In [1]:
# Parameters
data_name = "ES;J1;A;CL"
modisco_root = "/srv/scratch/msharmin/mouse_hem/with_tfd/full_mouse50/Naive_modisco2019"
tomtom_report_root = "http://mitra.stanford.edu/kundaje/msharmin/report/tomtom_outs/cells"
task_dir = "task_98-naivegw"
perf_file = "/srv/scratch/msharmin/mouse_hem/with_tfd/full_mouse50/fineFactorized/task_98-naivegw/NaiveauPRC.txt"
homer_root = "/srv/scratch/msharmin/mouse_hem/with_tfd/full_mouse50/Naive_scans"
reportfile = "/mnt/lab_data/kundaje/msharmin/annotations/filtering samples_MS2.xlsx"
sheetname = "filter23"
In [2]:
from matlas.reports import display_metadata
load data from labcluster
Using TensorFlow backend.
2019-08-30 19:02:11,551 [WARNING] git-lfs not installed
In [3]:
display_metadata(data_name, perf_file, reportfile, sheetname)
    Sample Information
    MetaData NameDescription
    Cell typeJ1 embryonic stem cells
    Cell GroupES cells and embryonic tissues
    Experiment NameATAC
    Experiment GroupGEO
    Pipeline Output
    replicateNaïve overlap peaksIDR peaksTSS enrichment (< 8 is very poor <10 is low)Final number of unique mapping, dup-filtered, chrM filtered readsNumber of reads in called peak regionsFraction of reads in called peak regionsNumber of reads in promoter regionsFraction of reads in promoter regionsNumber of reads in enhancer regionsFraction of reads in enhancer regions
    rep1140739856598.91965403574965601880.121447712710.0883201020380.3721
    Modelling Metadata
    MetricValue
    auPRC0.6499
    Calibrated Recall at 50% FDR0.314
    Number of Positive Examples in Test Data83192
    Number of Negative Examples in Test Data7987659
    Imbalance Ratio in Test Data0.0103
    Test Chromosomeschr2, chr3, chr19
In [4]:
from matlas.reports import display_paiwise_pattern_comparison
from matlas.reports import display_denovo_patterns
In [5]:
display_denovo_patterns(data_name, modisco_root=modisco_root)
TF-MoDISco is using the TensorFlow backend.
The following two links show list of Denovo Patterns and corresponding Motifs discovered by TF-MoDISco
Click here for Denovo Patterns by TF-MoDISco: #21
Pattern NameTF Name(s)Modisco
metacluster_1/pattern_0 # seqlets: 3542 SequenceContrib ScoresHyp_Contrib Scores
Ctcf, Ctcfl
metacluster_1/pattern_1 # seqlets: 2948 SequenceContrib ScoresHyp_Contrib Scores
Sp4, Sp3, Klf3, Sp2, Sp1, Klf6, Klf4, Klf7, Klf8, Klf1,

Klf12, E2f4, Zbtb17, Egr1, Zfp281, Sp5, Egr2, Klf5, Sall4, Zscan10, E2f1,

Wt1, Klf15, Maz, Zfp740
metacluster_1/pattern_2 # seqlets: 2613 SequenceContrib ScoresHyp_Contrib Scores
Srebf2, Egr3, Zfx
metacluster_1/pattern_3 # seqlets: 2308 SequenceContrib ScoresHyp_Contrib Scores
Myc
metacluster_1/pattern_4 # seqlets: 1294 SequenceContrib ScoresHyp_Contrib Scores
Sox4, Sox3, Sox6, Sox2, Nanog, Sox17, Sox14, Sox12, Sox7, Sox5,

Sox8, Lef1, Sry, Sox18, Sox11, Sox9, Sox21, Pou5f1, Cux2, Tcf7, Sox15,

Sox10, Sox30, Tcf7l2, Tcf7l1
metacluster_1/pattern_5 # seqlets: 1235 SequenceContrib ScoresHyp_Contrib Scores
Pou2f2
metacluster_1/pattern_6 # seqlets: 1106 SequenceContrib ScoresHyp_Contrib Scores
Nfyb, Nfyc, Nfya, Foxi1, Pbx3
metacluster_1/pattern_7 # seqlets: 1022 SequenceContrib ScoresHyp_Contrib Scores
Nrf1
metacluster_1/pattern_8 # seqlets: 729 SequenceContrib ScoresHyp_Contrib Scores
Elf1, Gabpa, Elk1, Fli1, Elk4, Elk3, Ets1, Erg, Fev, Etv5,

Elf5, Etv1, Etv4, Elf2, Elf4, Etv6, Ehf, XP_911724.4, Etv3, Etv2, Spi1,

Elf3, Spdef, Stat3
metacluster_1/pattern_9 # seqlets: 603 SequenceContrib ScoresHyp_Contrib Scores
Usf1, Usf2, Tfeb, Tfe3, Mitf, Arntl, Tfec, Srebf1, Clock, Arnt,

Mlx, Npas2, Bhlhe40, Creb3l2, Bhlhe41, Tcfl5, Mycn, Xbp1, Max, Arnt2, Mlxip,

Creb1, Atf1
metacluster_1/pattern_10 # seqlets: 363 SequenceContrib ScoresHyp_Contrib Scores
Rfx2, Rfx3, Rfx1, Rfx4, Rfx6, Rfx7
metacluster_1/pattern_11 # seqlets: 352 SequenceContrib ScoresHyp_Contrib Scores
Zic2, Zic3
metacluster_1/pattern_12 # seqlets: 291 SequenceContrib ScoresHyp_Contrib Scores
Esrrb, Esrra, Nr5a2, Esrrg, Rara, Rxrg, Rxra, Rarg, Nr5a1, Rarb,

Nr4a2, Nr2f1, Nr2f6, Rxrb, Nr2f2, Pparg, Nr2c2, Nr2c1, Ppara, Nr1h3, Rora,

Nr4a1
metacluster_1/pattern_13 # seqlets: 248 SequenceContrib ScoresHyp_Contrib Scores
Zfp143, Thap11, Tbx2
metacluster_1/pattern_14 # seqlets: 224 SequenceContrib ScoresHyp_Contrib Scores
Atf2, Jdp2, Atf7, Crem, Creb5, Atf3, Fosl2, Mxi1, Nfil3, Fosl1,

Jun, Hlf, Tef, Mbd2
metacluster_1/pattern_15 # seqlets: 186 SequenceContrib ScoresHyp_Contrib Scores
Yy1, Taf1, Zfp42
metacluster_1/pattern_16 # seqlets: 163 SequenceContrib ScoresHyp_Contrib Scores
Six2, Six4, Six1
metacluster_1/pattern_17 # seqlets: 146 SequenceContrib ScoresHyp_Contrib Scores
Bach2, Nfe2l2, Nfe2, Bach1, Jund, Fos, Fosb, Junb, Mafk, Batf,

Mafa, Mafb, Mafg, Maff, Maf
metacluster_1/pattern_18 # seqlets: 68 SequenceContrib ScoresHyp_Contrib Scores
Zbtb33
metacluster_1/pattern_19 # seqlets: 64 SequenceContrib ScoresHyp_Contrib Scores
Tcfcp2l1, Grhl2
metacluster_1/pattern_20 # seqlets: 61 SequenceContrib ScoresHyp_Contrib Scores
Rest
Click here for Motifs by TF-MoDISco: #182
TF NamePattern(s)
Ctcf
Pattern NameModiscoSignificance
metacluster_1/pattern_03.79101e-14
metacluster_1/pattern_140.0375443
Ctcfl
