# Parameters
data_name = "CH12;med14;A;CL"
modisco_root = "/srv/scratch/msharmin/mouse_hem/with_tfd/full_mouse50/Naive_modisco2019"
tomtom_report_root = "http://mitra.stanford.edu/kundaje/msharmin/report/tomtom_outs/cells"
task_dir = "task_92-naivegw"
perf_file = "/srv/scratch/msharmin/mouse_hem/with_tfd/full_mouse50/fineFactorized/task_92-naivegw/NaiveauPRC.txt"
homer_root = "/srv/scratch/msharmin/mouse_hem/with_tfd/full_mouse50/Naive_scans"
reportfile = "/mnt/lab_data/kundaje/msharmin/annotations/filtering samples_MS2.xlsx"
sheetname = "filter23"

from matlas.reports import display_metadata

load data from labcluster

Using TensorFlow backend.
2019-08-30 19:01:00,233 [WARNING] git-lfs not installed

display_metadata(data_name, perf_file, reportfile, sheetname)

Sample Information

MetaData Name	Description
Cell type	ch12 med14 mt
Cell Group	Cancer or Immortalized cells
Experiment Name	ATAC
Experiment Group	Casellas Lab

Pipeline Output

replicate	Naïve overlap peaks	IDR peaks	TSS enrichment (< 8 is very poor <10 is low)	Final number of unique mapping, dup-filtered, chrM filtered reads	Number of reads in called peak regions	Fraction of reads in called peak regions	Number of reads in promoter regions	Fraction of reads in promoter regions	Number of reads in enhancer regions	Fraction of reads in enhancer regions
rep1	110526	85159	6.3964	195773338	NA	NA	NA	NA	NA	NA

Modelling Metadata

Metric	Value
auPRC	0.6213
Calibrated Recall at 50% FDR	0.217
Number of Positive Examples in Test Data	39445
Number of Negative Examples in Test Data	8031406
Imbalance Ratio in Test Data	0.0049
Test Chromosomes	chr2, chr3, chr19

from matlas.reports import display_paiwise_pattern_comparison
from matlas.reports import display_denovo_patterns

display_denovo_patterns(data_name, modisco_root=modisco_root)

TF-MoDISco is using the TensorFlow backend.

The following two links show list of Denovo Patterns and corresponding Motifs discovered by TF-MoDISco

Click here for Denovo Patterns by TF-MoDISco: #18

Pattern Name	TF Name(s)	Modisco
metacluster_1/pattern_0 # seqlets: 5854 SequenceContrib ScoresHyp_Contrib Scores	Spib, Spi1, Irf8, Irf4, Etv6, Ets1, Erg, Gabpa, Spic, Elk1, Etv2, Ehf, Etv3, Elf4, Elf1, Fli1, Elf3, Elf2, Etv4, XP_911724.4, Elk4, Elk3, Etv1, Etv5, Prdm1, Irf3, Elf5, Irf2, Irf1, Spdef, Fev
metacluster_1/pattern_1 # seqlets: 3461 SequenceContrib ScoresHyp_Contrib Scores	Sp2, Sp3, Klf3, Sp1, Sp4, Egr1, Klf4, Zbtb17, Klf5, E2f4, Sp5, Klf7, Zfp281, Klf6, Klf8, Wt1, Klf12, Maz, Egr2, Klf1, E2f1, Klf15, Ctcfl, Srebf2, Zfp740
metacluster_1/pattern_2 # seqlets: 2621 SequenceContrib ScoresHyp_Contrib Scores	Ctcf
metacluster_1/pattern_3 # seqlets: 1644 SequenceContrib ScoresHyp_Contrib Scores	Nrf1
metacluster_1/pattern_4 # seqlets: 1562 SequenceContrib ScoresHyp_Contrib Scores	Nfyb, Nfyc, Nfya, Foxi1, Pbx3
metacluster_1/pattern_5 # seqlets: 1292 SequenceContrib ScoresHyp_Contrib Scores	Nfkb2, Rela, Nfkb1, Relb, Rel
metacluster_1/pattern_6 # seqlets: 1099 SequenceContrib ScoresHyp_Contrib Scores	Irf7, Stat2, Stat1, Irf9, Batf3, Irf5
metacluster_1/pattern_7 # seqlets: 982 SequenceContrib ScoresHyp_Contrib Scores	Ebf1, Prdm16
metacluster_1/pattern_8 # seqlets: 958 SequenceContrib ScoresHyp_Contrib Scores	Taf1, Yy1, Zfx, Zfp42, Rfx1
metacluster_1/pattern_9 # seqlets: 914 SequenceContrib ScoresHyp_Contrib Scores	Zfp143, Thap11, Tbx2
metacluster_1/pattern_10 # seqlets: 772 SequenceContrib ScoresHyp_Contrib Scores	Creb1, Atf2, Atf7, Usf2, Atf1, Crem, Jdp2, Creb5, Atf3, Fosl2, Jun, Fosl1, Rxrb, Nfil3, Creb3l2, Tfec
metacluster_1/pattern_11 # seqlets: 684 SequenceContrib ScoresHyp_Contrib Scores	Pou2f2
metacluster_1/pattern_12 # seqlets: 619 SequenceContrib ScoresHyp_Contrib Scores	Usf1, Tfeb, Arntl, Mitf, Srebf1, Tfe3, Bhlhe40, Clock, Mlx, Arnt, Npas2, Tcfl5, Bhlhe41, Xbp1, Hlf, Dbp, Hes1
metacluster_1/pattern_13 # seqlets: 520 SequenceContrib ScoresHyp_Contrib Scores	E2f7, Bcl6, Sall4
metacluster_1/pattern_14 # seqlets: 437 SequenceContrib ScoresHyp_Contrib Scores	Batf, Fosb, Jund, Junb, Fos, Bach2, Nfe2, Nfe2l2, Bach1, Mafk, Mafb, Mafa, Mafg, Maff, Maf
metacluster_1/pattern_15 # seqlets: 363 SequenceContrib ScoresHyp_Contrib Scores	Mef2a, Mef2d, Mef2c
metacluster_1/pattern_16 # seqlets: 291 SequenceContrib ScoresHyp_Contrib Scores	Rfx2, Rfx3, Rfx4, Rfx7, Rfx6
metacluster_1/pattern_17 # seqlets: 242 SequenceContrib ScoresHyp_Contrib Scores	Zbtb33

