In [1]:
# Parameters
data_name = "LVR;P0;D;En"
modisco_root = "/srv/scratch/msharmin/mouse_hem/with_tfd/full_mouse50/Naive_modisco2019"
tomtom_report_root = "http://mitra.stanford.edu/kundaje/msharmin/report/tomtom_outs/cells"
task_dir = "task_226-naivegw"
perf_file = "/srv/scratch/msharmin/mouse_hem/with_tfd/full_mouse50/fineFactorized/task_226-naivegw/NaiveauPRC.txt"
homer_root = "/srv/scratch/msharmin/mouse_hem/with_tfd/full_mouse50/Naive_scans"
reportfile = "/mnt/lab_data/kundaje/msharmin/annotations/filtering samples_MS2.xlsx"
sheetname = "filter23"
In [2]:
from matlas.reports import display_metadata
load data from labcluster
Using TensorFlow backend.
2019-08-30 19:31:11,787 [WARNING] git-lfs not installed
In [3]:
display_metadata(data_name, perf_file, reportfile, sheetname)
    Sample Information
    MetaData NameDescription
    Cell typeliver(P0)
    Cell GroupOther Tissues
    Experiment NameDHS
    Experiment GroupENCODE
    Pipeline Output
    replicateNaïve overlap peaksIDR peaksTSS enrichment (< 8 is very poor <10 is low)Final number of unique mapping, dup-filtered, chrM filtered readsNumber of reads in called peak regionsFraction of reads in called peak regionsNumber of reads in promoter regionsFraction of reads in promoter regionsNumber of reads in enhancer regionsFraction of reads in enhancer regions
    rep1135095842596.4269132422169115915210.087583971780.0634457494680.3455
    Modelling Metadata
    MetricValue
    auPRC0.5073
    Calibrated Recall at 50% FDR0.262
    Number of Positive Examples in Test Data41708
    Number of Negative Examples in Test Data8029143
    Imbalance Ratio in Test Data0.0052
    Test Chromosomeschr2, chr3, chr19
In [4]:
from matlas.reports import display_paiwise_pattern_comparison
from matlas.reports import display_denovo_patterns
In [5]:
display_denovo_patterns(data_name, modisco_root=modisco_root)
TF-MoDISco is using the TensorFlow backend.
The following two links show list of Denovo Patterns and corresponding Motifs discovered by TF-MoDISco
Click here for Denovo Patterns by TF-MoDISco: #21
Pattern NameTF Name(s)Modisco
metacluster_1/pattern_0 # seqlets: 5545 SequenceContrib ScoresHyp_Contrib Scores
Ctcf, Ctcfl
metacluster_1/pattern_1 # seqlets: 4498 SequenceContrib ScoresHyp_Contrib Scores
Sp4, Sp2, Klf3, Sp3, Sp1, Klf6, E2f4, Klf7, Klf4, Klf8,

Klf1, Klf12, Egr1, Zbtb17, Egr2, E2f1, Klf5, Sp5, Zfp281, Zfx, Zfp740,

Egr3, Zbtb1
metacluster_1/pattern_2 # seqlets: 3237 SequenceContrib ScoresHyp_Contrib Scores
Etv6, Spi1, Elk1, Gabpa, Spib, Ets1, Etv3, Fli1, Erg, XP_911724.4,

Elf4, Spic, Etv2, Etv4, Elf1, Elk3, Elk4, Irf8, Irf4, Etv5, Elf2,

Etv1, Ehf, Elf5, Elf3, Spdef, Fev, Irf2, Prdm1, Irf3, Irf1
metacluster_1/pattern_3 # seqlets: 1736 SequenceContrib ScoresHyp_Contrib Scores
Nfyb, Foxi1, Nfyc, Nfya, Pbx3
metacluster_1/pattern_4 # seqlets: 1609 SequenceContrib ScoresHyp_Contrib Scores
Nrf1
metacluster_1/pattern_5 # seqlets: 1427 SequenceContrib ScoresHyp_Contrib Scores
Cebpb, Cebpa, Cebpd, Cebpg, Cebpe, Dbp, Nfil3, Hlf, Ddit3, Atf4,

Tef
metacluster_1/pattern_6 # seqlets: 832 SequenceContrib ScoresHyp_Contrib Scores
Zfp143, Thap11, Tbx2
metacluster_1/pattern_7 # seqlets: 812 SequenceContrib ScoresHyp_Contrib Scores
Gata1, Tal1, Gata5, Gata6, Gata4, Gata3, Gata2
metacluster_1/pattern_8 # seqlets: 722 SequenceContrib ScoresHyp_Contrib Scores
Creb1, Jdp2, Atf7, Atf2, Atf1, Usf2, Atf3, Crem, Creb5, Fosl2,

Fosl1, Jun, Creb3l2
metacluster_1/pattern_9 # seqlets: 715 SequenceContrib ScoresHyp_Contrib Scores
Taf1, Yy1, Zfp42
metacluster_1/pattern_10 # seqlets: 683 SequenceContrib ScoresHyp_Contrib Scores
Hnf4g, Hnf4a, Nr1h3, Rxra, Nr2f6, Rxrb, Nr2c2, Ppara, Nr2f1, Pparg,

Nr2c1, Rarg, Rara, Rarb, Nr5a1, Nr4a2, Nr5a2, Nr2f2, Nr2e3
metacluster_1/pattern_11 # seqlets: 484 SequenceContrib ScoresHyp_Contrib Scores
Hnf1b, Hnf1a
metacluster_1/pattern_12 # seqlets: 408 SequenceContrib ScoresHyp_Contrib Scores
Usf1, Tfeb, Tfec, Arntl, Mitf, Tfe3, Srebf1, Bhlhe40, Mlx, Clock,

Arnt, Npas2, Srebf2, Tcfl5, Bhlhe41, Xbp1, Mlxip
metacluster_1/pattern_13 # seqlets: 406 SequenceContrib ScoresHyp_Contrib Scores
Nfia, Nfib, Nfic
metacluster_1/pattern_14 # seqlets: 282 SequenceContrib ScoresHyp_Contrib Scores
Foxa2, Foxa1, Foxa3, Foxm1, Foxd1, Foxd3, Foxc1, Foxc2, Foxb1, Foxl1,

Foxj2, Foxl2, Foxg1, Foxk1, Foxp2, Gm5294, Foxj3, Foxo1, Foxo3, Foxp1, Foxq1,

Foxj1
metacluster_1/pattern_15 # seqlets: 252 SequenceContrib ScoresHyp_Contrib Scores
Rfx1, Rfx3, Rfx2, Rfx4, Rfx7, Rfx6
metacluster_1/pattern_16 # seqlets: 252 SequenceContrib ScoresHyp_Contrib Scores
Fos, Jund, Batf, Fosb, Mafk, Bach2, Junb, Mafg, Mafb, Nfe2l2,

Nfe2, Maff, Maf, Mafa, Bach1
metacluster_1/pattern_17 # seqlets: 247 SequenceContrib ScoresHyp_Contrib Scores
Zbtb33
metacluster_1/pattern_18 # seqlets: 172 SequenceContrib ScoresHyp_Contrib Scores
Pou2f2
metacluster_1/pattern_19 # seqlets: 49 SequenceContrib ScoresHyp_Contrib Scores
metacluster_1/pattern_20 # seqlets: 46 SequenceContrib ScoresHyp_Contrib Scores
Rest
Click here for Motifs by TF-MoDISco: #186
TF NamePattern(s)
Ctcf
Pattern NameModiscoSignificance
metacluster_1/pattern_05.42988e-16
Ctcfl
