In [1]:
# Parameters
data_name = "Heart;8wks;D;En"
modisco_root = "/srv/scratch/msharmin/mouse_hem/with_tfd/full_mouse50/Naive_modisco2019"
tomtom_report_root = "http://mitra.stanford.edu/kundaje/msharmin/report/tomtom_outs/cells"
task_dir = "task_230-naivegw"
perf_file = "/srv/scratch/msharmin/mouse_hem/with_tfd/full_mouse50/fineFactorized/task_230-naivegw/NaiveauPRC.txt"
homer_root = "/srv/scratch/msharmin/mouse_hem/with_tfd/full_mouse50/Naive_scans"
reportfile = "/mnt/lab_data/kundaje/msharmin/annotations/filtering samples_MS2.xlsx"
sheetname = "filter23"
In [2]:
from matlas.reports import display_metadata
load data from labcluster
Using TensorFlow backend.
2019-08-30 19:32:15,779 [WARNING] git-lfs not installed
In [3]:
display_metadata(data_name, perf_file, reportfile, sheetname)
    Sample Information
    MetaData NameDescription
    Cell typeHeart (adult-8wks)
    Cell GroupOther Tissues
    Experiment NameDHS
    Experiment GroupENCODE
    Pipeline Output
    replicateNaïve overlap peaksIDR peaksTSS enrichment (< 8 is very poor <10 is low)Final number of unique mapping, dup-filtered, chrM filtered readsNumber of reads in called peak regionsFraction of reads in called peak regionsNumber of reads in promoter regionsFraction of reads in promoter regionsNumber of reads in enhancer regionsFraction of reads in enhancer regions
    rep12166381648626.7714231063522NANANANANANA
    Modelling Metadata
    MetricValue
    auPRC0.5425
    Calibrated Recall at 50% FDR0.27
    Number of Positive Examples in Test Data85252
    Number of Negative Examples in Test Data7985599
    Imbalance Ratio in Test Data0.0106
    Test Chromosomeschr2, chr3, chr19
In [4]:
from matlas.reports import display_paiwise_pattern_comparison
from matlas.reports import display_denovo_patterns
In [5]:
display_denovo_patterns(data_name, modisco_root=modisco_root)
TF-MoDISco is using the TensorFlow backend.
The following two links show list of Denovo Patterns and corresponding Motifs discovered by TF-MoDISco
Click here for Denovo Patterns by TF-MoDISco: #20
Pattern NameTF Name(s)Modisco
metacluster_0/pattern_0 # seqlets: 2897 SequenceContrib ScoresHyp_Contrib Scores
Ctcf, Ctcfl
metacluster_0/pattern_1 # seqlets: 2675 SequenceContrib ScoresHyp_Contrib Scores
Sp4, Sp2, Sp3, Klf3, Sp1, E2f4, Klf6, Klf7, Klf4, Klf1,

Klf8, Egr1, Klf12, Zbtb17, E2f1, Egr2, Klf5, Sp5, Zfp281, Zfx, Wt1
metacluster_0/pattern_2 # seqlets: 2529 SequenceContrib ScoresHyp_Contrib Scores
Ets1, Erg, Fli1, Elk4, Gabpa, Elk1, Etv4, Etv2, Etv5, Elk3,

Fev, Etv6, Etv1, Elf2, Spi1, Etv3, XP_911724.4, Elf1, Elf4, Ehf, Elf5,

Spib, Elf3, Spdef, Spic, Irf8, Irf4
metacluster_0/pattern_3 # seqlets: 1553 SequenceContrib ScoresHyp_Contrib Scores
Nfib, Nfia, Nfic
metacluster_0/pattern_4 # seqlets: 1390 SequenceContrib ScoresHyp_Contrib Scores
Nrf1
metacluster_0/pattern_5 # seqlets: 1343 SequenceContrib ScoresHyp_Contrib Scores
Mef2d, Mef2a, Mef2c
metacluster_0/pattern_6 # seqlets: 1022 SequenceContrib ScoresHyp_Contrib Scores
Nfyb, Nfyc, Nfya, Foxi1, Pbx3
metacluster_0/pattern_7 # seqlets: 1009 SequenceContrib ScoresHyp_Contrib Scores
Creb1, Atf7, Atf2, Crem, Jdp2, Creb5, Atf1, Atf3, Fosl2, Jun,

Tfe3
metacluster_0/pattern_8 # seqlets: 862 SequenceContrib ScoresHyp_Contrib Scores
Usf1, Usf2, Tfeb, Tfec, Arntl, Mitf, Bhlhe40, Srebf1, Clock, Mlx,

Arnt, Npas2, Creb3l2, Srebf2, Tcfl5, Bhlhe41, Hes1, Xbp1, Mycn, Mlxip, Max,

Hlf, Arnt2, Dbp
metacluster_0/pattern_9 # seqlets: 741 SequenceContrib ScoresHyp_Contrib Scores
Taf1, Yy1, Rfx1, Zfp42, Maz, Mxi1, Klf15
metacluster_0/pattern_10 # seqlets: 655 SequenceContrib ScoresHyp_Contrib Scores
Cebpb, Cebpd, Cebpa, Cebpg, Cebpe, Tef, Nfil3, Atf4, Gmeb2, Ddit3,

Jund
metacluster_0/pattern_11 # seqlets: 540 SequenceContrib ScoresHyp_Contrib Scores
Atoh1, Lyl1, Bhlha15, Ptf1a, Ascl1, Olig2, Figla, Tfap4, Snai1, Neurod1,

Neurod2, Tcf3, Ascl2, Myog, Twist1, Tcf12, Tcf7l1, Tal1, Tcf4, Neurog2, Tgif1,

Myf5, Myod1, Tcf21, Msc, Myf6, Meis2
metacluster_0/pattern_12 # seqlets: 402 SequenceContrib ScoresHyp_Contrib Scores
Bach2, Fos, Nfe2l2, Fosl1, Nfe2, Fosb, Junb, Bach1, Batf, Mafa,

Mafk, Mafb
metacluster_0/pattern_13 # seqlets: 330 SequenceContrib ScoresHyp_Contrib Scores
Rfx3, Rfx2, Rfx4, Rfx7, Rfx6
metacluster_0/pattern_14 # seqlets: 329 SequenceContrib ScoresHyp_Contrib Scores
Thap11, Zfp143, Tbx2
metacluster_0/pattern_15 # seqlets: 309 SequenceContrib ScoresHyp_Contrib Scores
Irf1, Irf2, Irf7, Stat2, Irf9, Stat1, Prdm1, Irf5, Irf3, Irf6
metacluster_0/pattern_16 # seqlets: 186 SequenceContrib ScoresHyp_Contrib Scores
Esrrg, Esrrb, Nr5a2, Nr4a2, Rarb, Esrra, Nr1h3, Nr2f1, Rarg, Nr2f2,

Rara, Nr5a1, Rxrg, Rxra, Nr2f6, Rxrb, Pparg, Nr2c2, Ppara, Nr2c1, Rora
metacluster_0/pattern_17 # seqlets: 153 SequenceContrib ScoresHyp_Contrib Scores
Zbtb33
metacluster_0/pattern_18 # seqlets: 130 SequenceContrib ScoresHyp_Contrib Scores
Gata6, Gata1, Gata2, Gata4, Gata3, Gata5
metacluster_0/pattern_19 # seqlets: 68 SequenceContrib ScoresHyp_Contrib Scores
Click here for Motifs by TF-MoDISco: #200
TF NamePattern(s)
Ctcf
Pattern NameModiscoSignificance
metacluster_0/pattern_01.1150999999999998e-09
Ctcfl
Pattern NameModiscoSignificance
metacluster_0/pattern_03.7547299999999997e-10
Sp4
Pattern NameModiscoSignificance
metacluster_0/pattern_10.00247818
Sp2
Pattern NameModiscoSignificance
metacluster_0/pattern_11.56217e-06
metacluster_0/pattern_91.9181300000000002e-05
metacluster_0/pattern_170.0101473
Sp3
Pattern NameModiscoSignificance