Click here for Motifs by TF-MoDISco: #145

TF Name	Pattern(s)
Spib	Pattern Name Modisco Significance metacluster_1/pattern_0 1.4985499999999998e-06 metacluster_1/pattern_6 7.47772e-05
Spi1	Pattern Name Modisco Significance metacluster_1/pattern_0 0.00028184 metacluster_1/pattern_6 0.0335766
Irf8	Pattern Name Modisco Significance metacluster_1/pattern_0 3.35677e-05 metacluster_1/pattern_6 1.73275e-07
Irf4	Pattern Name Modisco Significance metacluster_1/pattern_0 3.92321e-05 metacluster_1/pattern_6 0.00280829
Etv6	Pattern Name Modisco Significance metacluster_1/pattern_0 0.00208283
Ets1	Pattern Name Modisco Significance metacluster_1/pattern_0 0.00029281099999999997
Erg	Pattern Name Modisco Significance metacluster_1/pattern_0 0.000385311
Gabpa	Pattern Name Modisco Significance metacluster_1/pattern_0 0.00379386
Spic	Pattern Name Modisco Significance metacluster_1/pattern_0 0.00028184
Elk1	Pattern Name Modisco Significance metacluster_1/pattern_0 0.00034481199999999995
Etv2	Pattern Name Modisco Significance metacluster_1/pattern_0 0.00029281099999999997
Ehf	Pattern Name Modisco Significance metacluster_1/pattern_0 0.00208283
Etv3	Pattern Name Modisco Significance metacluster_1/pattern_0 0.00034481199999999995
Elf4	Pattern Name Modisco Significance metacluster_1/pattern_0 0.00034481199999999995
Elf1	Pattern Name Modisco Significance metacluster_1/pattern_0 0.00036162
Fli1	Pattern Name Modisco Significance metacluster_1/pattern_0 0.00244253
Elf3	Pattern Name Modisco Significance metacluster_1/pattern_0 0.00458455
Elf2	Pattern Name Modisco Significance metacluster_1/pattern_0 0.00726463
Etv4	Pattern Name Modisco Significance metacluster_1/pattern_0 0.00138253
XP_911724.4	Pattern Name Modisco Significance metacluster_1/pattern_0 0.000448308
Elk4	Pattern Name Modisco Significance metacluster_1/pattern_0 0.00124349
Elk3	Pattern Name Modisco Significance metacluster_1/pattern_0 0.00109085
Etv1	Pattern Name Modisco Significance metacluster_1/pattern_0 0.00145227
Etv5	Pattern Name Modisco Significance metacluster_1/pattern_0 0.00124349
Prdm1	Pattern Name Modisco Significance metacluster_1/pattern_0 0.00140989 metacluster_1/pattern_6 0.00341795
Irf3	Pattern Name Modisco Significance metacluster_1/pattern_0 0.00145418 metacluster_1/pattern_6 0.024406900000000002
Elf5	Pattern Name Modisco Significance metacluster_1/pattern_0 0.00742475
Irf2	Pattern Name Modisco Significance metacluster_1/pattern_0 0.00234303 metacluster_1/pattern_6 0.00373727
Irf1	Pattern Name Modisco Significance metacluster_1/pattern_0 0.00371213 metacluster_1/pattern_6 1.73275e-07
Spdef	Pattern Name Modisco Significance metacluster_1/pattern_0 0.0108871
Fev	Pattern Name Modisco Significance metacluster_1/pattern_0 0.0127447
Sp2	Pattern Name Modisco Significance metacluster_1/pattern_1 5.623200000000001e-10 metacluster_1/pattern_8 5.76845e-05 metacluster_1/pattern_13 8.19429e-06
Sp3	Pattern Name Modisco Significance metacluster_1/pattern_1 6.47795e-09 metacluster_1/pattern_8 0.000239061 metacluster_1/pattern_13 3.932380000000001e-06
Klf3	Pattern Name Modisco Significance metacluster_1/pattern_1 9.41831e-08 metacluster_1/pattern_8 0.0265361 metacluster_1/pattern_13 0.000395091
Sp1	Pattern Name Modisco Significance metacluster_1/pattern_1 0.000302787 metacluster_1/pattern_8 7.01542e-05 metacluster_1/pattern_13 0.022856900000000003
Sp4	Pattern Name Modisco Significance metacluster_1/pattern_1 0.00126197 metacluster_1/pattern_13 0.0423524
Egr1	Pattern Name Modisco Significance metacluster_1/pattern_1 0.0249565 metacluster_1/pattern_13 0.00107983
Klf4	Pattern Name Modisco Significance metacluster_1/pattern_1 0.000848547 metacluster_1/pattern_13 0.00212346
Zbtb17	Pattern Name Modisco Significance metacluster_1/pattern_1 0.000204677 metacluster_1/pattern_8 0.00934548 metacluster_1/pattern_13 1.19875e-08
Klf5	Pattern Name Modisco Significance metacluster_1/pattern_1 0.000302787 metacluster_1/pattern_13 0.00166615
E2f4	Pattern Name Modisco Significance metacluster_1/pattern_1 0.00038088699999999995
Sp5	Pattern Name Modisco Significance metacluster_1/pattern_1 0.000531396 metacluster_1/pattern_13 4.08027e-05
Klf7	Pattern Name Modisco Significance metacluster_1/pattern_1 0.000634531
Zfp281	Pattern Name Modisco Significance metacluster_1/pattern_1 0.00156682 metacluster_1/pattern_13 0.0041741999999999994
