattern_110.00471632
Absent
Spdef
Pattern NameModiscoSignificance
metacluster_1/pattern_50.0454214
Absent
Tfap4
Pattern NameModiscoSignificance
metacluster_1/pattern_120.0519653
Absent
Arntl
Pattern NameModiscoSignificance
metacluster_1/pattern_40.0426444
Absent
Ascl1
Pattern NameModiscoSignificance
metacluster_1/pattern_120.031653
Absent
Tfap2b
Pattern NameModiscoSignificance
metacluster_1/pattern_210.0232557
Absent
Cebpg
Pattern NameModiscoSignificance
metacluster_1/pattern_190.037266900000000006
Absent
Clock
Pattern NameModiscoSignificance
metacluster_1/pattern_40.023755900000000003
Absent
Elf3
Pattern NameModiscoSignificance
metacluster_1/pattern_50.0479756
Absent
Pou2f2
Pattern NameModiscoSignificance
metacluster_1/pattern_190.04416919999999999
metacluster_1/pattern_200.000574922
Absent
Srebf1
Pattern NameModiscoSignificance
metacluster_1/pattern_40.038769599999999994
Absent
Cebpb
Pattern NameModiscoSignificance
metacluster_1/pattern_190.040059
Absent
Cebpa
Pattern NameModiscoSignificance
metacluster_1/pattern_190.04416919999999999
Absent
Tfeb
Pattern NameModiscoSignificance
metacluster_1/pattern_40.023755900000000003
Absent
XP_911724.4
Pattern NameModiscoSignificance
metacluster_1/pattern_50.000628095
Absent
Cebpe
Pattern NameModiscoSignificance
metacluster_1/pattern_190.0408574
Absent
Klf15
Pattern NameModiscoSignificance
metacluster_1/pattern_00.0289692
metacluster_1/pattern_110.00947517
Absent
Tcf12
Pattern NameModiscoSignificance
metacluster_1/pattern_120.031653
Absent
Tfe3
Pattern NameModiscoSignificance
metacluster_1/pattern_40.0310204
Absent
Egr3
Pattern NameModiscoSignificance
metacluster_1/pattern_00.0448555
metacluster_1/pattern_10.0418161
Absent
Pou2f1
Pattern NameModiscoSignificance
metacluster_1/pattern_200.00973375
Absent
Mbd2
Pattern NameModiscoSignificance
metacluster_1/pattern_220.024568
Absent
Unique Homer TFs: #4
TF NameModiscoHomer
MafkAbsent
Pattern NameHomerSignificance
motif7.motif0.0246058
MafgAbsent
Pattern NameHomerSignificance
motif7.motif0.05672340000000001
Zbtb1Absent
Pattern NameHomerSignificance
motif1.motif0.04137419999999999
MafAbsent
Pattern NameHomerSignificance
motif7.motif0.057255099999999996