Pattern NameModiscoSignificance
metacluster_1/pattern_01.4697299999999998e-10
metacluster_1/pattern_140.00764979
Sp4
Pattern NameModiscoSignificance
metacluster_1/pattern_10.00107677
metacluster_1/pattern_20.00263321
Sp3
Pattern NameModiscoSignificance
metacluster_1/pattern_11.09599e-05
metacluster_1/pattern_22.04595e-07
metacluster_1/pattern_140.00038155199999999995
metacluster_1/pattern_154.29675e-05
Klf3
Pattern NameModiscoSignificance
metacluster_1/pattern_11.09599e-05
metacluster_1/pattern_22.04595e-07
metacluster_1/pattern_140.023844
metacluster_1/pattern_150.00684031
Sp2
Pattern NameModiscoSignificance
metacluster_1/pattern_12.8590999999999998e-05
metacluster_1/pattern_21.3342e-07
metacluster_1/pattern_141.63074e-05
metacluster_1/pattern_151.2774400000000001e-05
metacluster_1/pattern_180.0282311
Sp1
Pattern NameModiscoSignificance
metacluster_1/pattern_10.000258759
metacluster_1/pattern_20.000538823
metacluster_1/pattern_140.000906578
metacluster_1/pattern_153.20605e-05
Klf6
Pattern NameModiscoSignificance
metacluster_1/pattern_10.000172695
metacluster_1/pattern_20.00040335800000000004
metacluster_1/pattern_140.0375443
Klf4
Pattern NameModiscoSignificance
metacluster_1/pattern_10.00301745
metacluster_1/pattern_20.00040335800000000004
Klf7
Pattern NameModiscoSignificance
metacluster_1/pattern_10.00017364599999999998
metacluster_1/pattern_20.000538823
Klf8
Pattern NameModiscoSignificance
metacluster_1/pattern_10.000253496
metacluster_1/pattern_20.000811859
Klf1
Pattern NameModiscoSignificance
metacluster_1/pattern_10.00929522
metacluster_1/pattern_20.0364036
Klf12
Pattern NameModiscoSignificance
metacluster_1/pattern_10.00471194
metacluster_1/pattern_20.0363126
E2f4
Pattern NameModiscoSignificance
metacluster_1/pattern_10.000959882
metacluster_1/pattern_20.00040335800000000004
Zbtb17
Pattern NameModiscoSignificance
metacluster_1/pattern_10.00126105
metacluster_1/pattern_20.000896874
metacluster_1/pattern_140.0351309
metacluster_1/pattern_150.000519865
Egr1
Pattern NameModiscoSignificance
metacluster_1/pattern_10.030376999999999998
metacluster_1/pattern_20.026170599999999995
metacluster_1/pattern_150.043912099999999996
Zfp281
Pattern NameModiscoSignificance
metacluster_1/pattern_10.057115099999999995
metacluster_1/pattern_20.04943259999999999
Sp5
Pattern NameModiscoSignificance
metacluster_1/pattern_10.00319138
metacluster_1/pattern_20.00104158
metacluster_1/pattern_150.029811400000000002
Egr2
Pattern NameModiscoSignificance
metacluster_1/pattern_10.0383001
metacluster_1/pattern_20.0379474
metacluster_1/pattern_150.033241
Klf5
Pattern NameModiscoSignificance
metacluster_1/pattern_10.005184899999999999
metacluster_1/pattern_20.00031482099999999996
Sall4
Pattern NameModiscoSignificance
metacluster_1/pattern_10.0146666
metacluster_1/pattern_20.0181514
Zscan10
Pattern NameModiscoSignificance
metacluster_1/pattern_10.0194888
E2f1
Pattern NameModiscoSignificance
metacluster_1/pattern_10.0269281
metacluster_1/pattern_20.014781799999999998
Wt1
Pattern NameModiscoSignificance
metacluster_1/pattern_10.0288406
metacluster_1/pattern_20.00753138
metacluster_1/pattern_140.0274746
metacluster_1/pattern_150.00839419
Klf15
Pattern NameModiscoSignificance
metacluster_1/pattern_10.046934
metacluster_1/pattern_20.0387092
metacluster_1/pattern_150.0372385
Maz
Pattern NameModiscoSignificance
metacluster_1/pattern_10.0527896
metacluster_1/pattern_20.00938757
metacluster_1/pattern_150.0182008
Zfp740
Pattern NameModiscoSignificance
metacluster_1/pattern_10.054293499999999995
metacluster_1/pattern_20.0354926
Srebf2
Pattern NameModiscoSignificance
metacluster_1/pattern_20.0156792
metacluster_1/pattern_90.00537856
Egr3
Pattern NameModiscoSignificance
metacluster_1/pattern_20.056105499999999996
Zfx
Pattern NameModiscoSignificance
metacluster_1/pattern_20.056175499999999996
metacluster_1/pattern_140.002221
metacluster_1/pattern_150.0303185
metacluster_1/pattern_180.00246937
Myc
Pattern NameModiscoSignificance
metacluster_1/pattern_30.0347556
metacluster_1/pattern_90.0497908
Sox4
Pattern NameModiscoSignificance
metacluster_1/pattern_40.00316364
Sox3
Pattern NameModiscoSignificance
metacluster_1/pattern_40.0368573
Sox6
Pattern NameModiscoSignificance
metacluster_1/pattern_40.019808700000000002
Sox2
Pattern NameModiscoSignificance
metacluster_1/pattern_40.0174405
metacluster_1/pattern_55.6974e-06
metacluster_1/pattern_100.0545265
Nanog
Pattern NameModiscoSignificance
metacluster_1/pattern_40.00080541
metacluster_1/pattern_59.82193e-10
Sox17
Pattern NameModiscoSignificance
metacluster_1/pattern_40.0009710869999999999
Sox14
Pattern NameModiscoSignificance
metacluster_1/pattern_40.00234863
Sox12
Pattern NameModiscoSignificance
metacluster_1/pattern_40.00245019
Sox7
Pattern NameModiscoSignificance
metacluster_1/pattern_40.00355382
Sox5
Pattern NameModiscoSignificance
metacluster_1/pattern_40.00456128
Sox8
Pattern NameModiscoSignificance
metacluster_1/pattern_40.00456128
Lef1
Pattern NameModiscoSignificance
metacluster_1/pattern_40.0368573
metacluster_1/pattern_50.0327337
Sry
Pattern NameModiscoSignificance
metacluster_1/pattern_40.044213199999999994
Sox18
Pattern NameModiscoSignificance