Pattern NameModiscoSignificance
metacluster_1/pattern_07.777260000000001e-08
Sp4
Pattern NameModiscoSignificance
metacluster_1/pattern_10.00173149
Sp2
Pattern NameModiscoSignificance
metacluster_1/pattern_14.210299999999999e-06
Klf3
Pattern NameModiscoSignificance
metacluster_1/pattern_14.210299999999999e-06
Sp3
Pattern NameModiscoSignificance
metacluster_1/pattern_14.210299999999999e-06
Sp1
Pattern NameModiscoSignificance
metacluster_1/pattern_10.000505394
Klf6
Pattern NameModiscoSignificance
metacluster_1/pattern_10.000313941
E2f4
Pattern NameModiscoSignificance
metacluster_1/pattern_10.00041944
Klf7
Pattern NameModiscoSignificance
metacluster_1/pattern_10.000477686
Klf4
Pattern NameModiscoSignificance
metacluster_1/pattern_10.00915598
Klf8
Pattern NameModiscoSignificance
metacluster_1/pattern_10.000672383
Klf1
Pattern NameModiscoSignificance
metacluster_1/pattern_10.0377666
Klf12
Pattern NameModiscoSignificance
metacluster_1/pattern_10.00915598
Egr1
Pattern NameModiscoSignificance
metacluster_1/pattern_10.0442085
Zbtb17
Pattern NameModiscoSignificance
metacluster_1/pattern_10.00618438
Egr2
Pattern NameModiscoSignificance
metacluster_1/pattern_10.0424805
E2f1
Pattern NameModiscoSignificance
metacluster_1/pattern_10.0126684
Klf5
Pattern NameModiscoSignificance
metacluster_1/pattern_10.0163308
Sp5
Pattern NameModiscoSignificance
metacluster_1/pattern_10.017439
Zfp281
Pattern NameModiscoSignificance
metacluster_1/pattern_10.0236821
Zfx
Pattern NameModiscoSignificance
metacluster_1/pattern_10.0442085
metacluster_1/pattern_40.0456748
Zfp740
Pattern NameModiscoSignificance
metacluster_1/pattern_10.0497222
Egr3
Pattern NameModiscoSignificance
metacluster_1/pattern_10.0538114
Zbtb1
Pattern NameModiscoSignificance
metacluster_1/pattern_10.05517180000000001
Etv6
Pattern NameModiscoSignificance
metacluster_1/pattern_20.00193811
Spi1
Pattern NameModiscoSignificance
metacluster_1/pattern_20.000382487
Elk1
Pattern NameModiscoSignificance
metacluster_1/pattern_20.000244482
Gabpa
Pattern NameModiscoSignificance
metacluster_1/pattern_20.00462097
Spib
Pattern NameModiscoSignificance
metacluster_1/pattern_25.48666e-05
Ets1
Pattern NameModiscoSignificance
metacluster_1/pattern_25.48666e-05
Etv3
Pattern NameModiscoSignificance
metacluster_1/pattern_27.14235e-05
Fli1
Pattern NameModiscoSignificance
metacluster_1/pattern_20.000777485
Erg
Pattern NameModiscoSignificance
metacluster_1/pattern_28.00332e-05
XP_911724.4
Pattern NameModiscoSignificance
metacluster_1/pattern_27.49368e-05
Elf4
Pattern NameModiscoSignificance
metacluster_1/pattern_29.3101e-05
Spic
Pattern NameModiscoSignificance
metacluster_1/pattern_20.000158596
Etv2
Pattern NameModiscoSignificance
metacluster_1/pattern_29.57367e-05
Etv4
Pattern NameModiscoSignificance
metacluster_1/pattern_20.000313008
Elf1
Pattern NameModiscoSignificance
metacluster_1/pattern_20.00010154700000000001
Elk3
Pattern NameModiscoSignificance
metacluster_1/pattern_20.00020529400000000002
Elk4
Pattern NameModiscoSignificance
metacluster_1/pattern_20.000244482
Irf8
Pattern NameModiscoSignificance
metacluster_1/pattern_20.000157992
Irf4
Pattern NameModiscoSignificance
metacluster_1/pattern_20.000158596
Etv5
Pattern NameModiscoSignificance
metacluster_1/pattern_20.000158596
Elf2
Pattern NameModiscoSignificance
metacluster_1/pattern_20.0253955
Etv1
Pattern NameModiscoSignificance
metacluster_1/pattern_20.000382487
Ehf
Pattern NameModiscoSignificance
metacluster_1/pattern_20.00086491
Elf5
Pattern NameModiscoSignificance
metacluster_1/pattern_20.0253955
Elf3
Pattern NameModiscoSignificance
metacluster_1/pattern_20.0026235
Spdef
Pattern NameModiscoSignificance
metacluster_1/pattern_20.00338762
Fev
Pattern NameModiscoSignificance
metacluster_1/pattern_20.0048419
Irf2
Pattern NameModiscoSignificance
metacluster_1/pattern_20.00714281
Prdm1
Pattern NameModiscoSignificance
metacluster_1/pattern_20.00797796
Irf3
Pattern NameModiscoSignificance
metacluster_1/pattern_20.0103029
Irf1
Pattern NameModiscoSignificance
metacluster_1/pattern_20.012827600000000002
Nfyb
Pattern NameModiscoSignificance
metacluster_1/pattern_31.5495e-10
Foxi1
Pattern NameModiscoSignificance
metacluster_1/pattern_36.15393e-06
Nfyc
Pattern NameModiscoSignificance
metacluster_1/pattern_36.15393e-06
Nfya
Pattern NameModiscoSignificance
metacluster_1/pattern_36.5256700000000005e-06
Pbx3
Pattern NameModiscoSignificance
metacluster_1/pattern_30.000191135
Nrf1
Pattern NameModiscoSignificance
metacluster_1/pattern_42.00483e-07
Cebpb
Pattern NameModiscoSignificance
metacluster_1/pattern_50.00401069
Cebpa
Pattern NameModiscoSignificance
metacluster_1/pattern_50.00341225
Cebpd
Pattern NameModiscoSignificance
metacluster_1/pattern_50.00624409
Cebpg
Pattern NameModiscoSignificance
metacluster_1/pattern_50.00962292
Cebpe
Pattern NameModiscoSignificance
metacluster_1/pattern_50.00607455
Dbp
Pattern NameModiscoSignificance
metacluster_1/pattern_50.0456267
metacluster_1/pattern_120.0459656
Nfil3
Pattern NameModiscoSignificance
metacluster_1/pattern_50.00224281
metacluster_1/pattern_80.017886700000000002
Hlf
Pattern NameModiscoSignificance
metacluster_1/pattern_50.00290736