Klf6	Pattern Name Modisco Significance metacluster_1/pattern_1 0.00097015 metacluster_1/pattern_13 0.0041741999999999994
Klf8	Pattern Name Modisco Significance metacluster_1/pattern_1 0.00106011
Wt1	Pattern Name Modisco Significance metacluster_1/pattern_1 0.00106011 metacluster_1/pattern_8 0.0265361 metacluster_1/pattern_13 4.08027e-05
Klf12	Pattern Name Modisco Significance metacluster_1/pattern_1 0.00118458
Maz	Pattern Name Modisco Significance metacluster_1/pattern_1 0.00424401 metacluster_1/pattern_8 0.0265361 metacluster_1/pattern_13 1.20553e-06
Egr2	Pattern Name Modisco Significance metacluster_1/pattern_1 0.00444277 metacluster_1/pattern_8 0.0467184 metacluster_1/pattern_13 0.0083182
Klf1	Pattern Name Modisco Significance metacluster_1/pattern_1 0.021090900000000003 metacluster_1/pattern_13 0.0165505
E2f1	Pattern Name Modisco Significance metacluster_1/pattern_1 0.021090900000000003 metacluster_1/pattern_13 0.027978899999999998
Klf15	Pattern Name Modisco Significance metacluster_1/pattern_1 0.021090900000000003 metacluster_1/pattern_13 1.3319e-05
Ctcfl	Pattern Name Modisco Significance metacluster_1/pattern_1 0.0316603 metacluster_1/pattern_2 2.77872e-08
Srebf2	Pattern Name Modisco Significance metacluster_1/pattern_1 0.047717 metacluster_1/pattern_12 0.0041278999999999995
Zfp740	Pattern Name Modisco Significance metacluster_1/pattern_1 0.0571711 metacluster_1/pattern_13 0.0148643
Ctcf	Pattern Name Modisco Significance metacluster_1/pattern_2 3.48984e-11
Nrf1	Pattern Name Modisco Significance metacluster_1/pattern_3 1.64221e-07
Nfyb	Pattern Name Modisco Significance metacluster_1/pattern_4 6.66253e-12
Nfyc	Pattern Name Modisco Significance metacluster_1/pattern_4 3.80609e-11
Nfya	Pattern Name Modisco Significance metacluster_1/pattern_4 5.45035e-11
Foxi1	Pattern Name Modisco Significance metacluster_1/pattern_4 6.48484e-07
Pbx3	Pattern Name Modisco Significance metacluster_1/pattern_4 3.66486e-06
Nfkb2	Pattern Name Modisco Significance metacluster_1/pattern_5 5.670940000000001e-10
Rela	Pattern Name Modisco Significance metacluster_1/pattern_5 0.00014414200000000002 metacluster_1/pattern_13 0.0009903730000000001
Nfkb1	Pattern Name Modisco Significance metacluster_1/pattern_5 2.9686000000000003e-06
Relb	Pattern Name Modisco Significance metacluster_1/pattern_5 3.31886e-06
Rel	Pattern Name Modisco Significance metacluster_1/pattern_5 0.0221775
Irf7	Pattern Name Modisco Significance metacluster_1/pattern_6 0.000863635
Stat2	Pattern Name Modisco Significance metacluster_1/pattern_6 0.00170804
Stat1	Pattern Name Modisco Significance metacluster_1/pattern_6 0.00231603
Irf9	Pattern Name Modisco Significance metacluster_1/pattern_6 0.00280829
Batf3	Pattern Name Modisco Significance metacluster_1/pattern_6 0.00899793
Irf5	Pattern Name Modisco Significance metacluster_1/pattern_6 0.0159832
Ebf1	Pattern Name Modisco Significance metacluster_1/pattern_7 0.000232146
Prdm16	Pattern Name Modisco Significance metacluster_1/pattern_7 0.00638628
Taf1	Pattern Name Modisco Significance metacluster_1/pattern_8 4.070159999999999e-06
Yy1	Pattern Name Modisco Significance metacluster_1/pattern_8 5.816180000000001e-06
Zfx	Pattern Name Modisco Significance metacluster_1/pattern_8 0.0023710999999999997 metacluster_1/pattern_10 0.0345825
Zfp42	Pattern Name Modisco Significance metacluster_1/pattern_8 0.010779500000000001
Rfx1	Pattern Name Modisco Significance metacluster_1/pattern_8 0.0265361 metacluster_1/pattern_16 1.37582e-10
Zfp143	Pattern Name Modisco Significance metacluster_1/pattern_9 2.8601999999999994e-23
Thap11	Pattern Name Modisco Significance metacluster_1/pattern_9 6.69944e-23
Tbx2	Pattern Name Modisco Significance metacluster_1/pattern_9 7.31107e-13
Creb1	Pattern Name Modisco Significance metacluster_1/pattern_10 0.00290802
Atf2	Pattern Name Modisco Significance metacluster_1/pattern_10 0.000974535
Atf7	Pattern Name Modisco Significance metacluster_1/pattern_10 0.000406855
Usf2	Pattern Name Modisco Significance metacluster_1/pattern_10 0.000154001 metacluster_1/pattern_12 0.00304618
Atf1	Pattern Name Modisco Significance metacluster_1/pattern_10 0.0217115 metacluster_1/pattern_12 0.0138435
Crem	Pattern Name Modisco Significance metacluster_1/pattern_10 0.0151733
Jdp2	Pattern Name Modisco Significance metacluster_1/pattern_10 0.000753187 metacluster_1/pattern_14 1.1256500000000001e-05
Creb5	Pattern Name Modisco Significance metacluster_1/pattern_10 0.000974535