metacluster_1/pattern_40.00607857
Sox11
Pattern NameModiscoSignificance
metacluster_1/pattern_40.007015
Sox9
Pattern NameModiscoSignificance
metacluster_1/pattern_40.0137596
Sox21
Pattern NameModiscoSignificance
metacluster_1/pattern_40.016590900000000002
Pou5f1
Pattern NameModiscoSignificance
metacluster_1/pattern_40.0174405
metacluster_1/pattern_56.31561e-06
Cux2
Pattern NameModiscoSignificance
metacluster_1/pattern_40.0169755
Tcf7
Pattern NameModiscoSignificance
metacluster_1/pattern_40.0451115
Sox15
Pattern NameModiscoSignificance
metacluster_1/pattern_40.023335400000000003
Sox10
Pattern NameModiscoSignificance
metacluster_1/pattern_40.0335006
Sox30
Pattern NameModiscoSignificance
metacluster_1/pattern_40.033571199999999995
Tcf7l2
Pattern NameModiscoSignificance
metacluster_1/pattern_40.0354574
Tcf7l1
Pattern NameModiscoSignificance
metacluster_1/pattern_40.044213199999999994
Pou2f2
Pattern NameModiscoSignificance
metacluster_1/pattern_50.0327337
Nfyb
Pattern NameModiscoSignificance
metacluster_1/pattern_64.66455e-14
Nfyc
Pattern NameModiscoSignificance
metacluster_1/pattern_61.8923200000000002e-10
Nfya
Pattern NameModiscoSignificance
metacluster_1/pattern_63.67899e-09
Foxi1
Pattern NameModiscoSignificance
metacluster_1/pattern_68.62842e-07
Pbx3
Pattern NameModiscoSignificance
metacluster_1/pattern_61.39726e-05
Nrf1
Pattern NameModiscoSignificance
metacluster_1/pattern_77.70068e-07
Elf1
Pattern NameModiscoSignificance
metacluster_1/pattern_84.41813e-09
Gabpa
Pattern NameModiscoSignificance
metacluster_1/pattern_80.00367008
Elk1
Pattern NameModiscoSignificance
metacluster_1/pattern_80.00367008
Fli1
Pattern NameModiscoSignificance
metacluster_1/pattern_80.00549129
Elk4
Pattern NameModiscoSignificance
metacluster_1/pattern_80.00501471
Elk3
Pattern NameModiscoSignificance
metacluster_1/pattern_80.00367008
Ets1
Pattern NameModiscoSignificance
metacluster_1/pattern_80.00629854
Erg
Pattern NameModiscoSignificance
metacluster_1/pattern_80.00549129
Fev
Pattern NameModiscoSignificance
metacluster_1/pattern_80.00314047
Etv5
Pattern NameModiscoSignificance
metacluster_1/pattern_80.00314047
Elf5
Pattern NameModiscoSignificance
metacluster_1/pattern_80.011329299999999999
Etv1
Pattern NameModiscoSignificance
metacluster_1/pattern_80.00409788
Etv4
Pattern NameModiscoSignificance
metacluster_1/pattern_80.00501471
Elf2
Pattern NameModiscoSignificance
metacluster_1/pattern_80.00796834
Elf4
Pattern NameModiscoSignificance
metacluster_1/pattern_80.00461209
Etv6
Pattern NameModiscoSignificance
metacluster_1/pattern_80.00479586
Ehf
Pattern NameModiscoSignificance
metacluster_1/pattern_80.00601804
XP_911724.4
Pattern NameModiscoSignificance
metacluster_1/pattern_80.00658992
Etv3
Pattern NameModiscoSignificance
metacluster_1/pattern_80.00689187
Etv2
Pattern NameModiscoSignificance
metacluster_1/pattern_80.0169342
Spi1
Pattern NameModiscoSignificance
metacluster_1/pattern_80.0169342
Elf3
Pattern NameModiscoSignificance
metacluster_1/pattern_80.0209435
Spdef
Pattern NameModiscoSignificance
metacluster_1/pattern_80.0314392
Stat3
Pattern NameModiscoSignificance
metacluster_1/pattern_80.05833390000000001
Usf1
Pattern NameModiscoSignificance
metacluster_1/pattern_90.00086678
metacluster_1/pattern_140.014369999999999999
Usf2
Pattern NameModiscoSignificance
metacluster_1/pattern_90.0011455
metacluster_1/pattern_145.07388e-05
metacluster_1/pattern_150.0184699
Tfeb
Pattern NameModiscoSignificance
metacluster_1/pattern_90.000886953
Tfe3
Pattern NameModiscoSignificance
metacluster_1/pattern_90.00086678
metacluster_1/pattern_140.049049800000000005
Mitf
Pattern NameModiscoSignificance
metacluster_1/pattern_90.0008278989999999999
Arntl
Pattern NameModiscoSignificance
metacluster_1/pattern_90.00513046
Tfec
Pattern NameModiscoSignificance
metacluster_1/pattern_90.000742955
Srebf1
Pattern NameModiscoSignificance
metacluster_1/pattern_90.00513046
Clock
Pattern NameModiscoSignificance
metacluster_1/pattern_90.025944599999999998
Arnt
Pattern NameModiscoSignificance
metacluster_1/pattern_90.0450711
Mlx
Pattern NameModiscoSignificance
metacluster_1/pattern_90.012850799999999997
Npas2
Pattern NameModiscoSignificance
metacluster_1/pattern_90.00144206
Bhlhe40
Pattern NameModiscoSignificance
metacluster_1/pattern_90.0165026
Creb3l2
Pattern NameModiscoSignificance
metacluster_1/pattern_90.019647
Bhlhe41
Pattern NameModiscoSignificance
metacluster_1/pattern_90.0217585
Tcfl5
Pattern NameModiscoSignificance
metacluster_1/pattern_90.025944599999999998
Mycn
Pattern NameModiscoSignificance
metacluster_1/pattern_90.046911400000000006
Xbp1
Pattern NameModiscoSignificance
metacluster_1/pattern_90.0331029
Max
Pattern NameModiscoSignificance
metacluster_1/pattern_90.0519649
Arnt2
Pattern NameModiscoSignificance
metacluster_1/pattern_90.0475505
Mlxip
Pattern NameModiscoSignificance
metacluster_1/pattern_90.0475505
Creb1
Pattern NameModiscoSignificance
metacluster_1/pattern_90.048288199999999996
metacluster_1/pattern_140.00201104
Atf1
Pattern NameModiscoSignificance
metacluster_1/pattern_90.0558616
metacluster_1/pattern_140.0366031
Rfx2
Pattern NameModiscoSignificance
metacluster_1/pattern_100.00296273
metacluster_1/pattern_150.0372385