metacluster_1/pattern_80.0591249
metacluster_1/pattern_120.0419936
Ddit3
Pattern NameModiscoSignificance
metacluster_1/pattern_50.0069755
Atf4
Pattern NameModiscoSignificance
metacluster_1/pattern_50.0109089
Tef
Pattern NameModiscoSignificance
metacluster_1/pattern_50.0395187
metacluster_1/pattern_80.0334574
Zfp143
Pattern NameModiscoSignificance
metacluster_1/pattern_64.41892e-21
Thap11
Pattern NameModiscoSignificance
metacluster_1/pattern_64.41892e-21
Tbx2
Pattern NameModiscoSignificance
metacluster_1/pattern_63.4188600000000003e-13
Gata1
Pattern NameModiscoSignificance
metacluster_1/pattern_70.0064702
Tal1
Pattern NameModiscoSignificance
metacluster_1/pattern_72.8763000000000002e-05
Gata5
Pattern NameModiscoSignificance
metacluster_1/pattern_71.34402e-05
Gata6
Pattern NameModiscoSignificance
metacluster_1/pattern_70.00128341
Gata4
Pattern NameModiscoSignificance
metacluster_1/pattern_70.013012600000000001
Gata3
Pattern NameModiscoSignificance
metacluster_1/pattern_70.05555319999999999
Gata2
Pattern NameModiscoSignificance
metacluster_1/pattern_70.00306285
Creb1
Pattern NameModiscoSignificance
metacluster_1/pattern_80.000998727
Jdp2
Pattern NameModiscoSignificance
metacluster_1/pattern_80.000699857
metacluster_1/pattern_160.0010488
Atf7
Pattern NameModiscoSignificance
metacluster_1/pattern_80.000156914
Atf2
Pattern NameModiscoSignificance
metacluster_1/pattern_80.00026995599999999996
Atf1
Pattern NameModiscoSignificance
metacluster_1/pattern_80.0242622
metacluster_1/pattern_120.014737
Usf2
Pattern NameModiscoSignificance
metacluster_1/pattern_80.0005389780000000001
metacluster_1/pattern_120.00416908
Atf3
Pattern NameModiscoSignificance
metacluster_1/pattern_80.000998727
metacluster_1/pattern_160.000182702
Crem
Pattern NameModiscoSignificance
metacluster_1/pattern_80.00254038
Creb5
Pattern NameModiscoSignificance
metacluster_1/pattern_80.000998727
Fosl2
Pattern NameModiscoSignificance
metacluster_1/pattern_80.00390056
metacluster_1/pattern_160.0559905
Fosl1
Pattern NameModiscoSignificance
metacluster_1/pattern_80.00760968
metacluster_1/pattern_160.0351269
Jun
Pattern NameModiscoSignificance
metacluster_1/pattern_80.0346902
metacluster_1/pattern_162.54937e-06
Creb3l2
Pattern NameModiscoSignificance
metacluster_1/pattern_80.0591249
metacluster_1/pattern_120.0505182
Taf1
Pattern NameModiscoSignificance
metacluster_1/pattern_92.5960900000000006e-06
Yy1
Pattern NameModiscoSignificance
metacluster_1/pattern_95.17186e-06
Zfp42
Pattern NameModiscoSignificance
metacluster_1/pattern_90.021896099999999998
Hnf4g
Pattern NameModiscoSignificance
metacluster_1/pattern_106.63758e-08
Hnf4a
Pattern NameModiscoSignificance
metacluster_1/pattern_103.39094e-05
Nr1h3
Pattern NameModiscoSignificance
metacluster_1/pattern_101.04093e-05
Rxra
Pattern NameModiscoSignificance
metacluster_1/pattern_100.054486400000000004
Nr2f6
Pattern NameModiscoSignificance
metacluster_1/pattern_100.013108600000000002
Rxrb
Pattern NameModiscoSignificance
metacluster_1/pattern_107.51891e-05
Nr2c2
Pattern NameModiscoSignificance
metacluster_1/pattern_107.51891e-05
Ppara
Pattern NameModiscoSignificance
metacluster_1/pattern_100.000324893
Nr2f1
Pattern NameModiscoSignificance
metacluster_1/pattern_100.000627175
Pparg
Pattern NameModiscoSignificance
metacluster_1/pattern_100.000787512
Nr2c1
Pattern NameModiscoSignificance
metacluster_1/pattern_100.00386846
Rarg
Pattern NameModiscoSignificance
metacluster_1/pattern_100.0418066
Rara
Pattern NameModiscoSignificance
metacluster_1/pattern_100.0399865
Rarb
Pattern NameModiscoSignificance
metacluster_1/pattern_100.012599299999999999
Nr5a1
Pattern NameModiscoSignificance
metacluster_1/pattern_100.015119899999999999
Nr4a2
Pattern NameModiscoSignificance
metacluster_1/pattern_100.0503598
Nr5a2
Pattern NameModiscoSignificance
metacluster_1/pattern_100.0503598
Nr2f2
Pattern NameModiscoSignificance
metacluster_1/pattern_100.040367400000000005
Nr2e3
Pattern NameModiscoSignificance
metacluster_1/pattern_100.0419981
Hnf1b
Pattern NameModiscoSignificance
metacluster_1/pattern_116.655760000000001e-08
Hnf1a
Pattern NameModiscoSignificance
metacluster_1/pattern_116.42121e-05
Usf1
Pattern NameModiscoSignificance
metacluster_1/pattern_120.0033744
Tfeb
Pattern NameModiscoSignificance
metacluster_1/pattern_120.00120837
Tfec
Pattern NameModiscoSignificance
metacluster_1/pattern_120.00318584
Arntl
Pattern NameModiscoSignificance
metacluster_1/pattern_120.00765696
Mitf
Pattern NameModiscoSignificance
metacluster_1/pattern_120.00234501
Tfe3
Pattern NameModiscoSignificance
metacluster_1/pattern_120.00349676
Srebf1
Pattern NameModiscoSignificance
metacluster_1/pattern_120.00254131
Bhlhe40
Pattern NameModiscoSignificance
metacluster_1/pattern_120.00646417
Mlx
Pattern NameModiscoSignificance
metacluster_1/pattern_120.0305005
Clock
Pattern NameModiscoSignificance
metacluster_1/pattern_120.038793400000000006
Arnt
Pattern NameModiscoSignificance
metacluster_1/pattern_120.040575
Npas2
Pattern NameModiscoSignificance
metacluster_1/pattern_120.00234501
Srebf2
Pattern NameModiscoSignificance
metacluster_1/pattern_120.00318584
Tcfl5
Pattern NameModiscoSignificance
metacluster_1/pattern_120.00425368