Atf3	Pattern Name Modisco Significance metacluster_1/pattern_10 0.00499469 metacluster_1/pattern_14 0.000539446
Fosl2	Pattern Name Modisco Significance metacluster_1/pattern_10 0.016981200000000002 metacluster_1/pattern_14 0.00123035
Jun	Pattern Name Modisco Significance metacluster_1/pattern_10 0.0345825 metacluster_1/pattern_14 0.0253057
Fosl1	Pattern Name Modisco Significance metacluster_1/pattern_10 0.035245099999999994 metacluster_1/pattern_14 0.037288199999999994
Rxrb	Pattern Name Modisco Significance metacluster_1/pattern_10 0.038458400000000004
Nfil3	Pattern Name Modisco Significance metacluster_1/pattern_10 0.0547845
Creb3l2	Pattern Name Modisco Significance metacluster_1/pattern_10 0.0547845 metacluster_1/pattern_12 0.0509119
Tfec	Pattern Name Modisco Significance metacluster_1/pattern_10 0.056323000000000005 metacluster_1/pattern_12 0.00244741
Pou2f2	Pattern Name Modisco Significance metacluster_1/pattern_11 0.00729603
Usf1	Pattern Name Modisco Significance metacluster_1/pattern_12 0.00344463
Tfeb	Pattern Name Modisco Significance metacluster_1/pattern_12 0.00116314
Arntl	Pattern Name Modisco Significance metacluster_1/pattern_12 0.00496533
Mitf	Pattern Name Modisco Significance metacluster_1/pattern_12 0.00146836
Srebf1	Pattern Name Modisco Significance metacluster_1/pattern_12 0.00304618
Tfe3	Pattern Name Modisco Significance metacluster_1/pattern_12 0.00263423
Bhlhe40	Pattern Name Modisco Significance metacluster_1/pattern_12 0.00998351
Clock	Pattern Name Modisco Significance metacluster_1/pattern_12 0.024339
Mlx	Pattern Name Modisco Significance metacluster_1/pattern_12 0.0236083
Arnt	Pattern Name Modisco Significance metacluster_1/pattern_12 0.0399651
Npas2	Pattern Name Modisco Significance metacluster_1/pattern_12 0.00177726
Tcfl5	Pattern Name Modisco Significance metacluster_1/pattern_12 0.00571925
Bhlhe41	Pattern Name Modisco Significance metacluster_1/pattern_12 0.0160093
Xbp1	Pattern Name Modisco Significance metacluster_1/pattern_12 0.0399651
Hlf	Pattern Name Modisco Significance metacluster_1/pattern_12 0.05158719999999999
Dbp	Pattern Name Modisco Significance metacluster_1/pattern_12 0.0557159
Hes1	Pattern Name Modisco Significance metacluster_1/pattern_12 0.0570861
E2f7	Pattern Name Modisco Significance metacluster_1/pattern_13 0.0320335
Bcl6	Pattern Name Modisco Significance metacluster_1/pattern_13 0.0320335
Sall4	Pattern Name Modisco Significance metacluster_1/pattern_13 0.0560816
Batf	Pattern Name Modisco Significance metacluster_1/pattern_14 0.00386062
Fosb	Pattern Name Modisco Significance metacluster_1/pattern_14 0.00037167099999999996
Jund	Pattern Name Modisco Significance metacluster_1/pattern_14 0.00306481
Junb	Pattern Name Modisco Significance metacluster_1/pattern_14 0.0130168
Fos	Pattern Name Modisco Significance metacluster_1/pattern_14 0.000771658
Bach2	Pattern Name Modisco Significance metacluster_1/pattern_14 0.00412634
Nfe2	Pattern Name Modisco Significance metacluster_1/pattern_14 0.00561876
Nfe2l2	Pattern Name Modisco Significance metacluster_1/pattern_14 0.00746671
Bach1	Pattern Name Modisco Significance metacluster_1/pattern_14 0.00724497
Mafk	Pattern Name Modisco Significance metacluster_1/pattern_14 0.019876400000000002
Mafb	Pattern Name Modisco Significance metacluster_1/pattern_14 0.0318571
Mafa	Pattern Name Modisco Significance metacluster_1/pattern_14 0.0256219
Mafg	Pattern Name Modisco Significance metacluster_1/pattern_14 0.037025999999999996
Maff	Pattern Name Modisco Significance metacluster_1/pattern_14 0.047649199999999996
Maf	Pattern Name Modisco Significance metacluster_1/pattern_14 0.0575552
Mef2a	Pattern Name Modisco Significance metacluster_1/pattern_15 0.000118275
Mef2d	Pattern Name Modisco Significance metacluster_1/pattern_15 7.254069999999999e-10
Mef2c	Pattern Name Modisco Significance metacluster_1/pattern_15 7.381770000000001e-09
Rfx2	Pattern Name Modisco Significance metacluster_1/pattern_16 7.00563e-09
Rfx3	Pattern Name Modisco Significance metacluster_1/pattern_16 0.00160181
Rfx4	Pattern Name Modisco Significance metacluster_1/pattern_16 7.75422e-05
Rfx7	Pattern Name Modisco Significance metacluster_1/pattern_16 0.00067774
Rfx6	Pattern Name Modisco Significance metacluster_1/pattern_16 0.00160348
Zbtb33	Pattern Name Modisco Significance metacluster_1/pattern_17 2.13096e-05