Rfx3
Pattern NameModiscoSignificance
metacluster_1/pattern_100.0011572000000000002
metacluster_1/pattern_150.029811400000000002
Rfx1
Pattern NameModiscoSignificance
metacluster_1/pattern_101.10875e-06
metacluster_1/pattern_140.023844
metacluster_1/pattern_158.20614e-05
Rfx4
Pattern NameModiscoSignificance
metacluster_1/pattern_102.23903e-05
Rfx6
Pattern NameModiscoSignificance
metacluster_1/pattern_100.000128303
Rfx7
Pattern NameModiscoSignificance
metacluster_1/pattern_100.000544373
Zic2
Pattern NameModiscoSignificance
metacluster_1/pattern_114.9274099999999996e-05
Zic3
Pattern NameModiscoSignificance
metacluster_1/pattern_110.000576757
Esrrb
Pattern NameModiscoSignificance
metacluster_1/pattern_120.0004561
Esrra
Pattern NameModiscoSignificance
metacluster_1/pattern_120.000156777
Nr5a2
Pattern NameModiscoSignificance
metacluster_1/pattern_120.00193194
Esrrg
Pattern NameModiscoSignificance
metacluster_1/pattern_120.00027240099999999997
Rara
Pattern NameModiscoSignificance
metacluster_1/pattern_120.0281865
Rxrg
Pattern NameModiscoSignificance
metacluster_1/pattern_120.000426041
Rxra
Pattern NameModiscoSignificance
metacluster_1/pattern_120.0222415
Rarg
Pattern NameModiscoSignificance
metacluster_1/pattern_120.05899069999999999
Nr5a1
Pattern NameModiscoSignificance
metacluster_1/pattern_120.00505698
Rarb
Pattern NameModiscoSignificance
metacluster_1/pattern_120.0356278
Nr4a2
Pattern NameModiscoSignificance
metacluster_1/pattern_120.00849126
Nr2f1
Pattern NameModiscoSignificance
metacluster_1/pattern_120.05152230000000001
Nr2f6
Pattern NameModiscoSignificance
metacluster_1/pattern_120.0355361
Rxrb
Pattern NameModiscoSignificance
metacluster_1/pattern_120.0557304
Nr2f2
Pattern NameModiscoSignificance
metacluster_1/pattern_120.0358837
Pparg
Pattern NameModiscoSignificance
metacluster_1/pattern_120.0388606
Nr2c2
Pattern NameModiscoSignificance
metacluster_1/pattern_120.0234208
Nr2c1
Pattern NameModiscoSignificance
metacluster_1/pattern_120.0402121
Ppara
Pattern NameModiscoSignificance
metacluster_1/pattern_120.0303551
Nr1h3
Pattern NameModiscoSignificance
metacluster_1/pattern_120.034134899999999996
Rora
Pattern NameModiscoSignificance
metacluster_1/pattern_120.04524280000000001
Nr4a1
Pattern NameModiscoSignificance
metacluster_1/pattern_120.056084
Zfp143
Pattern NameModiscoSignificance
metacluster_1/pattern_133.00231e-19
Thap11
Pattern NameModiscoSignificance
metacluster_1/pattern_134.78014e-18
Tbx2
Pattern NameModiscoSignificance
metacluster_1/pattern_131.56624e-12
Atf2
Pattern NameModiscoSignificance
metacluster_1/pattern_140.000463894
Jdp2
Pattern NameModiscoSignificance
metacluster_1/pattern_140.000272231
metacluster_1/pattern_170.010367200000000002
Atf7
Pattern NameModiscoSignificance
metacluster_1/pattern_140.00015083799999999998
Crem
Pattern NameModiscoSignificance
metacluster_1/pattern_140.00292865
Creb5
Pattern NameModiscoSignificance
metacluster_1/pattern_140.00015083799999999998
Atf3
Pattern NameModiscoSignificance
metacluster_1/pattern_140.00132634
metacluster_1/pattern_170.000557603
Fosl2
Pattern NameModiscoSignificance
metacluster_1/pattern_140.00304183
metacluster_1/pattern_170.0008989930000000001
Mxi1
Pattern NameModiscoSignificance
metacluster_1/pattern_140.0139118
metacluster_1/pattern_150.0314563
Nfil3
Pattern NameModiscoSignificance
metacluster_1/pattern_140.0205791
Fosl1
Pattern NameModiscoSignificance
metacluster_1/pattern_140.0213304
metacluster_1/pattern_170.000316412
Jun
Pattern NameModiscoSignificance
metacluster_1/pattern_140.026044799999999996
metacluster_1/pattern_173.91256e-05
Hlf
Pattern NameModiscoSignificance
metacluster_1/pattern_140.0274746
Tef
Pattern NameModiscoSignificance
metacluster_1/pattern_140.0375443
Mbd2
Pattern NameModiscoSignificance
metacluster_1/pattern_140.0587519
Yy1
Pattern NameModiscoSignificance
metacluster_1/pattern_154.29675e-05
Taf1
Pattern NameModiscoSignificance
metacluster_1/pattern_156.86945e-05
Zfp42
Pattern NameModiscoSignificance
metacluster_1/pattern_150.029811400000000002
Six2
Pattern NameModiscoSignificance
metacluster_1/pattern_163.63346e-09
Six4
Pattern NameModiscoSignificance
metacluster_1/pattern_161.81503e-07
Six1
Pattern NameModiscoSignificance
metacluster_1/pattern_167.93029e-06
Bach2
Pattern NameModiscoSignificance
metacluster_1/pattern_172.54606e-06
Nfe2l2
Pattern NameModiscoSignificance
metacluster_1/pattern_172.2989299999999997e-05
Nfe2
Pattern NameModiscoSignificance
metacluster_1/pattern_172.2989299999999997e-05
Bach1
Pattern NameModiscoSignificance
metacluster_1/pattern_173.44612e-05
Jund
Pattern NameModiscoSignificance
metacluster_1/pattern_170.0542193
Fos
Pattern NameModiscoSignificance
metacluster_1/pattern_170.00044719199999999996
Fosb
Pattern NameModiscoSignificance
metacluster_1/pattern_170.00105337
Junb
Pattern NameModiscoSignificance
metacluster_1/pattern_170.00105337
Mafk
Pattern NameModiscoSignificance
metacluster_1/pattern_170.00232705
Batf
Pattern NameModiscoSignificance
metacluster_1/pattern_170.018040599999999997
Mafa
Pattern NameModiscoSignificance
metacluster_1/pattern_170.00401716
Mafb
Pattern NameModiscoSignificance
metacluster_1/pattern_170.0086351
Mafg