metacluster_0/pattern_13.58284e-06
metacluster_0/pattern_90.000449419
metacluster_0/pattern_170.0195249
Klf3
Pattern NameModiscoSignificance
metacluster_0/pattern_11.94024e-05
metacluster_0/pattern_90.046805
Sp1
Pattern NameModiscoSignificance
metacluster_0/pattern_10.000871055
metacluster_0/pattern_97.32659e-05
E2f4
Pattern NameModiscoSignificance
metacluster_0/pattern_10.000634214
Klf6
Pattern NameModiscoSignificance
metacluster_0/pattern_10.000769122
Klf7
Pattern NameModiscoSignificance
metacluster_0/pattern_10.000871055
Klf4
Pattern NameModiscoSignificance
metacluster_0/pattern_10.0182781
Klf1
Pattern NameModiscoSignificance
metacluster_0/pattern_10.0207053
Klf8
Pattern NameModiscoSignificance
metacluster_0/pattern_10.00175065
Egr1
Pattern NameModiscoSignificance
metacluster_0/pattern_10.00332781
metacluster_0/pattern_90.054882900000000005
Klf12
Pattern NameModiscoSignificance
metacluster_0/pattern_10.0210767
Zbtb17
Pattern NameModiscoSignificance
metacluster_0/pattern_10.00461247
metacluster_0/pattern_90.00313243
E2f1
Pattern NameModiscoSignificance
metacluster_0/pattern_10.00842386
Egr2
Pattern NameModiscoSignificance
metacluster_0/pattern_10.0113352
metacluster_0/pattern_90.051937
Klf5
Pattern NameModiscoSignificance
metacluster_0/pattern_10.017159099999999997
Sp5
Pattern NameModiscoSignificance
metacluster_0/pattern_10.019021700000000002
Zfp281
Pattern NameModiscoSignificance
metacluster_0/pattern_10.0267308
Zfx
Pattern NameModiscoSignificance
metacluster_0/pattern_10.0277712
metacluster_0/pattern_90.046805
metacluster_0/pattern_170.0101473
Wt1
Pattern NameModiscoSignificance
metacluster_0/pattern_10.053816699999999995
metacluster_0/pattern_90.016170900000000002
Ets1
Pattern NameModiscoSignificance
metacluster_0/pattern_20.000456839
Erg
Pattern NameModiscoSignificance
metacluster_0/pattern_20.000456839
Fli1
Pattern NameModiscoSignificance
metacluster_0/pattern_20.000456839
Elk4
Pattern NameModiscoSignificance
metacluster_0/pattern_20.000456839
Gabpa
Pattern NameModiscoSignificance
metacluster_0/pattern_20.000456839
Elk1
Pattern NameModiscoSignificance
metacluster_0/pattern_20.000456839
Etv4
Pattern NameModiscoSignificance
metacluster_0/pattern_20.000456839
Etv2
Pattern NameModiscoSignificance
metacluster_0/pattern_26.28624e-05
Etv5
Pattern NameModiscoSignificance
metacluster_0/pattern_27.66451e-05
Elk3
Pattern NameModiscoSignificance
metacluster_0/pattern_20.000456839
Fev
Pattern NameModiscoSignificance
metacluster_0/pattern_20.000302976
Etv6
Pattern NameModiscoSignificance
metacluster_0/pattern_20.000598565
Etv1
Pattern NameModiscoSignificance
metacluster_0/pattern_20.000456839
Elf2
Pattern NameModiscoSignificance
metacluster_0/pattern_20.00599109
Spi1
Pattern NameModiscoSignificance
metacluster_0/pattern_20.0377315
Etv3
Pattern NameModiscoSignificance
metacluster_0/pattern_20.0005371369999999999
XP_911724.4
Pattern NameModiscoSignificance
metacluster_0/pattern_20.000582974
Elf1
Pattern NameModiscoSignificance
metacluster_0/pattern_20.00102205
Elf4
Pattern NameModiscoSignificance
metacluster_0/pattern_20.00370317
Ehf
Pattern NameModiscoSignificance
metacluster_0/pattern_20.00594861
Elf5
Pattern NameModiscoSignificance
metacluster_0/pattern_20.019373400000000002
Spib
Pattern NameModiscoSignificance
metacluster_0/pattern_20.00594861
metacluster_0/pattern_150.0111576
Elf3
Pattern NameModiscoSignificance
metacluster_0/pattern_20.0181743
Spdef
Pattern NameModiscoSignificance
metacluster_0/pattern_20.0125784
Spic
Pattern NameModiscoSignificance
metacluster_0/pattern_20.0479875
Irf8
Pattern NameModiscoSignificance
metacluster_0/pattern_20.0249399
metacluster_0/pattern_150.00035201599999999997
Irf4
Pattern NameModiscoSignificance
metacluster_0/pattern_20.0317376
metacluster_0/pattern_150.00198226
Nfib
Pattern NameModiscoSignificance
metacluster_0/pattern_35.36799e-05
Nfia
Pattern NameModiscoSignificance
metacluster_0/pattern_30.00819172
Nfic
Pattern NameModiscoSignificance
metacluster_0/pattern_30.00819172
Nrf1
Pattern NameModiscoSignificance
metacluster_0/pattern_42.2177900000000003e-10
Mef2d
Pattern NameModiscoSignificance
metacluster_0/pattern_51.24587e-09
Mef2a
Pattern NameModiscoSignificance
metacluster_0/pattern_56.00483e-05
Mef2c
Pattern NameModiscoSignificance
metacluster_0/pattern_57.15622e-08
Nfyb
Pattern NameModiscoSignificance
metacluster_0/pattern_61.69956e-14
Nfyc
Pattern NameModiscoSignificance
metacluster_0/pattern_61.2613099999999999e-09
Nfya
Pattern NameModiscoSignificance
metacluster_0/pattern_62.1847399999999996e-09
Foxi1
Pattern NameModiscoSignificance
metacluster_0/pattern_63.51389e-06
Pbx3
Pattern NameModiscoSignificance
metacluster_0/pattern_68.13747e-06
Creb1
Pattern NameModiscoSignificance
metacluster_0/pattern_70.00289543
metacluster_0/pattern_100.00755906
Atf7
Pattern NameModiscoSignificance
metacluster_0/pattern_70.0007794089999999999
metacluster_0/pattern_100.054139099999999996
Atf2
Pattern NameModiscoSignificance
metacluster_0/pattern_70.00132653
metacluster_0/pattern_100.0265695
Crem
Pattern NameModiscoSignificance
metacluster_0/pattern_70.0227776
metacluster_0/pattern_100.0398625
Jdp2
Pattern NameModiscoSignificance
metacluster_0/pattern_70.00148815
metacluster_0/pattern_100.00867574
metacluster_0/pattern_120.00047001199999999996
Creb5
Pattern NameModiscoSignificance
metacluster_0/pattern_70.00132653
Atf1
Pattern NameModiscoSignificance
metacluster_0/pattern_70.0227776
metacluster_0/pattern_80.015721000000000002
metacluster_0/pattern_100.0474946