display_paiwise_pattern_comparison(data_name, modisco_root, homer_root)

Number of CISBP TFs obtained by TF-MoDISco and Homer

Shared TFs between TF-MoDISco and Homer: #81

TF Name	Modisco	Homer
Nfkb1	Pattern Name Modisco Significance metacluster_1/pattern_5 2.9686000000000003e-06	Pattern Name Homer Significance motif10.motif 0.00234323
Elk1	Pattern Name Modisco Significance metacluster_1/pattern_0 0.00034481199999999995	Pattern Name Homer Significance motif1.motif 0.000672095
Arntl	Pattern Name Modisco Significance metacluster_1/pattern_12 0.00496533	Pattern Name Homer Significance motif5.motif 0.0341287
Zfp42	Pattern Name Modisco Significance metacluster_1/pattern_8 0.010779500000000001	Pattern Name Homer Significance motif11.motif 0.00858732
Rela	Pattern Name Modisco Significance metacluster_1/pattern_5 0.00014414200000000002 metacluster_1/pattern_13 0.0009903730000000001	Pattern Name Homer Significance motif10.motif 0.00567904
Ctcfl	Pattern Name Modisco Significance metacluster_1/pattern_1 0.0316603 metacluster_1/pattern_2 2.77872e-08	Pattern Name Homer Significance motif8.motif 0.000615096
Spic	Pattern Name Modisco Significance metacluster_1/pattern_0 0.00028184	Pattern Name Homer Significance motif1.motif 0.00565604
Tfeb	Pattern Name Modisco Significance metacluster_1/pattern_12 0.00116314	Pattern Name Homer Significance motif5.motif 0.0111797
Ets1	Pattern Name Modisco Significance metacluster_1/pattern_0 0.00029281099999999997	Pattern Name Homer Significance motif1.motif 0.00106914
Elf5	Pattern Name Modisco Significance metacluster_1/pattern_0 0.00742475	Pattern Name Homer Significance motif1.motif 0.00119089
Klf6	Pattern Name Modisco Significance metacluster_1/pattern_1 0.00097015 metacluster_1/pattern_13 0.0041741999999999994	Pattern Name Homer Significance motif2.motif 0.00234315
Rel	Pattern Name Modisco Significance metacluster_1/pattern_5 0.0221775	Pattern Name Homer Significance motif10.motif 0.013957299999999997
Clock	Pattern Name Modisco Significance metacluster_1/pattern_12 0.024339	Pattern Name Homer Significance motif5.motif 0.0182055
Klf7	Pattern Name Modisco Significance metacluster_1/pattern_1 0.000634531	Pattern Name Homer Significance motif2.motif 0.000696145
Tbx2	Pattern Name Modisco Significance metacluster_1/pattern_9 7.31107e-13	Pattern Name Homer Significance motif4.motif 4.78052e-06
Irf5	Pattern Name Modisco Significance metacluster_1/pattern_6 0.0159832	Pattern Name Homer Significance motif1.motif 0.0464997
Klf3	Pattern Name Modisco Significance metacluster_1/pattern_1 9.41831e-08 metacluster_1/pattern_8 0.0265361 metacluster_1/pattern_13 0.000395091	Pattern Name Homer Significance motif2.motif 0.000696145
Elf1	Pattern Name Modisco Significance metacluster_1/pattern_0 0.00036162	Pattern Name Homer Significance motif1.motif 0.00038041
Etv6	Pattern Name Modisco Significance metacluster_1/pattern_0 0.00208283	Pattern Name Homer Significance motif1.motif 0.0116241
Foxi1	Pattern Name Modisco Significance metacluster_1/pattern_4 6.48484e-07	Pattern Name Homer Significance motif3.motif 1.22075e-05
Xbp1	Pattern Name Modisco Significance metacluster_1/pattern_12 0.0399651	Pattern Name Homer Significance motif5.motif 0.0207828
Usf2	Pattern Name Modisco Significance metacluster_1/pattern_10 0.000154001 metacluster_1/pattern_12 0.00304618	Pattern Name Homer Significance motif5.motif 0.0182055
Nfyc	Pattern Name Modisco Significance metacluster_1/pattern_4 3.80609e-11	Pattern Name Homer Significance motif3.motif 7.403069999999999e-07
Fev	Pattern Name Modisco Significance metacluster_1/pattern_0 0.0127447	Pattern Name Homer Significance motif1.motif 0.0100941
Spi1	Pattern Name Modisco Significance metacluster_1/pattern_0 0.00028184 metacluster_1/pattern_6 0.0335766	Pattern Name Homer Significance motif1.motif 0.027923000000000003
Egr1	Pattern Name Modisco Significance metacluster_1/pattern_1 0.0249565 metacluster_1/pattern_13 0.00107983	Pattern Name Homer Significance motif2.motif 0.028457099999999996