Bhlhe41
Pattern NameModiscoSignificance
metacluster_1/pattern_120.013944799999999999
Xbp1
Pattern NameModiscoSignificance
metacluster_1/pattern_120.049221100000000004
Mlxip
Pattern NameModiscoSignificance
metacluster_1/pattern_120.0557751
Nfia
Pattern NameModiscoSignificance
metacluster_1/pattern_132.4944499999999998e-05
Nfib
Pattern NameModiscoSignificance
metacluster_1/pattern_130.000311189
Nfic
Pattern NameModiscoSignificance
metacluster_1/pattern_130.00393057
Foxa2
Pattern NameModiscoSignificance
metacluster_1/pattern_140.0110326
metacluster_1/pattern_180.0595881
Foxa1
Pattern NameModiscoSignificance
metacluster_1/pattern_141.3465899999999999e-06
metacluster_1/pattern_180.00881725
Foxa3
Pattern NameModiscoSignificance
metacluster_1/pattern_143.1420299999999997e-06
metacluster_1/pattern_180.0466182
Foxm1
Pattern NameModiscoSignificance
metacluster_1/pattern_143.1420299999999997e-06
metacluster_1/pattern_180.0542183
Foxd1
Pattern NameModiscoSignificance
metacluster_1/pattern_143.1420299999999997e-06
metacluster_1/pattern_180.00881725
Foxd3
Pattern NameModiscoSignificance
metacluster_1/pattern_143.78292e-06
Foxc1
Pattern NameModiscoSignificance
metacluster_1/pattern_140.00922496
metacluster_1/pattern_180.033062400000000006
Foxc2
Pattern NameModiscoSignificance
metacluster_1/pattern_141.69973e-05
metacluster_1/pattern_180.00881725
Foxb1
Pattern NameModiscoSignificance
metacluster_1/pattern_142.66301e-05
metacluster_1/pattern_180.00420371
Foxl1
Pattern NameModiscoSignificance
metacluster_1/pattern_140.0008137719999999999
metacluster_1/pattern_180.033062400000000006
Foxj2
Pattern NameModiscoSignificance
metacluster_1/pattern_140.035845
Foxl2
Pattern NameModiscoSignificance
metacluster_1/pattern_140.000824081
Foxg1
Pattern NameModiscoSignificance
metacluster_1/pattern_140.00922496
metacluster_1/pattern_180.0527131
Foxk1
Pattern NameModiscoSignificance
metacluster_1/pattern_140.016193600000000002
Foxp2
Pattern NameModiscoSignificance
metacluster_1/pattern_140.010723200000000002
Gm5294
Pattern NameModiscoSignificance
metacluster_1/pattern_140.00607403
Foxj3
Pattern NameModiscoSignificance
metacluster_1/pattern_140.0454304
Foxo1
Pattern NameModiscoSignificance
metacluster_1/pattern_140.015690700000000002
Foxo3
Pattern NameModiscoSignificance
metacluster_1/pattern_140.0114619
Foxp1
Pattern NameModiscoSignificance
metacluster_1/pattern_140.0110326
Foxq1
Pattern NameModiscoSignificance
metacluster_1/pattern_140.0259017
Foxj1
Pattern NameModiscoSignificance
metacluster_1/pattern_140.0259017
Rfx1
Pattern NameModiscoSignificance
metacluster_1/pattern_152.2154400000000002e-14
Rfx3
Pattern NameModiscoSignificance
metacluster_1/pattern_150.00140581
Rfx2
Pattern NameModiscoSignificance
metacluster_1/pattern_156.747930000000001e-08
Rfx4
Pattern NameModiscoSignificance
metacluster_1/pattern_158.60877e-05
Rfx7
Pattern NameModiscoSignificance
metacluster_1/pattern_150.000862563
Rfx6
Pattern NameModiscoSignificance
metacluster_1/pattern_150.00232133
Fos
Pattern NameModiscoSignificance
metacluster_1/pattern_162.52747e-06
Jund
Pattern NameModiscoSignificance
metacluster_1/pattern_160.027475
Batf
Pattern NameModiscoSignificance
metacluster_1/pattern_160.03180209999999999
Fosb
Pattern NameModiscoSignificance
metacluster_1/pattern_160.00020930700000000002
Mafk
Pattern NameModiscoSignificance
metacluster_1/pattern_160.000255586
Bach2
Pattern NameModiscoSignificance
metacluster_1/pattern_160.00022065
Junb
Pattern NameModiscoSignificance
metacluster_1/pattern_160.00032691700000000003
Mafg
Pattern NameModiscoSignificance
metacluster_1/pattern_160.0007475110000000001
Mafb
Pattern NameModiscoSignificance
metacluster_1/pattern_160.00700325
Nfe2l2
Pattern NameModiscoSignificance
metacluster_1/pattern_160.00135647
Nfe2
Pattern NameModiscoSignificance
metacluster_1/pattern_160.0007475110000000001
Maff
Pattern NameModiscoSignificance
metacluster_1/pattern_160.000930438
Maf
Pattern NameModiscoSignificance
metacluster_1/pattern_160.0010488
Mafa
Pattern NameModiscoSignificance
metacluster_1/pattern_160.00254296
Bach1
Pattern NameModiscoSignificance
metacluster_1/pattern_160.00288971
Zbtb33
Pattern NameModiscoSignificance
metacluster_1/pattern_170.000251645
Pou2f2
Pattern NameModiscoSignificance
metacluster_1/pattern_180.039693
Rest
Pattern NameModiscoSignificance
metacluster_1/pattern_202.61357e-13
In [6]:
display_paiwise_pattern_comparison(data_name, modisco_root, homer_root)
Number of CISBP TFs obtained by TF-MoDISco and Homer
Shared TFs between TF-MoDISco and Homer: #98
TF NameModiscoHomer
Foxo1
Pattern NameModiscoSignificance
metacluster_1/pattern_140.015690700000000002
Pattern NameHomerSignificance
motif16.motif0.00540539
E2f4
Pattern NameModiscoSignificance
metacluster_1/pattern_10.00041944
Pattern NameHomerSignificance
motif2.motif0.000682762
Cebpe
Pattern NameModiscoSignificance
metacluster_1/pattern_50.00607455
Pattern NameHomerSignificance
motif9.motif0.000859115
Yy1
Pattern NameModiscoSignificance
metacluster_1/pattern_95.17186e-06
Pattern NameHomerSignificance
motif12.motif1.6546500000000001e-06
Nfyc
Pattern NameModiscoSignificance
metacluster_1/pattern_36.15393e-06