Atf3
Pattern NameModiscoSignificance
metacluster_0/pattern_70.009475
metacluster_0/pattern_120.000149802
Fosl2
Pattern NameModiscoSignificance
metacluster_0/pattern_70.0227776
metacluster_0/pattern_120.00175057
Jun
Pattern NameModiscoSignificance
metacluster_0/pattern_70.039378300000000005
metacluster_0/pattern_100.013174200000000002
metacluster_0/pattern_120.037795800000000004
Tfe3
Pattern NameModiscoSignificance
metacluster_0/pattern_70.039378300000000005
metacluster_0/pattern_80.00135962
Usf1
Pattern NameModiscoSignificance
metacluster_0/pattern_80.00205443
Usf2
Pattern NameModiscoSignificance
metacluster_0/pattern_80.00234375
metacluster_0/pattern_90.013061700000000002
metacluster_0/pattern_170.033627300000000006
Tfeb
Pattern NameModiscoSignificance
metacluster_0/pattern_80.0009733710000000001
Tfec
Pattern NameModiscoSignificance
metacluster_0/pattern_80.00134353
Arntl
Pattern NameModiscoSignificance
metacluster_0/pattern_80.00605008
Mitf
Pattern NameModiscoSignificance
metacluster_0/pattern_80.000899261
Bhlhe40
Pattern NameModiscoSignificance
metacluster_0/pattern_80.00947149
Srebf1
Pattern NameModiscoSignificance
metacluster_0/pattern_80.00362056
Clock
Pattern NameModiscoSignificance
metacluster_0/pattern_80.056303399999999997
Mlx
Pattern NameModiscoSignificance
metacluster_0/pattern_80.0136685
Arnt
Pattern NameModiscoSignificance
metacluster_0/pattern_80.043181300000000006
Npas2
Pattern NameModiscoSignificance
metacluster_0/pattern_80.00135962
Creb3l2
Pattern NameModiscoSignificance
metacluster_0/pattern_80.0392998
Srebf2
Pattern NameModiscoSignificance
metacluster_0/pattern_80.00455275
Tcfl5
Pattern NameModiscoSignificance
metacluster_0/pattern_80.00532393
Bhlhe41
Pattern NameModiscoSignificance
metacluster_0/pattern_80.018349400000000002
Hes1
Pattern NameModiscoSignificance
metacluster_0/pattern_80.043083800000000005
Xbp1
Pattern NameModiscoSignificance
metacluster_0/pattern_80.043756699999999996
Mycn
Pattern NameModiscoSignificance
metacluster_0/pattern_80.056303399999999997
Mlxip
Pattern NameModiscoSignificance
metacluster_0/pattern_80.045438599999999996
Max
Pattern NameModiscoSignificance
metacluster_0/pattern_80.056303399999999997
Hlf
Pattern NameModiscoSignificance
metacluster_0/pattern_80.056303399999999997
metacluster_0/pattern_100.00191948
Arnt2
Pattern NameModiscoSignificance
metacluster_0/pattern_80.0574443
Dbp
Pattern NameModiscoSignificance
metacluster_0/pattern_80.0580173
metacluster_0/pattern_100.00180405
Taf1
Pattern NameModiscoSignificance
metacluster_0/pattern_91.53823e-05
Yy1
Pattern NameModiscoSignificance
metacluster_0/pattern_91.53823e-05
Rfx1
Pattern NameModiscoSignificance
metacluster_0/pattern_90.00054756
metacluster_0/pattern_133.14409e-09
Zfp42
Pattern NameModiscoSignificance
metacluster_0/pattern_90.012540899999999999
Maz
Pattern NameModiscoSignificance
metacluster_0/pattern_90.0156333
Mxi1
Pattern NameModiscoSignificance
metacluster_0/pattern_90.0166926
Klf15
Pattern NameModiscoSignificance
metacluster_0/pattern_90.059146000000000004
Cebpb
Pattern NameModiscoSignificance
metacluster_0/pattern_100.000592614
Cebpd
Pattern NameModiscoSignificance
metacluster_0/pattern_100.00038102199999999996
Cebpa
Pattern NameModiscoSignificance
metacluster_0/pattern_100.00106532
Cebpg
Pattern NameModiscoSignificance
metacluster_0/pattern_100.030303700000000003
Cebpe
Pattern NameModiscoSignificance
metacluster_0/pattern_100.00191948
Tef
Pattern NameModiscoSignificance
metacluster_0/pattern_100.00155638
Nfil3
Pattern NameModiscoSignificance
metacluster_0/pattern_100.00246421
Atf4
Pattern NameModiscoSignificance
metacluster_0/pattern_100.023212599999999996
Gmeb2
Pattern NameModiscoSignificance
metacluster_0/pattern_100.0118771
Ddit3
Pattern NameModiscoSignificance
metacluster_0/pattern_100.0248338
Jund
Pattern NameModiscoSignificance
metacluster_0/pattern_100.0480343
metacluster_0/pattern_120.00148893
Atoh1
Pattern NameModiscoSignificance
metacluster_0/pattern_110.0142942
Lyl1
Pattern NameModiscoSignificance
metacluster_0/pattern_110.0114209
Bhlha15
Pattern NameModiscoSignificance
metacluster_0/pattern_110.0583815
Ptf1a
Pattern NameModiscoSignificance
metacluster_0/pattern_110.0142942
Ascl1
Pattern NameModiscoSignificance
metacluster_0/pattern_110.0132296
Olig2
Pattern NameModiscoSignificance
metacluster_0/pattern_110.0142942
Figla
Pattern NameModiscoSignificance
metacluster_0/pattern_110.0142942
Tfap4
Pattern NameModiscoSignificance
metacluster_0/pattern_110.016851400000000002
Snai1
Pattern NameModiscoSignificance
metacluster_0/pattern_110.016851400000000002
Neurod1
Pattern NameModiscoSignificance
metacluster_0/pattern_110.0175846
Neurod2
Pattern NameModiscoSignificance
metacluster_0/pattern_110.0183927
Tcf3
Pattern NameModiscoSignificance
metacluster_0/pattern_110.0378076
Ascl2
Pattern NameModiscoSignificance
metacluster_0/pattern_110.032792400000000006
Myog
Pattern NameModiscoSignificance
metacluster_0/pattern_110.0229797
Twist1
Pattern NameModiscoSignificance
metacluster_0/pattern_110.0183927
Tcf12
Pattern NameModiscoSignificance
metacluster_0/pattern_110.0324286
Tcf7l1
Pattern NameModiscoSignificance
metacluster_0/pattern_110.0195195
Tal1
Pattern NameModiscoSignificance
metacluster_0/pattern_110.020577599999999998
metacluster_0/pattern_181.6909e-06
Tcf4
Pattern NameModiscoSignificance
metacluster_0/pattern_110.021912099999999997
Neurog2
Pattern NameModiscoSignificance
metacluster_0/pattern_110.021912099999999997
Tgif1
Pattern NameModiscoSignificance