Pbx3	Pattern Name Modisco Significance metacluster_1/pattern_4 3.66486e-06	Pattern Name Homer Significance motif3.motif 4.20679e-05
Mitf	Pattern Name Modisco Significance metacluster_1/pattern_12 0.00146836	Pattern Name Homer Significance motif5.motif 0.050264300000000005
Atf3	Pattern Name Modisco Significance metacluster_1/pattern_10 0.00499469 metacluster_1/pattern_14 0.000539446	Pattern Name Homer Significance motif5.motif 0.0481261
Ctcf	Pattern Name Modisco Significance metacluster_1/pattern_2 3.48984e-11	Pattern Name Homer Significance motif8.motif 0.00039568800000000005
Usf1	Pattern Name Modisco Significance metacluster_1/pattern_12 0.00344463	Pattern Name Homer Significance motif5.motif 0.0111797
Klf8	Pattern Name Modisco Significance metacluster_1/pattern_1 0.00106011	Pattern Name Homer Significance motif2.motif 0.0011252
Tfe3	Pattern Name Modisco Significance metacluster_1/pattern_12 0.00263423	Pattern Name Homer Significance motif5.motif 0.0182055
Npas2	Pattern Name Modisco Significance metacluster_1/pattern_12 0.00177726	Pattern Name Homer Significance motif5.motif 0.0182055
Klf4	Pattern Name Modisco Significance metacluster_1/pattern_1 0.000848547 metacluster_1/pattern_13 0.00212346	Pattern Name Homer Significance motif2.motif 0.000696145
Sp4	Pattern Name Modisco Significance metacluster_1/pattern_1 0.00126197 metacluster_1/pattern_13 0.0423524	Pattern Name Homer Significance motif2.motif 0.028457099999999996
Sp1	Pattern Name Modisco Significance metacluster_1/pattern_1 0.000302787 metacluster_1/pattern_8 7.01542e-05 metacluster_1/pattern_13 0.022856900000000003	Pattern Name Homer Significance motif2.motif 0.0073593
Bhlhe40	Pattern Name Modisco Significance metacluster_1/pattern_12 0.00998351	Pattern Name Homer Significance motif5.motif 0.0195262
Ehf	Pattern Name Modisco Significance metacluster_1/pattern_0 0.00208283	Pattern Name Homer Significance motif1.motif 0.0177755
Relb	Pattern Name Modisco Significance metacluster_1/pattern_5 3.31886e-06	Pattern Name Homer Significance motif10.motif 0.00328182
Thap11	Pattern Name Modisco Significance metacluster_1/pattern_9 6.69944e-23	Pattern Name Homer Significance motif4.motif 6.17151e-08
Bhlhe41	Pattern Name Modisco Significance metacluster_1/pattern_12 0.0160093	Pattern Name Homer Significance motif5.motif 0.0182055
Taf1	Pattern Name Modisco Significance metacluster_1/pattern_8 4.070159999999999e-06	Pattern Name Homer Significance motif11.motif 0.000261186
Elf3	Pattern Name Modisco Significance metacluster_1/pattern_0 0.00458455	Pattern Name Homer Significance motif1.motif 0.029227
Spib	Pattern Name Modisco Significance metacluster_1/pattern_0 1.4985499999999998e-06 metacluster_1/pattern_6 7.47772e-05	Pattern Name Homer Significance motif1.motif 0.029996699999999998
XP_911724.4	Pattern Name Modisco Significance metacluster_1/pattern_0 0.000448308	Pattern Name Homer Significance motif1.motif 7.52237e-05
Etv3	Pattern Name Modisco Significance metacluster_1/pattern_0 0.00034481199999999995	Pattern Name Homer Significance motif1.motif 5.43317e-05
Mlx	Pattern Name Modisco Significance metacluster_1/pattern_12 0.0236083	Pattern Name Homer Significance motif5.motif 0.0341287
Creb1	Pattern Name Modisco Significance metacluster_1/pattern_10 0.00290802	Pattern Name Homer Significance motif5.motif 0.0402636
Zbtb33	Pattern Name Modisco Significance metacluster_1/pattern_17 2.13096e-05	Pattern Name Homer Significance motif15.motif 3.01449e-07
Gabpa	Pattern Name Modisco Significance metacluster_1/pattern_0 0.00379386	Pattern Name Homer Significance motif1.motif 0.00565604
Nfya	Pattern Name Modisco Significance metacluster_1/pattern_4 5.45035e-11	Pattern Name Homer Significance motif3.motif 4.0683700000000003e-07
Arnt	Pattern Name Modisco Significance metacluster_1/pattern_12 0.0399651	Pattern Name Homer Significance motif5.motif 0.0398769
Klf5	Pattern Name Modisco Significance metacluster_1/pattern_1 0.000302787 metacluster_1/pattern_13 0.00166615	Pattern Name Homer Significance motif2.motif 0.028457099999999996