Pattern NameModiscoSignificance
metacluster_1/pattern_170.00655503
Maff
Pattern NameModiscoSignificance
metacluster_1/pattern_170.00792772
Maf
Pattern NameModiscoSignificance
metacluster_1/pattern_170.00792772
Zbtb33
Pattern NameModiscoSignificance
metacluster_1/pattern_180.000207131
Tcfcp2l1
Pattern NameModiscoSignificance
metacluster_1/pattern_190.000730828
Grhl2
Pattern NameModiscoSignificance
metacluster_1/pattern_190.000554512
Rest
Pattern NameModiscoSignificance
metacluster_1/pattern_207.641609999999999e-13
In [6]:
display_paiwise_pattern_comparison(data_name, modisco_root, homer_root)
Number of CISBP TFs obtained by TF-MoDISco and Homer
Shared TFs between TF-MoDISco and Homer: #51
TF NameModiscoHomer
Erg
Pattern NameModiscoSignificance
metacluster_1/pattern_80.00549129
Pattern NameHomerSignificance
motif8.motif0.0385611
Elf5
Pattern NameModiscoSignificance
metacluster_1/pattern_80.011329299999999999
Pattern NameHomerSignificance
motif8.motif0.0207928
Sp3
Pattern NameModiscoSignificance
metacluster_1/pattern_11.09599e-05
metacluster_1/pattern_22.04595e-07
metacluster_1/pattern_140.00038155199999999995
metacluster_1/pattern_154.29675e-05
Pattern NameHomerSignificance
motif2.motif0.00105639
Klf1
Pattern NameModiscoSignificance
metacluster_1/pattern_10.00929522
metacluster_1/pattern_20.0364036
Pattern NameHomerSignificance
motif2.motif0.059773
Zbtb33
Pattern NameModiscoSignificance
metacluster_1/pattern_180.000207131
Pattern NameHomerSignificance
motif13.motif0.00124735
Thap11
Pattern NameModiscoSignificance
metacluster_1/pattern_134.78014e-18
Pattern NameHomerSignificance
motif4.motif7.2794e-07
Pou5f1
Pattern NameModiscoSignificance
metacluster_1/pattern_40.0174405
metacluster_1/pattern_56.31561e-06
Pattern NameHomerSignificance
motif6.motif4.75117e-06
Sp1
Pattern NameModiscoSignificance
metacluster_1/pattern_10.000258759
metacluster_1/pattern_20.000538823
metacluster_1/pattern_140.000906578
metacluster_1/pattern_153.20605e-05
Pattern NameHomerSignificance
motif2.motif0.00897328
Ets1
Pattern NameModiscoSignificance
metacluster_1/pattern_80.00629854
Pattern NameHomerSignificance
motif8.motif0.044553699999999995
Nfyb
Pattern NameModiscoSignificance
metacluster_1/pattern_64.66455e-14
Pattern NameHomerSignificance
motif3.motif8.61248e-10
Elf4
Pattern NameModiscoSignificance
metacluster_1/pattern_80.00461209
Pattern NameHomerSignificance
motif8.motif0.029066200000000004
Foxi1
Pattern NameModiscoSignificance
metacluster_1/pattern_68.62842e-07
Pattern NameHomerSignificance
motif3.motif0.000410349
Atf1
Pattern NameModiscoSignificance
metacluster_1/pattern_90.0558616
metacluster_1/pattern_140.0366031
Pattern NameHomerSignificance
motif14.motif0.0407203
Fev
Pattern NameModiscoSignificance
metacluster_1/pattern_80.00314047
Pattern NameHomerSignificance
motif8.motif0.0207928
Pbx3
Pattern NameModiscoSignificance
metacluster_1/pattern_61.39726e-05
Pattern NameHomerSignificance
motif3.motif0.000142428
Elf2
Pattern NameModiscoSignificance
metacluster_1/pattern_80.00796834
Pattern NameHomerSignificance
motif8.motif0.0247355
Etv3
Pattern NameModiscoSignificance
metacluster_1/pattern_80.00689187
Pattern NameHomerSignificance
motif8.motif0.0455875
Zfx
Pattern NameModiscoSignificance
metacluster_1/pattern_20.056175499999999996
metacluster_1/pattern_140.002221
metacluster_1/pattern_150.0303185
metacluster_1/pattern_180.00246937
Pattern NameHomerSignificance
motif2.motif0.0209542
Etv4
Pattern NameModiscoSignificance
metacluster_1/pattern_80.00501471
Pattern NameHomerSignificance
motif8.motif0.0247355
Ctcf
Pattern NameModiscoSignificance
metacluster_1/pattern_03.79101e-14
metacluster_1/pattern_140.0375443
Pattern NameHomerSignificance
motif1.motif3.0211e-07
Klf12
Pattern NameModiscoSignificance
metacluster_1/pattern_10.00471194
metacluster_1/pattern_20.0363126
Pattern NameHomerSignificance
motif2.motif0.0327934
Etv6
Pattern NameModiscoSignificance
metacluster_1/pattern_80.00479586
Pattern NameHomerSignificance
motif8.motif0.0348661
Klf7
Pattern NameModiscoSignificance
metacluster_1/pattern_10.00017364599999999998
metacluster_1/pattern_20.000538823
Pattern NameHomerSignificance
motif2.motif0.00105572
Elk1
Pattern NameModiscoSignificance
metacluster_1/pattern_80.00367008
Pattern NameHomerSignificance
motif8.motif0.0207928
Sp4
Pattern NameModiscoSignificance
metacluster_1/pattern_10.00107677
metacluster_1/pattern_20.00263321
Pattern NameHomerSignificance
motif2.motif0.029766900000000002
Nfyc
Pattern NameModiscoSignificance
metacluster_1/pattern_61.8923200000000002e-10
Pattern NameHomerSignificance
motif3.motif1.0775200000000002e-06
Nanog
Pattern NameModiscoSignificance
metacluster_1/pattern_40.00080541
metacluster_1/pattern_59.82193e-10
Pattern NameHomerSignificance
motif6.motif4.4214799999999997e-07
Zfp143
Pattern NameModiscoSignificance
metacluster_1/pattern_133.00231e-19
Pattern NameHomerSignificance
motif4.motif7.2794e-07
Elk3
Pattern NameModiscoSignificance
metacluster_1/pattern_80.00367008
Pattern NameHomerSignificance
motif8.motif0.0237358
Klf6
Pattern NameModiscoSignificance
metacluster_1/pattern_10.000172695
metacluster_1/pattern_20.00040335800000000004
metacluster_1/pattern_140.0375443