metacluster_0/pattern_110.0249329
Myf5
Pattern NameModiscoSignificance
metacluster_0/pattern_110.025074700000000002
Myod1
Pattern NameModiscoSignificance
metacluster_0/pattern_110.0308975
Tcf21
Pattern NameModiscoSignificance
metacluster_0/pattern_110.027679900000000004
Msc
Pattern NameModiscoSignificance
metacluster_0/pattern_110.0262233
Myf6
Pattern NameModiscoSignificance
metacluster_0/pattern_110.0325204
Meis2
Pattern NameModiscoSignificance
metacluster_0/pattern_110.0479946
Bach2
Pattern NameModiscoSignificance
metacluster_0/pattern_121.7463499999999998e-06
Fos
Pattern NameModiscoSignificance
metacluster_0/pattern_121.65414e-05
Nfe2l2
Pattern NameModiscoSignificance
metacluster_0/pattern_120.000121095
Fosl1
Pattern NameModiscoSignificance
metacluster_0/pattern_120.013463999999999999
Nfe2
Pattern NameModiscoSignificance
metacluster_0/pattern_126.6394e-05
Fosb
Pattern NameModiscoSignificance
metacluster_0/pattern_127.26571e-05
Junb
Pattern NameModiscoSignificance
metacluster_0/pattern_120.013299700000000001
Bach1
Pattern NameModiscoSignificance
metacluster_0/pattern_120.000292373
Batf
Pattern NameModiscoSignificance
metacluster_0/pattern_120.013463999999999999
Mafa
Pattern NameModiscoSignificance
metacluster_0/pattern_120.0224528
Mafk
Pattern NameModiscoSignificance
metacluster_0/pattern_120.0411543
Mafb
Pattern NameModiscoSignificance
metacluster_0/pattern_120.0321666
Rfx3
Pattern NameModiscoSignificance
metacluster_0/pattern_130.000375141
Rfx2
Pattern NameModiscoSignificance
metacluster_0/pattern_130.00212716
Rfx4
Pattern NameModiscoSignificance
metacluster_0/pattern_131.3230899999999999e-05
Rfx7
Pattern NameModiscoSignificance
metacluster_0/pattern_130.000125428
Rfx6
Pattern NameModiscoSignificance
metacluster_0/pattern_130.000130102
Thap11
Pattern NameModiscoSignificance
metacluster_0/pattern_145.2288300000000006e-20
Zfp143
Pattern NameModiscoSignificance
metacluster_0/pattern_145.46739e-19
Tbx2
Pattern NameModiscoSignificance
metacluster_0/pattern_142.92393e-13
Irf1
Pattern NameModiscoSignificance
metacluster_0/pattern_153.46242e-06
Irf2
Pattern NameModiscoSignificance
metacluster_0/pattern_150.00468571
Irf7
Pattern NameModiscoSignificance
metacluster_0/pattern_150.00013277
Stat2
Pattern NameModiscoSignificance
metacluster_0/pattern_150.000676941
Irf9
Pattern NameModiscoSignificance
metacluster_0/pattern_150.00074828
Stat1
Pattern NameModiscoSignificance
metacluster_0/pattern_150.00158459
Prdm1
Pattern NameModiscoSignificance
metacluster_0/pattern_150.00163544
Irf5
Pattern NameModiscoSignificance
metacluster_0/pattern_150.0130764
Irf3
Pattern NameModiscoSignificance
metacluster_0/pattern_150.0239784
Irf6
Pattern NameModiscoSignificance
metacluster_0/pattern_150.0422796
Esrrg
Pattern NameModiscoSignificance
metacluster_0/pattern_160.000609707
Esrrb
Pattern NameModiscoSignificance
metacluster_0/pattern_160.022487599999999996
Nr5a2
Pattern NameModiscoSignificance
metacluster_0/pattern_160.015126599999999999
Nr4a2
Pattern NameModiscoSignificance
metacluster_0/pattern_160.0142391
Rarb
Pattern NameModiscoSignificance
metacluster_0/pattern_160.040730800000000005
Esrra
Pattern NameModiscoSignificance
metacluster_0/pattern_160.0198443
Nr1h3
Pattern NameModiscoSignificance
metacluster_0/pattern_160.015126599999999999
Nr2f1
Pattern NameModiscoSignificance
metacluster_0/pattern_160.015126599999999999
Rarg
Pattern NameModiscoSignificance
metacluster_0/pattern_160.050388199999999994
Nr2f2
Pattern NameModiscoSignificance
metacluster_0/pattern_160.0173108
Rara
Pattern NameModiscoSignificance
metacluster_0/pattern_160.0459927
Nr5a1
Pattern NameModiscoSignificance
metacluster_0/pattern_160.0198443
Rxrg
Pattern NameModiscoSignificance
metacluster_0/pattern_160.0198443
Rxra
Pattern NameModiscoSignificance
metacluster_0/pattern_160.0284946
Nr2f6
Pattern NameModiscoSignificance
metacluster_0/pattern_160.039612699999999994
Rxrb
Pattern NameModiscoSignificance
metacluster_0/pattern_160.027513299999999997
Pparg
Pattern NameModiscoSignificance
metacluster_0/pattern_160.0365389
Nr2c2
Pattern NameModiscoSignificance
metacluster_0/pattern_160.0369089
Ppara
Pattern NameModiscoSignificance
metacluster_0/pattern_160.0479565
Nr2c1
Pattern NameModiscoSignificance
metacluster_0/pattern_160.04919
Rora
Pattern NameModiscoSignificance
metacluster_0/pattern_160.059728300000000005
Zbtb33
Pattern NameModiscoSignificance
metacluster_0/pattern_170.00012439799999999998
Gata6
Pattern NameModiscoSignificance
metacluster_0/pattern_180.000175542
Gata1
Pattern NameModiscoSignificance
metacluster_0/pattern_185.95086e-06
Gata2
Pattern NameModiscoSignificance
metacluster_0/pattern_184.61057e-06
Gata4
Pattern NameModiscoSignificance
metacluster_0/pattern_180.00122724
Gata3
Pattern NameModiscoSignificance
metacluster_0/pattern_180.0526533
Gata5
Pattern NameModiscoSignificance
metacluster_0/pattern_180.00601254
In [6]:
display_paiwise_pattern_comparison(data_name, modisco_root, homer_root)
Number of CISBP TFs obtained by TF-MoDISco and Homer
Shared TFs between TF-MoDISco and Homer: #83
TF NameModiscoHomer
Fev
Pattern NameModiscoSignificance
metacluster_0/pattern_20.000302976
Pattern NameHomerSignificance
motif4.motif0.00411987
Usf1
Pattern NameModiscoSignificance
metacluster_0/pattern_80.00205443
Pattern NameHomerSignificance
motif8.motif0.0169478
Mitf
Pattern NameModiscoSignificance
metacluster_0/pattern_80.000899261
Pattern NameHomerSignificance
motif8.motif0.014880299999999999
Jdp2