Atf1	Pattern Name Modisco Significance metacluster_1/pattern_10 0.0217115 metacluster_1/pattern_12 0.0138435	Pattern Name Homer Significance motif5.motif 0.037829
Elf2	Pattern Name Modisco Significance metacluster_1/pattern_0 0.00726463	Pattern Name Homer Significance motif1.motif 0.0117146
Etv1	Pattern Name Modisco Significance metacluster_1/pattern_0 0.00145227	Pattern Name Homer Significance motif1.motif 0.000143625
Klf12	Pattern Name Modisco Significance metacluster_1/pattern_1 0.00118458	Pattern Name Homer Significance motif2.motif 0.021580000000000002
Zfx	Pattern Name Modisco Significance metacluster_1/pattern_8 0.0023710999999999997 metacluster_1/pattern_10 0.0345825	Pattern Name Homer Significance motif2.motif 0.028457099999999996
Jdp2	Pattern Name Modisco Significance metacluster_1/pattern_10 0.000753187 metacluster_1/pattern_14 1.1256500000000001e-05	Pattern Name Homer Significance motif5.motif 0.043881800000000006
Etv4	Pattern Name Modisco Significance metacluster_1/pattern_0 0.00138253	Pattern Name Homer Significance motif1.motif 0.0040088
Erg	Pattern Name Modisco Significance metacluster_1/pattern_0 0.000385311	Pattern Name Homer Significance motif1.motif 0.00106914
Pou2f2	Pattern Name Modisco Significance metacluster_1/pattern_11 0.00729603	Pattern Name Homer Significance motif6.motif 0.00483249
Srebf1	Pattern Name Modisco Significance metacluster_1/pattern_12 0.00304618	Pattern Name Homer Significance motif5.motif 0.058812699999999996
Yy1	Pattern Name Modisco Significance metacluster_1/pattern_8 5.816180000000001e-06	Pattern Name Homer Significance motif11.motif 6.2863e-06
Fli1	Pattern Name Modisco Significance metacluster_1/pattern_0 0.00244253	Pattern Name Homer Significance motif1.motif 0.00150245
Etv2	Pattern Name Modisco Significance metacluster_1/pattern_0 0.00029281099999999997	Pattern Name Homer Significance motif1.motif 0.0040088
Zfp143	Pattern Name Modisco Significance metacluster_1/pattern_9 2.8601999999999994e-23	Pattern Name Homer Significance motif4.motif 8.694150000000001e-08
Spdef	Pattern Name Modisco Significance metacluster_1/pattern_0 0.0108871	Pattern Name Homer Significance motif1.motif 0.00675202
Elf4	Pattern Name Modisco Significance metacluster_1/pattern_0 0.00034481199999999995	Pattern Name Homer Significance motif1.motif 0.000139484
Sp2	Pattern Name Modisco Significance metacluster_1/pattern_1 5.623200000000001e-10 metacluster_1/pattern_8 5.76845e-05 metacluster_1/pattern_13 8.19429e-06	Pattern Name Homer Significance motif2.motif 0.000696145
Nrf1	Pattern Name Modisco Significance metacluster_1/pattern_3 1.64221e-07	Pattern Name Homer Significance motif7.motif 1.24108e-06
Elk4	Pattern Name Modisco Significance metacluster_1/pattern_0 0.00124349	Pattern Name Homer Significance motif1.motif 0.00038041
E2f4	Pattern Name Modisco Significance metacluster_1/pattern_1 0.00038088699999999995	Pattern Name Homer Significance motif2.motif 0.000696145
Tfec	Pattern Name Modisco Significance metacluster_1/pattern_10 0.056323000000000005 metacluster_1/pattern_12 0.00244741	Pattern Name Homer Significance motif5.motif 0.0182055
Nfkb2	Pattern Name Modisco Significance metacluster_1/pattern_5 5.670940000000001e-10	Pattern Name Homer Significance motif10.motif 0.00575366
Elk3	Pattern Name Modisco Significance metacluster_1/pattern_0 0.00109085	Pattern Name Homer Significance motif1.motif 0.000602849
Sp3	Pattern Name Modisco Significance metacluster_1/pattern_1 6.47795e-09 metacluster_1/pattern_8 0.000239061 metacluster_1/pattern_13 3.932380000000001e-06	Pattern Name Homer Significance motif2.motif 0.000971202
Etv5	Pattern Name Modisco Significance metacluster_1/pattern_0 0.00124349	Pattern Name Homer Significance motif1.motif 5.92184e-05
Nfyb	Pattern Name Modisco Significance metacluster_1/pattern_4 6.66253e-12	Pattern Name Homer Significance motif3.motif 1.64372e-09
Klf1	Pattern Name Modisco Significance metacluster_1/pattern_1 0.021090900000000003 metacluster_1/pattern_13 0.0165505	Pattern Name Homer Significance motif2.motif 0.0505056