Pattern NameHomerSignificance
motif2.motif0.00325847
Nrf1
Pattern NameModiscoSignificance
metacluster_1/pattern_77.70068e-07
Pattern NameHomerSignificance
motif10.motif3.31922e-05
Tbx2
Pattern NameModiscoSignificance
metacluster_1/pattern_131.56624e-12
Pattern NameHomerSignificance
motif4.motif1.85525e-05
XP_911724.4
Pattern NameModiscoSignificance
metacluster_1/pattern_80.00658992
Pattern NameHomerSignificance
motif8.motif0.044553699999999995
Sp2
Pattern NameModiscoSignificance
metacluster_1/pattern_12.8590999999999998e-05
metacluster_1/pattern_21.3342e-07
metacluster_1/pattern_141.63074e-05
metacluster_1/pattern_151.2774400000000001e-05
metacluster_1/pattern_180.0282311
Pattern NameHomerSignificance
motif2.motif0.00105572
Klf5
Pattern NameModiscoSignificance
metacluster_1/pattern_10.005184899999999999
metacluster_1/pattern_20.00031482099999999996
Pattern NameHomerSignificance
motif2.motif0.0385051
Fli1
Pattern NameModiscoSignificance
metacluster_1/pattern_80.00549129
Pattern NameHomerSignificance
motif8.motif0.0385611
Ctcfl
Pattern NameModiscoSignificance
metacluster_1/pattern_01.4697299999999998e-10
metacluster_1/pattern_140.00764979
Pattern NameHomerSignificance
motif1.motif5.8518e-07
Klf3
Pattern NameModiscoSignificance
metacluster_1/pattern_11.09599e-05
metacluster_1/pattern_22.04595e-07
metacluster_1/pattern_140.023844
metacluster_1/pattern_150.00684031
Pattern NameHomerSignificance
motif2.motif0.00105572
Klf4
Pattern NameModiscoSignificance
metacluster_1/pattern_10.00301745
metacluster_1/pattern_20.00040335800000000004
Pattern NameHomerSignificance
motif2.motif0.00105639
Etv5
Pattern NameModiscoSignificance
metacluster_1/pattern_80.00314047
Pattern NameHomerSignificance
motif8.motif0.0164336
Ehf
Pattern NameModiscoSignificance
metacluster_1/pattern_80.00601804
Pattern NameHomerSignificance
motif8.motif0.044553699999999995
Klf8
Pattern NameModiscoSignificance
metacluster_1/pattern_10.000253496
metacluster_1/pattern_20.000811859
Pattern NameHomerSignificance
motif2.motif0.00105639
Sox2
Pattern NameModiscoSignificance
metacluster_1/pattern_40.0174405
metacluster_1/pattern_55.6974e-06
metacluster_1/pattern_100.0545265
Pattern NameHomerSignificance
motif6.motif2.0149900000000003e-06
Egr1
Pattern NameModiscoSignificance
metacluster_1/pattern_10.030376999999999998
metacluster_1/pattern_20.026170599999999995
metacluster_1/pattern_150.043912099999999996
Pattern NameHomerSignificance
motif2.motif0.029766900000000002
Pou2f2
Pattern NameModiscoSignificance
metacluster_1/pattern_50.0327337
Pattern NameHomerSignificance
motif6.motif0.0520876
E2f4
Pattern NameModiscoSignificance
metacluster_1/pattern_10.000959882
metacluster_1/pattern_20.00040335800000000004
Pattern NameHomerSignificance
motif2.motif0.00105639
Gabpa
Pattern NameModiscoSignificance
metacluster_1/pattern_80.00367008
Pattern NameHomerSignificance
motif8.motif0.0237358
Nfya
Pattern NameModiscoSignificance
metacluster_1/pattern_63.67899e-09
Pattern NameHomerSignificance
motif3.motif5.78649e-07
Etv1
Pattern NameModiscoSignificance
metacluster_1/pattern_80.00409788
Pattern NameHomerSignificance
motif8.motif0.026804900000000003
Elk4
Pattern NameModiscoSignificance
metacluster_1/pattern_80.00501471
Pattern NameHomerSignificance
motif8.motif0.0341425
Elf1
Pattern NameModiscoSignificance
metacluster_1/pattern_84.41813e-09
Pattern NameHomerSignificance
motif8.motif0.00948722
Unique TF-MoDISco TFs: #131
TF NameModiscoHomer
Batf
Pattern NameModiscoSignificance
metacluster_1/pattern_170.018040599999999997
Absent
Atf7
Pattern NameModiscoSignificance
metacluster_1/pattern_140.00015083799999999998
Absent
Elf3
Pattern NameModiscoSignificance
metacluster_1/pattern_80.0209435
Absent
Nr2f1
Pattern NameModiscoSignificance
metacluster_1/pattern_120.05152230000000001
Absent
Rarb
Pattern NameModiscoSignificance
metacluster_1/pattern_120.0356278
Absent
Fos
Pattern NameModiscoSignificance
metacluster_1/pattern_170.00044719199999999996
Absent
Pparg
Pattern NameModiscoSignificance
metacluster_1/pattern_120.0388606
Absent
Stat3
Pattern NameModiscoSignificance
metacluster_1/pattern_80.05833390000000001
Absent
Rfx6
Pattern NameModiscoSignificance
metacluster_1/pattern_100.000128303
Absent
Rfx7
Pattern NameModiscoSignificance
metacluster_1/pattern_100.000544373
Absent
Mafg
Pattern NameModiscoSignificance
metacluster_1/pattern_170.00655503
Absent
Tcf7l2
Pattern NameModiscoSignificance
metacluster_1/pattern_40.0354574
Absent
Zfp42
Pattern NameModiscoSignificance
metacluster_1/pattern_150.029811400000000002
Absent
Nr2c2
Pattern NameModiscoSignificance
metacluster_1/pattern_120.0234208
Absent
Tfe3
Pattern NameModiscoSignificance
metacluster_1/pattern_90.00086678
metacluster_1/pattern_140.049049800000000005
Absent
Arntl
Pattern NameModiscoSignificance
metacluster_1/pattern_90.00513046
Absent
Six1
Pattern NameModiscoSignificance
metacluster_1/pattern_167.93029e-06
Absent
Mbd2
Pattern NameModiscoSignificance
metacluster_1/pattern_140.0587519
Absent
Sox17
Pattern NameModiscoSignificance
metacluster_1/pattern_40.0009710869999999999
Absent
Esrrb
Pattern NameModiscoSignificance
metacluster_1/pattern_120.0004561
Absent
Rfx4