Pattern NameHomerSignificance
motif4.motif2.0394200000000002e-05
Sp4
Pattern NameModiscoSignificance
metacluster_1/pattern_10.00173149
Pattern NameHomerSignificance
motif2.motif0.0227305
Klf5
Pattern NameModiscoSignificance
metacluster_1/pattern_10.0163308
Pattern NameHomerSignificance
motif2.motif0.00829715
Klf4
Pattern NameModiscoSignificance
metacluster_1/pattern_10.00915598
Pattern NameHomerSignificance
motif2.motif0.0272684
Sp2
Pattern NameModiscoSignificance
metacluster_1/pattern_14.210299999999999e-06
Pattern NameHomerSignificance
motif2.motif0.00011715799999999999
Usf1
Pattern NameModiscoSignificance
metacluster_1/pattern_120.0033744
Pattern NameHomerSignificance
motif7.motif0.059677999999999995
Hnf1a
Pattern NameModiscoSignificance
metacluster_1/pattern_116.42121e-05
Pattern NameHomerSignificance
motif14.motif0.00194577
Klf7
Pattern NameModiscoSignificance
metacluster_1/pattern_10.000477686
Pattern NameHomerSignificance
motif2.motif0.000217874
Atf7
Pattern NameModiscoSignificance
metacluster_1/pattern_80.000156914
Pattern NameHomerSignificance
motif7.motif0.05495359999999999
motif9.motif0.032736400000000006
Gata2
Pattern NameModiscoSignificance
metacluster_1/pattern_70.00306285
Pattern NameHomerSignificance
motif13.motif0.0015115
Gabpa
Pattern NameModiscoSignificance
metacluster_1/pattern_20.00462097
Pattern NameHomerSignificance
motif3.motif0.0172143
Etv5
Pattern NameModiscoSignificance
metacluster_1/pattern_20.000158596
Pattern NameHomerSignificance
motif3.motif0.00809265
Egr1
Pattern NameModiscoSignificance
metacluster_1/pattern_10.0442085
Pattern NameHomerSignificance
motif2.motif0.00806685
Etv3
Pattern NameModiscoSignificance
metacluster_1/pattern_27.14235e-05
Pattern NameHomerSignificance
motif3.motif0.00809265
Zfp143
Pattern NameModiscoSignificance
metacluster_1/pattern_64.41892e-21
Pattern NameHomerSignificance
motif5.motif5.15048e-07
XP_911724.4
Pattern NameModiscoSignificance
metacluster_1/pattern_27.49368e-05
Pattern NameHomerSignificance
motif3.motif0.00809265
Cebpg
Pattern NameModiscoSignificance
metacluster_1/pattern_50.00962292
Pattern NameHomerSignificance
motif9.motif0.00324762
Foxi1
Pattern NameModiscoSignificance
metacluster_1/pattern_36.15393e-06
Pattern NameHomerSignificance
motif4.motif0.00187456
Foxb1
Pattern NameModiscoSignificance
metacluster_1/pattern_142.66301e-05
metacluster_1/pattern_180.00420371
Pattern NameHomerSignificance
motif16.motif0.05762130000000001
Fli1
Pattern NameModiscoSignificance
metacluster_1/pattern_20.000777485
Pattern NameHomerSignificance
motif3.motif0.0297615
Atf4
Pattern NameModiscoSignificance
metacluster_1/pattern_50.0109089
Pattern NameHomerSignificance
motif9.motif0.0468017
Elf4
Pattern NameModiscoSignificance
metacluster_1/pattern_29.3101e-05
Pattern NameHomerSignificance
motif3.motif0.0341727
Foxo3
Pattern NameModiscoSignificance
metacluster_1/pattern_140.0114619
Pattern NameHomerSignificance
motif16.motif0.047843199999999995
Cebpb
Pattern NameModiscoSignificance
metacluster_1/pattern_50.00401069
Pattern NameHomerSignificance
motif9.motif0.000386509
Zfp42
Pattern NameModiscoSignificance
metacluster_1/pattern_90.021896099999999998
Pattern NameHomerSignificance
motif12.motif0.001118
Srebf1
Pattern NameModiscoSignificance
metacluster_1/pattern_120.00254131
Pattern NameHomerSignificance
motif7.motif0.05495359999999999
Nfyb
Pattern NameModiscoSignificance
metacluster_1/pattern_31.5495e-10
Pattern NameHomerSignificance
motif4.motif1.43696e-07
Atf1
Pattern NameModiscoSignificance
metacluster_1/pattern_80.0242622
metacluster_1/pattern_120.014737
Pattern NameHomerSignificance
motif7.motif0.05495359999999999
Etv1
Pattern NameModiscoSignificance
metacluster_1/pattern_20.000382487
Pattern NameHomerSignificance
motif3.motif0.0268485
Elf2
Pattern NameModiscoSignificance
metacluster_1/pattern_20.0253955
Pattern NameHomerSignificance
motif3.motif0.026506900000000003
Gata1
Pattern NameModiscoSignificance
metacluster_1/pattern_70.0064702
Pattern NameHomerSignificance
motif13.motif0.00234959
Klf8
Pattern NameModiscoSignificance
metacluster_1/pattern_10.000672383
Pattern NameHomerSignificance
motif2.motif0.00032510000000000004
Foxa2
Pattern NameModiscoSignificance
metacluster_1/pattern_140.0110326
metacluster_1/pattern_180.0595881
Pattern NameHomerSignificance
motif16.motif0.055944600000000004
Foxa1
Pattern NameModiscoSignificance
metacluster_1/pattern_141.3465899999999999e-06
metacluster_1/pattern_180.00881725
Pattern NameHomerSignificance
motif16.motif0.048130599999999996
Elk3
Pattern NameModiscoSignificance
metacluster_1/pattern_20.00020529400000000002
Pattern NameHomerSignificance
motif3.motif0.019737900000000003
Klf3
Pattern NameModiscoSignificance
metacluster_1/pattern_14.210299999999999e-06
Pattern NameHomerSignificance
motif2.motif8.133149999999999e-05
Foxg1
Pattern NameModiscoSignificance
metacluster_1/pattern_140.00922496
metacluster_1/pattern_180.0527131
Pattern NameHomerSignificance
motif16.motif0.00441521
Nfil3
Pattern NameModiscoSignificance
metacluster_1/pattern_50.00224281
metacluster_1/pattern_80.017886700000000002
Pattern NameHomerSignificance
motif9.motif0.0204151
Sp3