Unique TF-MoDISco TFs: #64

TF Name	Modisco	Homer
Fosb	Pattern Name Modisco Significance metacluster_1/pattern_14 0.00037167099999999996	Absent
Irf2	Pattern Name Modisco Significance metacluster_1/pattern_0 0.00234303 metacluster_1/pattern_6 0.00373727	Absent
Ebf1	Pattern Name Modisco Significance metacluster_1/pattern_7 0.000232146	Absent
Stat2	Pattern Name Modisco Significance metacluster_1/pattern_6 0.00170804	Absent
Nfe2	Pattern Name Modisco Significance metacluster_1/pattern_14 0.00561876	Absent
Mafk	Pattern Name Modisco Significance metacluster_1/pattern_14 0.019876400000000002	Absent
Sall4	Pattern Name Modisco Significance metacluster_1/pattern_13 0.0560816	Absent
Rfx3	Pattern Name Modisco Significance metacluster_1/pattern_16 0.00160181	Absent
Crem	Pattern Name Modisco Significance metacluster_1/pattern_10 0.0151733	Absent
Hes1	Pattern Name Modisco Significance metacluster_1/pattern_12 0.0570861	Absent
Irf9	Pattern Name Modisco Significance metacluster_1/pattern_6 0.00280829	Absent
Sp5	Pattern Name Modisco Significance metacluster_1/pattern_1 0.000531396 metacluster_1/pattern_13 4.08027e-05	Absent
Creb5	Pattern Name Modisco Significance metacluster_1/pattern_10 0.000974535	Absent
Batf3	Pattern Name Modisco Significance metacluster_1/pattern_6 0.00899793	Absent
Bach1	Pattern Name Modisco Significance metacluster_1/pattern_14 0.00724497	Absent
Rfx1	Pattern Name Modisco Significance metacluster_1/pattern_8 0.0265361 metacluster_1/pattern_16 1.37582e-10	Absent
Zfp740	Pattern Name Modisco Significance metacluster_1/pattern_1 0.0571711 metacluster_1/pattern_13 0.0148643	Absent
Jun	Pattern Name Modisco Significance metacluster_1/pattern_10 0.0345825 metacluster_1/pattern_14 0.0253057	Absent
Atf2	Pattern Name Modisco Significance metacluster_1/pattern_10 0.000974535	Absent
Dbp	Pattern Name Modisco Significance metacluster_1/pattern_12 0.0557159	Absent
Irf8	Pattern Name Modisco Significance metacluster_1/pattern_0 3.35677e-05 metacluster_1/pattern_6 1.73275e-07	Absent
Mef2c	Pattern Name Modisco Significance metacluster_1/pattern_15 7.381770000000001e-09	Absent
Batf	Pattern Name Modisco Significance metacluster_1/pattern_14 0.00386062	Absent
E2f1	Pattern Name Modisco Significance metacluster_1/pattern_1 0.021090900000000003 metacluster_1/pattern_13 0.027978899999999998	Absent
Srebf2	Pattern Name Modisco Significance metacluster_1/pattern_1 0.047717 metacluster_1/pattern_12 0.0041278999999999995	Absent
Stat1	Pattern Name Modisco Significance metacluster_1/pattern_6 0.00231603	Absent
Maf	Pattern Name Modisco Significance metacluster_1/pattern_14 0.0575552	Absent
Irf3	Pattern Name Modisco Significance metacluster_1/pattern_0 0.00145418 metacluster_1/pattern_6 0.024406900000000002	Absent
Fosl1	Pattern Name Modisco Significance metacluster_1/pattern_10 0.035245099999999994 metacluster_1/pattern_14 0.037288199999999994	Absent
Zbtb17	Pattern Name Modisco Significance metacluster_1/pattern_1 0.000204677 metacluster_1/pattern_8 0.00934548 metacluster_1/pattern_13 1.19875e-08	Absent
Mafb	Pattern Name Modisco Significance metacluster_1/pattern_14 0.0318571	Absent
Jund	Pattern Name Modisco Significance metacluster_1/pattern_14 0.00306481	Absent
E2f7	Pattern Name Modisco Significance metacluster_1/pattern_13 0.0320335	Absent
Tcfl5	Pattern Name Modisco Significance metacluster_1/pattern_12 0.00571925	Absent
Maff	Pattern Name Modisco Significance metacluster_1/pattern_14 0.047649199999999996	Absent
Rfx7	Pattern Name Modisco Significance metacluster_1/pattern_16 0.00067774	Absent
Junb	Pattern Name Modisco Significance metacluster_1/pattern_14 0.0130168	Absent
Atf7	Pattern Name Modisco Significance metacluster_1/pattern_10 0.000406855	Absent
Rfx6	Pattern Name Modisco Significance metacluster_1/pattern_16 0.00160348	Absent
Bcl6	Pattern Name Modisco Significance metacluster_1/pattern_13 0.0320335	Absent
Rxrb	Pattern Name Modisco Significance metacluster_1/pattern_10 0.038458400000000004	Absent
Mef2d	Pattern Name Modisco Significance metacluster_1/pattern_15 7.254069999999999e-10	Absent
Fos	Pattern Name Modisco Significance metacluster_1/pattern_14 0.000771658	Absent
Prdm1	Pattern Name Modisco Significance metacluster_1/pattern_0 0.00140989 metacluster_1/pattern_6 0.00341795	Absent
Nfil3	Pattern Name Modisco Significance metacluster_1/pattern_10 0.0547845	Absent
Creb3l2	Pattern Name Modisco Significance metacluster_1/pattern_10 0.0547845 metacluster_1/pattern_12 0.0509119	Absent
Prdm16	Pattern Name Modisco Significance metacluster_1/pattern_7 0.00638628	Absent
Irf4	Pattern Name Modisco Significance metacluster_1/pattern_0 3.92321e-05 metacluster_1/pattern_6 0.00280829	Absent
Zfp281	Pattern Name Modisco Significance metacluster_1/pattern_1 0.00156682 metacluster_1/pattern_13 0.0041741999999999994	Absent
Fosl2	Pattern Name Modisco Significance metacluster_1/pattern_10 0.016981200000000002 metacluster_1/pattern_14 0.00123035	Absent
Rfx4	Pattern Name Modisco Significance metacluster_1/pattern_16 7.75422e-05	Absent
Nfe2l2	Pattern Name Modisco Significance metacluster_1/pattern_14 0.00746671	Absent
Klf15	Pattern Name Modisco Significance metacluster_1/pattern_1 0.021090900000000003 metacluster_1/pattern_13 1.3319e-05	Absent
Irf7	Pattern Name Modisco Significance metacluster_1/pattern_6 0.000863635	Absent
Wt1	Pattern Name Modisco Significance metacluster_1/pattern_1 0.00106011 metacluster_1/pattern_8 0.0265361 metacluster_1/pattern_13 4.08027e-05	Absent
Egr2	Pattern Name Modisco Significance metacluster_1/pattern_1 0.00444277 metacluster_1/pattern_8 0.0467184 metacluster_1/pattern_13 0.0083182	Absent
Hlf	Pattern Name Modisco Significance metacluster_1/pattern_12 0.05158719999999999	Absent
Bach2	Pattern Name Modisco Significance metacluster_1/pattern_14 0.00412634	Absent
Rfx2	Pattern Name Modisco Significance metacluster_1/pattern_16 7.00563e-09	Absent
Maz	Pattern Name Modisco Significance metacluster_1/pattern_1 0.00424401 metacluster_1/pattern_8 0.0265361 metacluster_1/pattern_13 1.20553e-06	Absent
Mafa	Pattern Name Modisco Significance metacluster_1/pattern_14 0.0256219	Absent
Mafg	Pattern Name Modisco Significance metacluster_1/pattern_14 0.037025999999999996	Absent
Irf1	Pattern Name Modisco Significance metacluster_1/pattern_0 0.00371213 metacluster_1/pattern_6 1.73275e-07	Absent
Mef2a	Pattern Name Modisco Significance metacluster_1/pattern_15 0.000118275	Absent

Unique Homer TFs: #4

TF Name	Modisco	Homer
Pou5f1	Absent	Pattern Name Homer Significance motif6.motif 0.015379599999999998
Nanog	Absent	Pattern Name Homer Significance motif6.motif 0.015379599999999998
Epas1	Absent	Pattern Name Homer Significance motif5.motif 0.0245439
Zbtb1	Absent	Pattern Name Homer Significance motif2.motif 0.0505056