Pattern NameModiscoSignificance
metacluster_0/pattern_70.00148815
metacluster_0/pattern_100.00867574
metacluster_0/pattern_120.00047001199999999996
Pattern NameHomerSignificance
motif8.motif0.0527024
Creb5
Pattern NameModiscoSignificance
metacluster_0/pattern_70.00132653
Pattern NameHomerSignificance
motif8.motif0.030303399999999998
Sp5
Pattern NameModiscoSignificance
metacluster_0/pattern_10.019021700000000002
Pattern NameHomerSignificance
motif2.motif0.04679880000000001
Ets1
Pattern NameModiscoSignificance
metacluster_0/pattern_20.000456839
Pattern NameHomerSignificance
motif4.motif0.0007994969999999999
Klf12
Pattern NameModiscoSignificance
metacluster_0/pattern_10.0210767
Pattern NameHomerSignificance
motif2.motif0.00284614
Sp2
Pattern NameModiscoSignificance
metacluster_0/pattern_11.56217e-06
metacluster_0/pattern_91.9181300000000002e-05
metacluster_0/pattern_170.0101473
Pattern NameHomerSignificance
motif2.motif0.000186233
Klf4
Pattern NameModiscoSignificance
metacluster_0/pattern_10.0182781
Pattern NameHomerSignificance
motif2.motif0.00301284
Thap11
Pattern NameModiscoSignificance
metacluster_0/pattern_145.2288300000000006e-20
Pattern NameHomerSignificance
motif7.motif1.0480399999999999e-05
Meis2
Pattern NameModiscoSignificance
metacluster_0/pattern_110.0479946
Pattern NameHomerSignificance
motif11.motif0.04500440000000001
Elk4
Pattern NameModiscoSignificance
metacluster_0/pattern_20.000456839
Pattern NameHomerSignificance
motif4.motif2.2126999999999997e-05
Bhlhe41
Pattern NameModiscoSignificance
metacluster_0/pattern_80.018349400000000002
Pattern NameHomerSignificance
motif8.motif0.0105743
Creb1
Pattern NameModiscoSignificance
metacluster_0/pattern_70.00289543
metacluster_0/pattern_100.00755906
Pattern NameHomerSignificance
motif8.motif0.0313968
Klf5
Pattern NameModiscoSignificance
metacluster_0/pattern_10.017159099999999997
Pattern NameHomerSignificance
motif2.motif0.00152437
Bhlhe40
Pattern NameModiscoSignificance
metacluster_0/pattern_80.00947149
Pattern NameHomerSignificance
motif8.motif0.0372649
Ctcfl
Pattern NameModiscoSignificance
metacluster_0/pattern_03.7547299999999997e-10
Pattern NameHomerSignificance
motif1.motif0.00024333799999999998
Tfeb
Pattern NameModiscoSignificance
metacluster_0/pattern_80.0009733710000000001
Pattern NameHomerSignificance
motif8.motif0.00456271
Srebf2
Pattern NameModiscoSignificance
metacluster_0/pattern_80.00455275
Pattern NameHomerSignificance
motif8.motif0.030303399999999998
Sp4
Pattern NameModiscoSignificance
metacluster_0/pattern_10.00247818
Pattern NameHomerSignificance
motif2.motif0.00738484
Erg
Pattern NameModiscoSignificance
metacluster_0/pattern_20.000456839
Pattern NameHomerSignificance
motif4.motif0.000388263
Arnt
Pattern NameModiscoSignificance
metacluster_0/pattern_80.043181300000000006
Pattern NameHomerSignificance
motif8.motif0.0419551
Elf4
Pattern NameModiscoSignificance
metacluster_0/pattern_20.00370317
Pattern NameHomerSignificance
motif4.motif0.000424048
Tgif1
Pattern NameModiscoSignificance
metacluster_0/pattern_110.0249329
Pattern NameHomerSignificance
motif11.motif0.00573459
Elf3
Pattern NameModiscoSignificance
metacluster_0/pattern_20.0181743
Pattern NameHomerSignificance
motif4.motif0.0038134999999999996
Clock
Pattern NameModiscoSignificance
metacluster_0/pattern_80.056303399999999997
Pattern NameHomerSignificance
motif8.motif0.00456271
Rxrb
Pattern NameModiscoSignificance
metacluster_0/pattern_160.027513299999999997
Pattern NameHomerSignificance
motif8.motif0.0424219
Zbtb17
Pattern NameModiscoSignificance
metacluster_0/pattern_10.00461247
metacluster_0/pattern_90.00313243
Pattern NameHomerSignificance
motif2.motif0.0060637
Egr1
Pattern NameModiscoSignificance
metacluster_0/pattern_10.00332781
metacluster_0/pattern_90.054882900000000005
Pattern NameHomerSignificance
motif2.motif0.015575299999999999
Max
Pattern NameModiscoSignificance
metacluster_0/pattern_80.056303399999999997
Pattern NameHomerSignificance
motif8.motif0.049873
Xbp1
Pattern NameModiscoSignificance
metacluster_0/pattern_80.043756699999999996
Pattern NameHomerSignificance
motif8.motif0.00603152
E2f1
Pattern NameModiscoSignificance
metacluster_0/pattern_10.00842386
Pattern NameHomerSignificance
motif2.motif0.00296309
Etv5
Pattern NameModiscoSignificance
metacluster_0/pattern_27.66451e-05
Pattern NameHomerSignificance
motif4.motif8.897959999999999e-05
Tfec
Pattern NameModiscoSignificance
metacluster_0/pattern_80.00134353
Pattern NameHomerSignificance
motif8.motif0.00818679
Nrf1
Pattern NameModiscoSignificance
metacluster_0/pattern_42.2177900000000003e-10
Pattern NameHomerSignificance
motif6.motif7.05019e-07
Klf6
Pattern NameModiscoSignificance
metacluster_0/pattern_10.000769122
Pattern NameHomerSignificance
motif2.motif0.000496483
Mlx
Pattern NameModiscoSignificance
metacluster_0/pattern_80.0136685
Pattern NameHomerSignificance
motif8.motif0.0169478
Klf7
Pattern NameModiscoSignificance
metacluster_0/pattern_10.000871055
Pattern NameHomerSignificance
motif2.motif9.40954e-06
Tbx2
Pattern NameModiscoSignificance
metacluster_0/pattern_142.92393e-13
Pattern NameHomerSignificance
motif7.motif0.000112321
Elk3
Pattern NameModiscoSignificance
metacluster_0/pattern_20.000456839
Pattern NameHomerSignificance
motif4.motif0.00188244
Sp3
Pattern NameModiscoSignificance
metacluster_0/pattern_13.58284e-06
metacluster_0/pattern_90.000449419
metacluster_0/pattern_170.0195249
Pattern NameHomerSignificance
motif2.motif0.000138557
Nfyb
Pattern NameModiscoSignificance