Pattern NameModiscoSignificance
metacluster_1/pattern_102.23903e-05
Absent
Sall4
Pattern NameModiscoSignificance
metacluster_1/pattern_10.0146666
metacluster_1/pattern_20.0181514
Absent
Sox5
Pattern NameModiscoSignificance
metacluster_1/pattern_40.00456128
Absent
Esrrg
Pattern NameModiscoSignificance
metacluster_1/pattern_120.00027240099999999997
Absent
Esrra
Pattern NameModiscoSignificance
metacluster_1/pattern_120.000156777
Absent
Nr4a2
Pattern NameModiscoSignificance
metacluster_1/pattern_120.00849126
Absent
Cux2
Pattern NameModiscoSignificance
metacluster_1/pattern_40.0169755
Absent
Tef
Pattern NameModiscoSignificance
metacluster_1/pattern_140.0375443
Absent
Mafb
Pattern NameModiscoSignificance
metacluster_1/pattern_170.0086351
Absent
Sp5
Pattern NameModiscoSignificance
metacluster_1/pattern_10.00319138
metacluster_1/pattern_20.00104158
metacluster_1/pattern_150.029811400000000002
Absent
E2f1
Pattern NameModiscoSignificance
metacluster_1/pattern_10.0269281
metacluster_1/pattern_20.014781799999999998
Absent
Six2
Pattern NameModiscoSignificance
metacluster_1/pattern_163.63346e-09
Absent
Bach2
Pattern NameModiscoSignificance
metacluster_1/pattern_172.54606e-06
Absent
Bhlhe41
Pattern NameModiscoSignificance
metacluster_1/pattern_90.0217585
Absent
Nfe2l2
Pattern NameModiscoSignificance
metacluster_1/pattern_172.2989299999999997e-05
Absent
Klf15
Pattern NameModiscoSignificance
metacluster_1/pattern_10.046934
metacluster_1/pattern_20.0387092
metacluster_1/pattern_150.0372385
Absent
Nr1h3
Pattern NameModiscoSignificance
metacluster_1/pattern_120.034134899999999996
Absent
Creb5
Pattern NameModiscoSignificance
metacluster_1/pattern_140.00015083799999999998
Absent
Tfeb
Pattern NameModiscoSignificance
metacluster_1/pattern_90.000886953
Absent
Max
Pattern NameModiscoSignificance
metacluster_1/pattern_90.0519649
Absent
Fosl1
Pattern NameModiscoSignificance
metacluster_1/pattern_140.0213304
metacluster_1/pattern_170.000316412
Absent
Rest
Pattern NameModiscoSignificance
metacluster_1/pattern_207.641609999999999e-13
Absent
Xbp1
Pattern NameModiscoSignificance
metacluster_1/pattern_90.0331029
Absent
Rxra
Pattern NameModiscoSignificance
metacluster_1/pattern_120.0222415
Absent
Jdp2
Pattern NameModiscoSignificance
metacluster_1/pattern_140.000272231
metacluster_1/pattern_170.010367200000000002
Absent
Spi1
Pattern NameModiscoSignificance
metacluster_1/pattern_80.0169342
Absent
Bhlhe40
Pattern NameModiscoSignificance
metacluster_1/pattern_90.0165026
Absent
Zic2
Pattern NameModiscoSignificance
metacluster_1/pattern_114.9274099999999996e-05
Absent
Nr4a1
Pattern NameModiscoSignificance
metacluster_1/pattern_120.056084
Absent
Creb3l2
Pattern NameModiscoSignificance
metacluster_1/pattern_90.019647
Absent
Fosl2
Pattern NameModiscoSignificance
metacluster_1/pattern_140.00304183
metacluster_1/pattern_170.0008989930000000001
Absent
Sox14
Pattern NameModiscoSignificance
metacluster_1/pattern_40.00234863
Absent
Rfx3
Pattern NameModiscoSignificance
metacluster_1/pattern_100.0011572000000000002
metacluster_1/pattern_150.029811400000000002
Absent
Tcfl5
Pattern NameModiscoSignificance
metacluster_1/pattern_90.025944599999999998
Absent
Rarg
Pattern NameModiscoSignificance
metacluster_1/pattern_120.05899069999999999
Absent
Zfp281
Pattern NameModiscoSignificance
metacluster_1/pattern_10.057115099999999995
metacluster_1/pattern_20.04943259999999999
Absent
Maf
Pattern NameModiscoSignificance
metacluster_1/pattern_170.00792772
Absent
Rxrb
Pattern NameModiscoSignificance
metacluster_1/pattern_120.0557304
Absent
Mafk
Pattern NameModiscoSignificance
metacluster_1/pattern_170.00232705
Absent
Sry
Pattern NameModiscoSignificance
metacluster_1/pattern_40.044213199999999994
Absent
Rora
Pattern NameModiscoSignificance
metacluster_1/pattern_120.04524280000000001
Absent
Usf2
Pattern NameModiscoSignificance
metacluster_1/pattern_90.0011455
metacluster_1/pattern_145.07388e-05
metacluster_1/pattern_150.0184699
Absent
Yy1
Pattern NameModiscoSignificance
metacluster_1/pattern_154.29675e-05
Absent
Clock
Pattern NameModiscoSignificance
metacluster_1/pattern_90.025944599999999998
Absent
Six4
Pattern NameModiscoSignificance
metacluster_1/pattern_161.81503e-07
Absent
Sox12
Pattern NameModiscoSignificance
metacluster_1/pattern_40.00245019
Absent
Nr5a1
Pattern NameModiscoSignificance
metacluster_1/pattern_120.00505698
Absent
Nfil3
Pattern NameModiscoSignificance
metacluster_1/pattern_140.0205791
Absent
Mycn
Pattern NameModiscoSignificance
metacluster_1/pattern_90.046911400000000006
Absent
Nfe2
Pattern NameModiscoSignificance
metacluster_1/pattern_172.2989299999999997e-05
Absent
Maff
Pattern NameModiscoSignificance
metacluster_1/pattern_170.00792772
Absent
Spdef
Pattern NameModiscoSignificance
metacluster_1/pattern_80.0314392
Absent
Atf3
Pattern NameModiscoSignificance
metacluster_1/pattern_140.00132634
metacluster_1/pattern_170.000557603
Absent
Nr2f6
Pattern NameModiscoSignificance
metacluster_1/pattern_120.0355361
Absent
Nr2c1
Pattern NameModiscoSignificance
metacluster_1/pattern_120.0402121
Absent
Mlx
Pattern NameModiscoSignificance
metacluster_1/pattern_90.012850799999999997
Absent
Taf1
Pattern NameModiscoSignificance