Pattern NameModiscoSignificance
metacluster_1/pattern_14.210299999999999e-06
Pattern NameHomerSignificance
motif2.motif0.000121269
Zbtb1
Pattern NameModiscoSignificance
metacluster_1/pattern_10.05517180000000001
Pattern NameHomerSignificance
motif2.motif0.0454126
Ehf
Pattern NameModiscoSignificance
metacluster_1/pattern_20.00086491
Pattern NameHomerSignificance
motif3.motif0.011912899999999999
Foxc1
Pattern NameModiscoSignificance
metacluster_1/pattern_140.00922496
metacluster_1/pattern_180.033062400000000006
Pattern NameHomerSignificance
motif16.motif0.0425904
Elk1
Pattern NameModiscoSignificance
metacluster_1/pattern_20.000244482
Pattern NameHomerSignificance
motif3.motif0.0172143
Hnf1b
Pattern NameModiscoSignificance
metacluster_1/pattern_116.655760000000001e-08
Pattern NameHomerSignificance
motif14.motif0.000109163
Hlf
Pattern NameModiscoSignificance
metacluster_1/pattern_50.00290736
metacluster_1/pattern_80.0591249
metacluster_1/pattern_120.0419936
Pattern NameHomerSignificance
motif9.motif0.00411666
Foxp2
Pattern NameModiscoSignificance
metacluster_1/pattern_140.010723200000000002
Pattern NameHomerSignificance
motif16.motif0.0425904
Gata5
Pattern NameModiscoSignificance
metacluster_1/pattern_71.34402e-05
Pattern NameHomerSignificance
motif13.motif0.00254251
Rxrb
Pattern NameModiscoSignificance
metacluster_1/pattern_107.51891e-05
Pattern NameHomerSignificance
motif7.motif0.05495359999999999
Sp1
Pattern NameModiscoSignificance
metacluster_1/pattern_10.000505394
Pattern NameHomerSignificance
motif2.motif0.00903995
Nfya
Pattern NameModiscoSignificance
metacluster_1/pattern_36.5256700000000005e-06
Pattern NameHomerSignificance
motif4.motif7.35834e-06
Creb1
Pattern NameModiscoSignificance
metacluster_1/pattern_80.000998727
Pattern NameHomerSignificance
motif7.motif0.05495359999999999
motif9.motif0.040968
Nrf1
Pattern NameModiscoSignificance
metacluster_1/pattern_42.00483e-07
Pattern NameHomerSignificance
motif6.motif6.68964e-09
Taf1
Pattern NameModiscoSignificance
metacluster_1/pattern_92.5960900000000006e-06
Pattern NameHomerSignificance
motif12.motif0.00224953
Foxj2
Pattern NameModiscoSignificance
metacluster_1/pattern_140.035845
Pattern NameHomerSignificance
motif16.motif0.047843199999999995
Erg
Pattern NameModiscoSignificance
metacluster_1/pattern_28.00332e-05
Pattern NameHomerSignificance
motif3.motif0.00895569
Klf1
Pattern NameModiscoSignificance
metacluster_1/pattern_10.0377666
Pattern NameHomerSignificance
motif2.motif0.015351400000000001
Creb5
Pattern NameModiscoSignificance
metacluster_1/pattern_80.000998727
Pattern NameHomerSignificance
motif7.motif0.05495359999999999
Cebpd
Pattern NameModiscoSignificance
metacluster_1/pattern_50.00624409
Pattern NameHomerSignificance
motif9.motif0.00128044
Tfe3
Pattern NameModiscoSignificance
metacluster_1/pattern_120.00349676
Pattern NameHomerSignificance
motif7.motif0.05495359999999999
Cebpa
Pattern NameModiscoSignificance
metacluster_1/pattern_50.00341225
Pattern NameHomerSignificance
motif9.motif0.0008594210000000001
Tbx2
Pattern NameModiscoSignificance
metacluster_1/pattern_63.4188600000000003e-13
Pattern NameHomerSignificance
motif5.motif2.8621e-05
Elf1
Pattern NameModiscoSignificance
metacluster_1/pattern_20.00010154700000000001
Pattern NameHomerSignificance
motif3.motif0.0434413
Gata6
Pattern NameModiscoSignificance
metacluster_1/pattern_70.00128341
Pattern NameHomerSignificance
motif13.motif0.00254251
Klf6
Pattern NameModiscoSignificance
metacluster_1/pattern_10.000313941
Pattern NameHomerSignificance
motif2.motif0.00100184
Pbx3
Pattern NameModiscoSignificance
metacluster_1/pattern_30.000191135
Pattern NameHomerSignificance
motif4.motif0.000601779
Tef
Pattern NameModiscoSignificance
metacluster_1/pattern_50.0395187
metacluster_1/pattern_80.0334574
Pattern NameHomerSignificance
motif9.motif0.00145295
Ets1
Pattern NameModiscoSignificance
metacluster_1/pattern_25.48666e-05
Pattern NameHomerSignificance
motif3.motif0.00809265
Foxa3
Pattern NameModiscoSignificance
metacluster_1/pattern_143.1420299999999997e-06
metacluster_1/pattern_180.0466182
Pattern NameHomerSignificance
motif16.motif0.047843199999999995
Foxj3
Pattern NameModiscoSignificance
metacluster_1/pattern_140.0454304
Pattern NameHomerSignificance
motif16.motif0.047843199999999995
Etv6
Pattern NameModiscoSignificance
metacluster_1/pattern_20.00193811
Pattern NameHomerSignificance
motif3.motif0.05391619999999999
Srebf2
Pattern NameModiscoSignificance
metacluster_1/pattern_120.00318584
Pattern NameHomerSignificance
motif7.motif0.05495359999999999
Klf12
Pattern NameModiscoSignificance
metacluster_1/pattern_10.00915598
Pattern NameHomerSignificance
motif2.motif0.00316744
Tfec
Pattern NameModiscoSignificance
metacluster_1/pattern_120.00318584
Pattern NameHomerSignificance
motif7.motif0.05495359999999999
Spdef
Pattern NameModiscoSignificance
metacluster_1/pattern_20.00338762
Pattern NameHomerSignificance
motif3.motif0.0378469
Crem
Pattern NameModiscoSignificance
metacluster_1/pattern_80.00254038
Pattern NameHomerSignificance
motif7.motif0.059677999999999995
Dbp
Pattern NameModiscoSignificance
metacluster_1/pattern_50.0456267
metacluster_1/pattern_120.0459656