metacluster_0/pattern_61.69956e-14
Pattern NameHomerSignificance
motif5.motif0.0232965
Etv3
Pattern NameModiscoSignificance
metacluster_0/pattern_20.0005371369999999999
Pattern NameHomerSignificance
motif4.motif2.37778e-05
Etv1
Pattern NameModiscoSignificance
metacluster_0/pattern_20.000456839
Pattern NameHomerSignificance
motif4.motif7.02759e-05
Sp1
Pattern NameModiscoSignificance
metacluster_0/pattern_10.000871055
metacluster_0/pattern_97.32659e-05
Pattern NameHomerSignificance
motif2.motif0.00296309
Elf1
Pattern NameModiscoSignificance
metacluster_0/pattern_20.00102205
Pattern NameHomerSignificance
motif4.motif0.0008833389999999999
Atoh1
Pattern NameModiscoSignificance
metacluster_0/pattern_110.0142942
Pattern NameHomerSignificance
motif11.motif0.04500440000000001
Zfp143
Pattern NameModiscoSignificance
metacluster_0/pattern_145.46739e-19
Pattern NameHomerSignificance
motif7.motif3.19014e-05
Tfe3
Pattern NameModiscoSignificance
metacluster_0/pattern_70.039378300000000005
metacluster_0/pattern_80.00135962
Pattern NameHomerSignificance
motif8.motif0.00678112
Atf7
Pattern NameModiscoSignificance
metacluster_0/pattern_70.0007794089999999999
metacluster_0/pattern_100.054139099999999996
Pattern NameHomerSignificance
motif8.motif0.036976300000000004
Mef2d
Pattern NameModiscoSignificance
metacluster_0/pattern_51.24587e-09
Pattern NameHomerSignificance
motif3.motif4.03512e-08
Klf3
Pattern NameModiscoSignificance
metacluster_0/pattern_11.94024e-05
metacluster_0/pattern_90.046805
Pattern NameHomerSignificance
motif2.motif9.40954e-06
Ehf
Pattern NameModiscoSignificance
metacluster_0/pattern_20.00594861
Pattern NameHomerSignificance
motif4.motif9.28833e-05
XP_911724.4
Pattern NameModiscoSignificance
metacluster_0/pattern_20.000582974
Pattern NameHomerSignificance
motif4.motif2.37778e-05
Klf8
Pattern NameModiscoSignificance
metacluster_0/pattern_10.00175065
Pattern NameHomerSignificance
motif2.motif1.76346e-05
Srebf1
Pattern NameModiscoSignificance
metacluster_0/pattern_80.00362056
Pattern NameHomerSignificance
motif8.motif0.022278400000000004
Etv2
Pattern NameModiscoSignificance
metacluster_0/pattern_26.28624e-05
Pattern NameHomerSignificance
motif4.motif0.0013982999999999999
Fli1
Pattern NameModiscoSignificance
metacluster_0/pattern_20.000456839
Pattern NameHomerSignificance
motif4.motif0.000463188
Ctcf
Pattern NameModiscoSignificance
metacluster_0/pattern_01.1150999999999998e-09
Pattern NameHomerSignificance
motif1.motif9.60156e-06
Arntl
Pattern NameModiscoSignificance
metacluster_0/pattern_80.00605008
Pattern NameHomerSignificance
motif8.motif0.00603152
Etv6
Pattern NameModiscoSignificance
metacluster_0/pattern_20.000598565
Pattern NameHomerSignificance
motif4.motif0.0259625
Crem
Pattern NameModiscoSignificance
metacluster_0/pattern_70.0227776
metacluster_0/pattern_100.0398625
Pattern NameHomerSignificance
motif8.motif0.0313968
Yy1
Pattern NameModiscoSignificance
metacluster_0/pattern_91.53823e-05
Pattern NameHomerSignificance
motif14.motif0.047008999999999995
Nfyc
Pattern NameModiscoSignificance
metacluster_0/pattern_61.2613099999999999e-09
Pattern NameHomerSignificance
motif5.motif0.0232965
E2f4
Pattern NameModiscoSignificance
metacluster_0/pattern_10.000634214
Pattern NameHomerSignificance
motif2.motif0.000496483
Elf2
Pattern NameModiscoSignificance
metacluster_0/pattern_20.00599109
Pattern NameHomerSignificance
motif4.motif0.0115625
Mef2c
Pattern NameModiscoSignificance
metacluster_0/pattern_57.15622e-08
Pattern NameHomerSignificance
motif3.motif2.00613e-06
Nfya
Pattern NameModiscoSignificance
metacluster_0/pattern_62.1847399999999996e-09
Pattern NameHomerSignificance
motif5.motif0.0232965
Npas2
Pattern NameModiscoSignificance
metacluster_0/pattern_80.00135962
Pattern NameHomerSignificance
motif8.motif0.00603152
Tfap4
Pattern NameModiscoSignificance
metacluster_0/pattern_110.016851400000000002
Pattern NameHomerSignificance
motif11.motif0.04500440000000001
Elf5
Pattern NameModiscoSignificance
metacluster_0/pattern_20.019373400000000002
Pattern NameHomerSignificance
motif4.motif0.00284355
Klf1
Pattern NameModiscoSignificance
metacluster_0/pattern_10.0207053
Pattern NameHomerSignificance
motif2.motif0.017035400000000003
Etv4
Pattern NameModiscoSignificance
metacluster_0/pattern_20.000456839
Pattern NameHomerSignificance
motif4.motif0.012014700000000001
Gabpa
Pattern NameModiscoSignificance
metacluster_0/pattern_20.000456839
Pattern NameHomerSignificance
motif4.motif0.00584275
Spdef
Pattern NameModiscoSignificance
metacluster_0/pattern_20.0125784
Pattern NameHomerSignificance
motif4.motif0.00977515
Elk1
Pattern NameModiscoSignificance
metacluster_0/pattern_20.000456839
Pattern NameHomerSignificance
motif4.motif0.00131287
Creb3l2
Pattern NameModiscoSignificance
metacluster_0/pattern_80.0392998
Pattern NameHomerSignificance
motif8.motif0.0313968
Usf2
Pattern NameModiscoSignificance
metacluster_0/pattern_80.00234375
metacluster_0/pattern_90.013061700000000002
metacluster_0/pattern_170.033627300000000006
Pattern NameHomerSignificance
motif8.motif0.00603152
Egr2
Pattern NameModiscoSignificance
metacluster_0/pattern_10.0113352
metacluster_0/pattern_90.051937
Pattern NameHomerSignificance
motif2.motif0.015390299999999999
Klf15
Pattern NameModiscoSignificance
metacluster_0/pattern_90.059146000000000004
Pattern NameHomerSignificance
motif2.motif0.015575299999999999
Atf1
Pattern NameModiscoSignificance
metacluster_0/pattern_70.0227776
metacluster_0/pattern_80.015721000000000002