metacluster_1/pattern_156.86945e-05
Absent
Tcf7
Pattern NameModiscoSignificance
metacluster_1/pattern_40.0451115
Absent
Jun
Pattern NameModiscoSignificance
metacluster_1/pattern_140.026044799999999996
metacluster_1/pattern_173.91256e-05
Absent
Rfx1
Pattern NameModiscoSignificance
metacluster_1/pattern_101.10875e-06
metacluster_1/pattern_140.023844
metacluster_1/pattern_158.20614e-05
Absent
Sox4
Pattern NameModiscoSignificance
metacluster_1/pattern_40.00316364
Absent
Jund
Pattern NameModiscoSignificance
metacluster_1/pattern_170.0542193
Absent
Tfec
Pattern NameModiscoSignificance
metacluster_1/pattern_90.000742955
Absent
Srebf1
Pattern NameModiscoSignificance
metacluster_1/pattern_90.00513046
Absent
Usf1
Pattern NameModiscoSignificance
metacluster_1/pattern_90.00086678
metacluster_1/pattern_140.014369999999999999
Absent
Srebf2
Pattern NameModiscoSignificance
metacluster_1/pattern_20.0156792
metacluster_1/pattern_90.00537856
Absent
Wt1
Pattern NameModiscoSignificance
metacluster_1/pattern_10.0288406
metacluster_1/pattern_20.00753138
metacluster_1/pattern_140.0274746
metacluster_1/pattern_150.00839419
Absent
Arnt2
Pattern NameModiscoSignificance
metacluster_1/pattern_90.0475505
Absent
Rfx2
Pattern NameModiscoSignificance
metacluster_1/pattern_100.00296273
metacluster_1/pattern_150.0372385
Absent
Fosb
Pattern NameModiscoSignificance
metacluster_1/pattern_170.00105337
Absent
Hlf
Pattern NameModiscoSignificance
metacluster_1/pattern_140.0274746
Absent
Mlxip
Pattern NameModiscoSignificance
metacluster_1/pattern_90.0475505
Absent
Sox6
Pattern NameModiscoSignificance
metacluster_1/pattern_40.019808700000000002
Absent
Sox10
Pattern NameModiscoSignificance
metacluster_1/pattern_40.0335006
Absent
Zfp740
Pattern NameModiscoSignificance
metacluster_1/pattern_10.054293499999999995
metacluster_1/pattern_20.0354926
Absent
Npas2
Pattern NameModiscoSignificance
metacluster_1/pattern_90.00144206
Absent
Grhl2
Pattern NameModiscoSignificance
metacluster_1/pattern_190.000554512
Absent
Sox7
Pattern NameModiscoSignificance
metacluster_1/pattern_40.00355382
Absent
Sox30
Pattern NameModiscoSignificance
metacluster_1/pattern_40.033571199999999995
Absent
Sox3
Pattern NameModiscoSignificance
metacluster_1/pattern_40.0368573
Absent
Rara
Pattern NameModiscoSignificance
metacluster_1/pattern_120.0281865
Absent
Crem
Pattern NameModiscoSignificance
metacluster_1/pattern_140.00292865
Absent
Zbtb17
Pattern NameModiscoSignificance
metacluster_1/pattern_10.00126105
metacluster_1/pattern_20.000896874
metacluster_1/pattern_140.0351309
metacluster_1/pattern_150.000519865
Absent
Sox15
Pattern NameModiscoSignificance
metacluster_1/pattern_40.023335400000000003
Absent
Mafa
Pattern NameModiscoSignificance
metacluster_1/pattern_170.00401716
Absent
Mitf
Pattern NameModiscoSignificance
metacluster_1/pattern_90.0008278989999999999
Absent
Nr2f2
Pattern NameModiscoSignificance
metacluster_1/pattern_120.0358837
Absent
Mxi1
Pattern NameModiscoSignificance
metacluster_1/pattern_140.0139118
metacluster_1/pattern_150.0314563
Absent
Creb1
Pattern NameModiscoSignificance
metacluster_1/pattern_90.048288199999999996
metacluster_1/pattern_140.00201104
Absent
Junb
Pattern NameModiscoSignificance
metacluster_1/pattern_170.00105337
Absent
Etv2
Pattern NameModiscoSignificance
metacluster_1/pattern_80.0169342
Absent
Maz
Pattern NameModiscoSignificance
metacluster_1/pattern_10.0527896
metacluster_1/pattern_20.00938757
metacluster_1/pattern_150.0182008
Absent
Bach1
Pattern NameModiscoSignificance
metacluster_1/pattern_173.44612e-05
Absent
Arnt
Pattern NameModiscoSignificance
metacluster_1/pattern_90.0450711
Absent
Sox21
Pattern NameModiscoSignificance
metacluster_1/pattern_40.016590900000000002
Absent
Nr5a2
Pattern NameModiscoSignificance
metacluster_1/pattern_120.00193194
Absent
Zic3
Pattern NameModiscoSignificance
metacluster_1/pattern_110.000576757
Absent
Sox9
Pattern NameModiscoSignificance
metacluster_1/pattern_40.0137596
Absent
Egr3
Pattern NameModiscoSignificance
metacluster_1/pattern_20.056105499999999996
Absent
Lef1
Pattern NameModiscoSignificance
metacluster_1/pattern_40.0368573
metacluster_1/pattern_50.0327337
Absent
Tcf7l1
Pattern NameModiscoSignificance
metacluster_1/pattern_40.044213199999999994
Absent
Zscan10
Pattern NameModiscoSignificance
metacluster_1/pattern_10.0194888
Absent
Sox8
Pattern NameModiscoSignificance
metacluster_1/pattern_40.00456128
Absent
Tcfcp2l1
Pattern NameModiscoSignificance
metacluster_1/pattern_190.000730828
Absent
Sox18
Pattern NameModiscoSignificance
metacluster_1/pattern_40.00607857
Absent
Rxrg
Pattern NameModiscoSignificance
metacluster_1/pattern_120.000426041
Absent
Egr2
Pattern NameModiscoSignificance
metacluster_1/pattern_10.0383001
metacluster_1/pattern_20.0379474
metacluster_1/pattern_150.033241
Absent
Atf2
Pattern NameModiscoSignificance
metacluster_1/pattern_140.000463894
Absent
Sox11
Pattern NameModiscoSignificance
metacluster_1/pattern_40.007015
Absent
Ppara
Pattern NameModiscoSignificance
metacluster_1/pattern_120.0303551
Absent
Myc
Pattern NameModiscoSignificance
metacluster_1/pattern_30.0347556
metacluster_1/pattern_90.0497908
Absent
Unique Homer TFs: #0
TF NameModiscoHomer