Pattern NameHomerSignificance
motif9.motif0.00507212
Ctcfl
Pattern NameModiscoSignificance
metacluster_1/pattern_07.777260000000001e-08
Pattern NameHomerSignificance
motif1.motif0.00109598
Tfeb
Pattern NameModiscoSignificance
metacluster_1/pattern_120.00120837
Pattern NameHomerSignificance
motif7.motif0.059677999999999995
Tal1
Pattern NameModiscoSignificance
metacluster_1/pattern_72.8763000000000002e-05
Pattern NameHomerSignificance
motif13.motif0.00254251
Elf3
Pattern NameModiscoSignificance
metacluster_1/pattern_20.0026235
Pattern NameHomerSignificance
motif3.motif0.0492022
Gata3
Pattern NameModiscoSignificance
metacluster_1/pattern_70.05555319999999999
Pattern NameHomerSignificance
motif13.motif0.0228304
Fev
Pattern NameModiscoSignificance
metacluster_1/pattern_20.0048419
Pattern NameHomerSignificance
motif3.motif0.0172143
Foxk1
Pattern NameModiscoSignificance
metacluster_1/pattern_140.016193600000000002
Pattern NameHomerSignificance
motif16.motif0.055052199999999996
Foxp1
Pattern NameModiscoSignificance
metacluster_1/pattern_140.0110326
Pattern NameHomerSignificance
motif16.motif0.048130599999999996
Zbtb33
Pattern NameModiscoSignificance
metacluster_1/pattern_170.000251645
Pattern NameHomerSignificance
motif10.motif0.00163651
Elf5
Pattern NameModiscoSignificance
metacluster_1/pattern_20.0253955
Pattern NameHomerSignificance
motif3.motif0.035961599999999996
Elk4
Pattern NameModiscoSignificance
metacluster_1/pattern_20.000244482
Pattern NameHomerSignificance
motif3.motif0.019737900000000003
Ctcf
Pattern NameModiscoSignificance
metacluster_1/pattern_05.42988e-16
Pattern NameHomerSignificance
motif1.motif0.00055243
Thap11
Pattern NameModiscoSignificance
metacluster_1/pattern_64.41892e-21
Pattern NameHomerSignificance
motif5.motif7.42683e-07
Jdp2
Pattern NameModiscoSignificance
metacluster_1/pattern_80.000699857
metacluster_1/pattern_160.0010488
Pattern NameHomerSignificance
motif7.motif0.05495359999999999
motif9.motif0.0113941
Foxd3
Pattern NameModiscoSignificance
metacluster_1/pattern_143.78292e-06
Pattern NameHomerSignificance
motif16.motif0.055944600000000004
Atf2
Pattern NameModiscoSignificance
metacluster_1/pattern_80.00026995599999999996
Pattern NameHomerSignificance
motif7.motif0.05495359999999999
motif9.motif0.0113941
Etv4
Pattern NameModiscoSignificance
metacluster_1/pattern_20.000313008
Pattern NameHomerSignificance
motif3.motif0.0268485
Gata4
Pattern NameModiscoSignificance
metacluster_1/pattern_70.013012600000000001
Pattern NameHomerSignificance
motif13.motif0.0134226
Unique TF-MoDISco TFs: #88
TF NameModiscoHomer
Usf2
Pattern NameModiscoSignificance
metacluster_1/pattern_80.0005389780000000001
metacluster_1/pattern_120.00416908
Absent
Foxd1
Pattern NameModiscoSignificance
metacluster_1/pattern_143.1420299999999997e-06
metacluster_1/pattern_180.00881725
Absent
Clock
Pattern NameModiscoSignificance
metacluster_1/pattern_120.038793400000000006
Absent
Atf3
Pattern NameModiscoSignificance
metacluster_1/pattern_80.000998727
metacluster_1/pattern_160.000182702
Absent
Rest
Pattern NameModiscoSignificance
metacluster_1/pattern_202.61357e-13
Absent
Ddit3
Pattern NameModiscoSignificance
metacluster_1/pattern_50.0069755
Absent
Nr4a2
Pattern NameModiscoSignificance
metacluster_1/pattern_100.0503598
Absent
Bhlhe41
Pattern NameModiscoSignificance
metacluster_1/pattern_120.013944799999999999
Absent
Nr2e3
Pattern NameModiscoSignificance
metacluster_1/pattern_100.0419981
Absent
Nfe2l2
Pattern NameModiscoSignificance
metacluster_1/pattern_160.00135647
Absent
Bach1
Pattern NameModiscoSignificance
metacluster_1/pattern_160.00288971
Absent
Foxl1
Pattern NameModiscoSignificance
metacluster_1/pattern_140.0008137719999999999
metacluster_1/pattern_180.033062400000000006
Absent
Sp5
Pattern NameModiscoSignificance
metacluster_1/pattern_10.017439
Absent
Hnf4a
Pattern NameModiscoSignificance
metacluster_1/pattern_103.39094e-05
Absent
Rfx2
Pattern NameModiscoSignificance
metacluster_1/pattern_156.747930000000001e-08
Absent
Zbtb17
Pattern NameModiscoSignificance
metacluster_1/pattern_10.00618438
Absent
Bach2
Pattern NameModiscoSignificance
metacluster_1/pattern_160.00022065
Absent
Jun
Pattern NameModiscoSignificance
metacluster_1/pattern_80.0346902
metacluster_1/pattern_162.54937e-06
Absent
Nr5a1
Pattern NameModiscoSignificance
metacluster_1/pattern_100.015119899999999999
Absent
Npas2
Pattern NameModiscoSignificance
metacluster_1/pattern_120.00234501
Absent
Arnt
Pattern NameModiscoSignificance
metacluster_1/pattern_120.040575
Absent
Maff
Pattern NameModiscoSignificance
metacluster_1/pattern_160.000930438
Absent
Nr1h3
Pattern NameModiscoSignificance
metacluster_1/pattern_101.04093e-05
Absent
Prdm1
Pattern NameModiscoSignificance
metacluster_1/pattern_20.00797796
Absent
Foxl2
Pattern NameModiscoSignificance
metacluster_1/pattern_140.000824081
Absent
Jund
Pattern NameModiscoSignificance
metacluster_1/pattern_160.027475
Absent
Egr3
Pattern NameModiscoSignificance
metacluster_1/pattern_10.0538114
Absent
Rarg
Pattern NameModiscoSignificance
metacluster_1/pattern_100.0418066
Absent
Tcfl5
Pattern NameModiscoSignificance
metacluster_1/pattern_120.00425368