metacluster_0/pattern_100.0474946
Pattern NameHomerSignificance
motif8.motif0.034803100000000003
Mef2a
Pattern NameModiscoSignificance
metacluster_0/pattern_56.00483e-05
Pattern NameHomerSignificance
motif3.motif9.49607e-06
Unique TF-MoDISco TFs: #117
TF NameModiscoHomer
Tcf7l1
Pattern NameModiscoSignificance
metacluster_0/pattern_110.0195195
Absent
Fosb
Pattern NameModiscoSignificance
metacluster_0/pattern_127.26571e-05
Absent
Nr2c1
Pattern NameModiscoSignificance
metacluster_0/pattern_160.04919
Absent
Rfx1
Pattern NameModiscoSignificance
metacluster_0/pattern_90.00054756
metacluster_0/pattern_133.14409e-09
Absent
Gata3
Pattern NameModiscoSignificance
metacluster_0/pattern_180.0526533
Absent
Spi1
Pattern NameModiscoSignificance
metacluster_0/pattern_20.0377315
Absent
Nfia
Pattern NameModiscoSignificance
metacluster_0/pattern_30.00819172
Absent
Nfic
Pattern NameModiscoSignificance
metacluster_0/pattern_30.00819172
Absent
Hes1
Pattern NameModiscoSignificance
metacluster_0/pattern_80.043083800000000005
Absent
Tcf3
Pattern NameModiscoSignificance
metacluster_0/pattern_110.0378076
Absent
Msc
Pattern NameModiscoSignificance
metacluster_0/pattern_110.0262233
Absent
Neurod2
Pattern NameModiscoSignificance
metacluster_0/pattern_110.0183927
Absent
Pbx3
Pattern NameModiscoSignificance
metacluster_0/pattern_68.13747e-06
Absent
Rfx7
Pattern NameModiscoSignificance
metacluster_0/pattern_130.000125428
Absent
Maz
Pattern NameModiscoSignificance
metacluster_0/pattern_90.0156333
Absent
Snai1
Pattern NameModiscoSignificance
metacluster_0/pattern_110.016851400000000002
Absent
Myf6
Pattern NameModiscoSignificance
metacluster_0/pattern_110.0325204
Absent
Atf4
Pattern NameModiscoSignificance
metacluster_0/pattern_100.023212599999999996
Absent
Nr2f2
Pattern NameModiscoSignificance
metacluster_0/pattern_160.0173108
Absent
Foxi1
Pattern NameModiscoSignificance
metacluster_0/pattern_63.51389e-06
Absent
Neurog2
Pattern NameModiscoSignificance
metacluster_0/pattern_110.021912099999999997
Absent
Rarg
Pattern NameModiscoSignificance
metacluster_0/pattern_160.050388199999999994
Absent
Tcfl5
Pattern NameModiscoSignificance
metacluster_0/pattern_80.00532393
Absent
Nr2c2
Pattern NameModiscoSignificance
metacluster_0/pattern_160.0369089
Absent
Fosl2
Pattern NameModiscoSignificance
metacluster_0/pattern_70.0227776
metacluster_0/pattern_120.00175057
Absent
Rfx3
Pattern NameModiscoSignificance
metacluster_0/pattern_130.000375141
Absent
Nfe2
Pattern NameModiscoSignificance
metacluster_0/pattern_126.6394e-05
Absent
Pparg
Pattern NameModiscoSignificance
metacluster_0/pattern_160.0365389
Absent
Myod1
Pattern NameModiscoSignificance
metacluster_0/pattern_110.0308975
Absent
Zfp281
Pattern NameModiscoSignificance
metacluster_0/pattern_10.0267308
Absent
Ascl1
Pattern NameModiscoSignificance
metacluster_0/pattern_110.0132296
Absent
Rara
Pattern NameModiscoSignificance
metacluster_0/pattern_160.0459927
Absent
Ascl2
Pattern NameModiscoSignificance
metacluster_0/pattern_110.032792400000000006
Absent
Nr1h3
Pattern NameModiscoSignificance
metacluster_0/pattern_160.015126599999999999
Absent
Bhlha15
Pattern NameModiscoSignificance
metacluster_0/pattern_110.0583815
Absent
Cebpe
Pattern NameModiscoSignificance
metacluster_0/pattern_100.00191948
Absent
Bach1
Pattern NameModiscoSignificance
metacluster_0/pattern_120.000292373
Absent
Ppara
Pattern NameModiscoSignificance
metacluster_0/pattern_160.0479565
Absent
Mafk
Pattern NameModiscoSignificance
metacluster_0/pattern_120.0411543
Absent
Irf5
Pattern NameModiscoSignificance
metacluster_0/pattern_150.0130764
Absent
Esrrg
Pattern NameModiscoSignificance
metacluster_0/pattern_160.000609707
Absent
Gata4
Pattern NameModiscoSignificance
metacluster_0/pattern_180.00122724
Absent
Irf2
Pattern NameModiscoSignificance
metacluster_0/pattern_150.00468571
Absent
Stat1
Pattern NameModiscoSignificance
metacluster_0/pattern_150.00158459
Absent
Mafb
Pattern NameModiscoSignificance
metacluster_0/pattern_120.0321666
Absent
Nr5a2
Pattern NameModiscoSignificance
metacluster_0/pattern_160.015126599999999999
Absent
Atf2
Pattern NameModiscoSignificance
metacluster_0/pattern_70.00132653
metacluster_0/pattern_100.0265695
Absent
Mycn
Pattern NameModiscoSignificance
metacluster_0/pattern_80.056303399999999997
Absent
Rfx4
Pattern NameModiscoSignificance
metacluster_0/pattern_131.3230899999999999e-05
Absent
Nr5a1
Pattern NameModiscoSignificance
metacluster_0/pattern_160.0198443
Absent
Esrra
Pattern NameModiscoSignificance
metacluster_0/pattern_160.0198443
Absent
Spib
Pattern NameModiscoSignificance
metacluster_0/pattern_20.00594861
metacluster_0/pattern_150.0111576
Absent
Fosl1
Pattern NameModiscoSignificance
metacluster_0/pattern_120.013463999999999999
Absent
Arnt2
Pattern NameModiscoSignificance
metacluster_0/pattern_80.0574443
Absent
Dbp
Pattern NameModiscoSignificance
metacluster_0/pattern_80.0580173
metacluster_0/pattern_100.00180405
Absent
Rxrg
Pattern NameModiscoSignificance
metacluster_0/pattern_160.0198443
Absent
Mxi1
Pattern NameModiscoSignificance
metacluster_0/pattern_90.0166926
Absent
Esrrb
Pattern NameModiscoSignificance
metacluster_0/pattern_160.022487599999999996
Absent
Hlf
Pattern NameModiscoSignificance
metacluster_0/pattern_80.056303399999999997
metacluster_0/pattern_100.00191948
Absent
Gata5
Pattern NameModiscoSignificance
metacluster_0/pattern_180.00601254
Absent
Jun
Pattern NameModiscoSignificance
metacluster_0/pattern_70.039378300000000005
metacluster_0/pattern_100.013174200000000002