Absent
Rfx1
Pattern NameModiscoSignificance
metacluster_1/pattern_152.2154400000000002e-14
Absent
Bhlhe40
Pattern NameModiscoSignificance
metacluster_1/pattern_120.00646417
Absent
Creb3l2
Pattern NameModiscoSignificance
metacluster_1/pattern_80.0591249
metacluster_1/pattern_120.0505182
Absent
Irf1
Pattern NameModiscoSignificance
metacluster_1/pattern_20.012827600000000002
Absent
Mlxip
Pattern NameModiscoSignificance
metacluster_1/pattern_120.0557751
Absent
Irf3
Pattern NameModiscoSignificance
metacluster_1/pattern_20.0103029
Absent
Fos
Pattern NameModiscoSignificance
metacluster_1/pattern_162.52747e-06
Absent
Nr2f6
Pattern NameModiscoSignificance
metacluster_1/pattern_100.013108600000000002
Absent
Foxq1
Pattern NameModiscoSignificance
metacluster_1/pattern_140.0259017
Absent
Mlx
Pattern NameModiscoSignificance
metacluster_1/pattern_120.0305005
Absent
Pou2f2
Pattern NameModiscoSignificance
metacluster_1/pattern_180.039693
Absent
Fosl2
Pattern NameModiscoSignificance
metacluster_1/pattern_80.00390056
metacluster_1/pattern_160.0559905
Absent
Rfx4
Pattern NameModiscoSignificance
metacluster_1/pattern_158.60877e-05
Absent
Etv2
Pattern NameModiscoSignificance
metacluster_1/pattern_29.57367e-05
Absent
E2f1
Pattern NameModiscoSignificance
metacluster_1/pattern_10.0126684
Absent
Maf
Pattern NameModiscoSignificance
metacluster_1/pattern_160.0010488
Absent
Nfib
Pattern NameModiscoSignificance
metacluster_1/pattern_130.000311189
Absent
Nr2c1
Pattern NameModiscoSignificance
metacluster_1/pattern_100.00386846
Absent
Gm5294
Pattern NameModiscoSignificance
metacluster_1/pattern_140.00607403
Absent
Foxj1
Pattern NameModiscoSignificance
metacluster_1/pattern_140.0259017
Absent
Pparg
Pattern NameModiscoSignificance
metacluster_1/pattern_100.000787512
Absent
Hnf4g
Pattern NameModiscoSignificance
metacluster_1/pattern_106.63758e-08
Absent
Rfx7
Pattern NameModiscoSignificance
metacluster_1/pattern_150.000862563
Absent
Mafk
Pattern NameModiscoSignificance
metacluster_1/pattern_160.000255586
Absent
Irf4
Pattern NameModiscoSignificance
metacluster_1/pattern_20.000158596
Absent
Junb
Pattern NameModiscoSignificance
metacluster_1/pattern_160.00032691700000000003
Absent
Spib
Pattern NameModiscoSignificance
metacluster_1/pattern_25.48666e-05
Absent
Foxc2
Pattern NameModiscoSignificance
metacluster_1/pattern_141.69973e-05
metacluster_1/pattern_180.00881725
Absent
Mafa
Pattern NameModiscoSignificance
metacluster_1/pattern_160.00254296
Absent
Egr2
Pattern NameModiscoSignificance
metacluster_1/pattern_10.0424805
Absent
Nr2c2
Pattern NameModiscoSignificance
metacluster_1/pattern_107.51891e-05
Absent
Nr5a2
Pattern NameModiscoSignificance
metacluster_1/pattern_100.0503598
Absent
Nr2f2
Pattern NameModiscoSignificance
metacluster_1/pattern_100.040367400000000005
Absent
Spic
Pattern NameModiscoSignificance
metacluster_1/pattern_20.000158596
Absent
Nr2f1
Pattern NameModiscoSignificance
metacluster_1/pattern_100.000627175
Absent
Rfx3
Pattern NameModiscoSignificance
metacluster_1/pattern_150.00140581
Absent
Mafg
Pattern NameModiscoSignificance
metacluster_1/pattern_160.0007475110000000001
Absent
Xbp1
Pattern NameModiscoSignificance
metacluster_1/pattern_120.049221100000000004
Absent
Foxm1
Pattern NameModiscoSignificance
metacluster_1/pattern_143.1420299999999997e-06
metacluster_1/pattern_180.0542183
Absent
Fosl1
Pattern NameModiscoSignificance
metacluster_1/pattern_80.00760968
metacluster_1/pattern_160.0351269
Absent
Rfx6
Pattern NameModiscoSignificance
metacluster_1/pattern_150.00232133
Absent
Arntl
Pattern NameModiscoSignificance
metacluster_1/pattern_120.00765696
Absent
Zfx
Pattern NameModiscoSignificance
metacluster_1/pattern_10.0442085
metacluster_1/pattern_40.0456748
Absent
Nfic
Pattern NameModiscoSignificance
metacluster_1/pattern_130.00393057
Absent
Fosb
Pattern NameModiscoSignificance
metacluster_1/pattern_160.00020930700000000002
Absent
Nfia
Pattern NameModiscoSignificance
metacluster_1/pattern_132.4944499999999998e-05
Absent
Zfp740
Pattern NameModiscoSignificance
metacluster_1/pattern_10.0497222
Absent
Spi1
Pattern NameModiscoSignificance
metacluster_1/pattern_20.000382487
Absent
Irf2
Pattern NameModiscoSignificance
metacluster_1/pattern_20.00714281
Absent
Ppara
Pattern NameModiscoSignificance
metacluster_1/pattern_100.000324893
Absent
Batf
Pattern NameModiscoSignificance
metacluster_1/pattern_160.03180209999999999
Absent
Mafb
Pattern NameModiscoSignificance
metacluster_1/pattern_160.00700325
Absent
Rxra
Pattern NameModiscoSignificance
metacluster_1/pattern_100.054486400000000004
Absent
Rara
Pattern NameModiscoSignificance
metacluster_1/pattern_100.0399865
Absent
Zfp281
Pattern NameModiscoSignificance
metacluster_1/pattern_10.0236821
Absent
Irf8
Pattern NameModiscoSignificance
metacluster_1/pattern_20.000157992
Absent
Mitf
Pattern NameModiscoSignificance
metacluster_1/pattern_120.00234501
Absent
Rarb
Pattern NameModiscoSignificance
metacluster_1/pattern_100.012599299999999999
Absent
Nfe2
Pattern NameModiscoSignificance
metacluster_1/pattern_160.0007475110000000001
Absent
Unique Homer TFs: #1
TF NameModiscoHomer
MypopAbsent
Pattern NameHomerSignificance
motif9.motif0.0306186