metacluster_0/pattern_120.037795800000000004
Absent
Tef
Pattern NameModiscoSignificance
metacluster_0/pattern_100.00155638
Absent
Irf7
Pattern NameModiscoSignificance
metacluster_0/pattern_150.00013277
Absent
Ddit3
Pattern NameModiscoSignificance
metacluster_0/pattern_100.0248338
Absent
Nfib
Pattern NameModiscoSignificance
metacluster_0/pattern_35.36799e-05
Absent
Gmeb2
Pattern NameModiscoSignificance
metacluster_0/pattern_100.0118771
Absent
Batf
Pattern NameModiscoSignificance
metacluster_0/pattern_120.013463999999999999
Absent
Rora
Pattern NameModiscoSignificance
metacluster_0/pattern_160.059728300000000005
Absent
Cebpa
Pattern NameModiscoSignificance
metacluster_0/pattern_100.00106532
Absent
Cebpg
Pattern NameModiscoSignificance
metacluster_0/pattern_100.030303700000000003
Absent
Irf8
Pattern NameModiscoSignificance
metacluster_0/pattern_20.0249399
metacluster_0/pattern_150.00035201599999999997
Absent
Tcf4
Pattern NameModiscoSignificance
metacluster_0/pattern_110.021912099999999997
Absent
Neurod1
Pattern NameModiscoSignificance
metacluster_0/pattern_110.0175846
Absent
Rfx2
Pattern NameModiscoSignificance
metacluster_0/pattern_130.00212716
Absent
Stat2
Pattern NameModiscoSignificance
metacluster_0/pattern_150.000676941
Absent
Irf4
Pattern NameModiscoSignificance
metacluster_0/pattern_20.0317376
metacluster_0/pattern_150.00198226
Absent
Ptf1a
Pattern NameModiscoSignificance
metacluster_0/pattern_110.0142942
Absent
Myog
Pattern NameModiscoSignificance
metacluster_0/pattern_110.0229797
Absent
Nr4a2
Pattern NameModiscoSignificance
metacluster_0/pattern_160.0142391
Absent
Zbtb33
Pattern NameModiscoSignificance
metacluster_0/pattern_170.00012439799999999998
Absent
Tal1
Pattern NameModiscoSignificance
metacluster_0/pattern_110.020577599999999998
metacluster_0/pattern_181.6909e-06
Absent
Figla
Pattern NameModiscoSignificance
metacluster_0/pattern_110.0142942
Absent
Nr2f1
Pattern NameModiscoSignificance
metacluster_0/pattern_160.015126599999999999
Absent
Nfe2l2
Pattern NameModiscoSignificance
metacluster_0/pattern_120.000121095
Absent
Cebpd
Pattern NameModiscoSignificance
metacluster_0/pattern_100.00038102199999999996
Absent
Twist1
Pattern NameModiscoSignificance
metacluster_0/pattern_110.0183927
Absent
Jund
Pattern NameModiscoSignificance
metacluster_0/pattern_100.0480343
metacluster_0/pattern_120.00148893
Absent
Zfx
Pattern NameModiscoSignificance
metacluster_0/pattern_10.0277712
metacluster_0/pattern_90.046805
metacluster_0/pattern_170.0101473
Absent
Irf1
Pattern NameModiscoSignificance
metacluster_0/pattern_153.46242e-06
Absent
Prdm1
Pattern NameModiscoSignificance
metacluster_0/pattern_150.00163544
Absent
Nfil3
Pattern NameModiscoSignificance
metacluster_0/pattern_100.00246421
Absent
Gata2
Pattern NameModiscoSignificance
metacluster_0/pattern_184.61057e-06
Absent
Mlxip
Pattern NameModiscoSignificance
metacluster_0/pattern_80.045438599999999996
Absent
Tcf12
Pattern NameModiscoSignificance
metacluster_0/pattern_110.0324286
Absent
Taf1
Pattern NameModiscoSignificance
metacluster_0/pattern_91.53823e-05
Absent
Irf9
Pattern NameModiscoSignificance
metacluster_0/pattern_150.00074828
Absent
Olig2
Pattern NameModiscoSignificance
metacluster_0/pattern_110.0142942
Absent
Junb
Pattern NameModiscoSignificance
metacluster_0/pattern_120.013299700000000001
Absent
Irf6
Pattern NameModiscoSignificance
metacluster_0/pattern_150.0422796
Absent
Gata6
Pattern NameModiscoSignificance
metacluster_0/pattern_180.000175542
Absent
Nr2f6
Pattern NameModiscoSignificance
metacluster_0/pattern_160.039612699999999994
Absent
Wt1
Pattern NameModiscoSignificance
metacluster_0/pattern_10.053816699999999995
metacluster_0/pattern_90.016170900000000002
Absent
Fos
Pattern NameModiscoSignificance
metacluster_0/pattern_121.65414e-05
Absent
Tcf21
Pattern NameModiscoSignificance
metacluster_0/pattern_110.027679900000000004
Absent
Spic
Pattern NameModiscoSignificance
metacluster_0/pattern_20.0479875
Absent
Gata1
Pattern NameModiscoSignificance
metacluster_0/pattern_185.95086e-06
Absent
Rarb
Pattern NameModiscoSignificance
metacluster_0/pattern_160.040730800000000005
Absent
Zfp42
Pattern NameModiscoSignificance
metacluster_0/pattern_90.012540899999999999
Absent
Irf3
Pattern NameModiscoSignificance
metacluster_0/pattern_150.0239784
Absent
Mafa
Pattern NameModiscoSignificance
metacluster_0/pattern_120.0224528
Absent
Rxra
Pattern NameModiscoSignificance
metacluster_0/pattern_160.0284946
Absent
Myf5
Pattern NameModiscoSignificance
metacluster_0/pattern_110.025074700000000002
Absent
Atf3
Pattern NameModiscoSignificance
metacluster_0/pattern_70.009475
metacluster_0/pattern_120.000149802
Absent
Cebpb
Pattern NameModiscoSignificance
metacluster_0/pattern_100.000592614
Absent
Lyl1
Pattern NameModiscoSignificance
metacluster_0/pattern_110.0114209
Absent
Rfx6
Pattern NameModiscoSignificance
metacluster_0/pattern_130.000130102
Absent
Bach2
Pattern NameModiscoSignificance
metacluster_0/pattern_121.7463499999999998e-06
Absent
Unique Homer TFs: #7
TF NameModiscoHomer
Meis3Absent
Pattern NameHomerSignificance
motif11.motif0.0380921
Hey2Absent
Pattern NameHomerSignificance
motif8.motif0.034041800000000004
MycAbsent
Pattern NameHomerSignificance
motif8.motif0.05950930000000001
E2f6Absent
Pattern NameHomerSignificance
motif2.motif0.015575299999999999
E2f7Absent
Pattern NameHomerSignificance
motif2.motif0.015575299999999999
Zbtb1Absent
Pattern NameHomerSignificance
motif2.motif0.00738484
Pknox2Absent
Pattern NameHomerSignificance
motif11.motif0.0380921