# Parameters
data_name = "ES;C57BL_6J;R1;D;En"
modisco_root = "/srv/scratch/msharmin/mouse_hem/with_tfd/full_mouse50/Naive_modisco2019"
tomtom_report_root = "http://mitra.stanford.edu/kundaje/msharmin/report/tomtom_outs/cells"
task_dir = "task_218-naivegw"
perf_file = "/srv/scratch/msharmin/mouse_hem/with_tfd/full_mouse50/fineFactorized/task_218-naivegw/NaiveauPRC.txt"
homer_root = "/srv/scratch/msharmin/mouse_hem/with_tfd/full_mouse50/Naive_scans"
reportfile = "/mnt/lab_data/kundaje/msharmin/annotations/filtering samples_MS2.xlsx"
sheetname = "filter23"

from matlas.reports import display_metadata

load data from labcluster

Using TensorFlow backend.
2019-08-30 19:29:47,860 [WARNING] git-lfs not installed

display_metadata(data_name, perf_file, reportfile, sheetname)

Sample Information

MetaData Name	Description
Cell type	Mus musculus strain C57BL/6J R1 stem cell
Cell Group	ES cells and embryonic tissues
Experiment Name	DHS
Experiment Group	ENCODE

Pipeline Output

replicate	Naïve overlap peaks	IDR peaks	TSS enrichment (< 8 is very poor <10 is low)	Final number of unique mapping, dup-filtered, chrM filtered reads	Number of reads in called peak regions	Fraction of reads in called peak regions	Number of reads in promoter regions	Fraction of reads in promoter regions	Number of reads in enhancer regions	Fraction of reads in enhancer regions
rep1	264205	203234	7.0633	166825551	NA	NA	NA	NA	NA	NA

Modelling Metadata

Metric	Value
auPRC	0.5748
Calibrated Recall at 50% FDR	0.258
Number of Positive Examples in Test Data	117315
Number of Negative Examples in Test Data	7953536
Imbalance Ratio in Test Data	0.0145
Test Chromosomes	chr2, chr3, chr19

from matlas.reports import display_paiwise_pattern_comparison
from matlas.reports import display_denovo_patterns

display_denovo_patterns(data_name, modisco_root=modisco_root)

TF-MoDISco is using the TensorFlow backend.

The following two links show list of Denovo Patterns and corresponding Motifs discovered by TF-MoDISco

Click here for Denovo Patterns by TF-MoDISco: #29

Pattern Name	TF Name(s)	Modisco
metacluster_1/pattern_0 # seqlets: 4194 SequenceContrib ScoresHyp_Contrib Scores	Sp2, Klf5, Klf15, Sp3, Wt1, Klf4, Zfp281, Maz, Sp5, Klf1, Sp1, Sp4, Klf6, Klf7, Zbtb17, Zfx, Egr1, Klf3, Sall4, Klf8, Klf12, E2f4, Egr2, Zfp740, Srebf2, Tfap2c, Rela, E2f6, Gata1
metacluster_1/pattern_1 # seqlets: 3258 SequenceContrib ScoresHyp_Contrib Scores	Ctcf, Ctcfl
metacluster_1/pattern_2 # seqlets: 2300 SequenceContrib ScoresHyp_Contrib Scores	Nfyb, Nfya, Nfyc, Foxi1, Pbx3
metacluster_1/pattern_3 # seqlets: 1938 SequenceContrib ScoresHyp_Contrib Scores	Pou5f1, Nanog, Sox2, Pou2f2, Lef1, Sox30, Sox14
metacluster_1/pattern_4 # seqlets: 1554 SequenceContrib ScoresHyp_Contrib Scores	Nrf1
metacluster_1/pattern_5 # seqlets: 1551 SequenceContrib ScoresHyp_Contrib Scores
metacluster_1/pattern_6 # seqlets: 1426 SequenceContrib ScoresHyp_Contrib Scores	Gabpa, Elf1, Elk1, Fli1, Elk4, Elk3, Erg, Ets1, Elf5, Etv5, Fev, Etv1, Etv4, Elf2, Elf4, Etv6, Ehf, XP_911724.4, Etv3, Etv2, Elf3, Spi1, Spdef, Stat3
metacluster_1/pattern_7 # seqlets: 1240 SequenceContrib ScoresHyp_Contrib Scores	E2f1, Ptf1a, Zscan10
metacluster_1/pattern_8 # seqlets: 993 SequenceContrib ScoresHyp_Contrib Scores	Rfx2, Rfx3, Rfx1, Rfx4, Rfx6, Rfx7
metacluster_1/pattern_9 # seqlets: 962 SequenceContrib ScoresHyp_Contrib Scores	Tead4, Tead2, Tead1
metacluster_1/pattern_10 # seqlets: 682 SequenceContrib ScoresHyp_Contrib Scores	Yy1, Taf1, Zfp42
metacluster_1/pattern_11 # seqlets: 601 SequenceContrib ScoresHyp_Contrib Scores	Usf1, Usf2, Tfec, Tfeb, Tfe3, Mitf, Srebf1, Arntl, Clock, Bhlhe40, Mlx, Arnt, Npas2, Creb3l2, Tcfl5, Mycn, Max, Xbp1, Atf1, Bhlhe41, Myc, Mlxip, Hlf, Dbp
metacluster_1/pattern_12 # seqlets: 524 SequenceContrib ScoresHyp_Contrib Scores	Sry, Sox17
metacluster_1/pattern_13 # seqlets: 468 SequenceContrib ScoresHyp_Contrib Scores	Esrrb, Nr5a2, Rarg, Esrra, Esrrg, Rara, Nr5a1, Rxrg, Rxra, Hnf4a, Hnf4g, Nr2c2, Rxrb, Nr2f6, Nr4a2
metacluster_1/pattern_14 # seqlets: 454 SequenceContrib ScoresHyp_Contrib Scores	Zfp143, Thap11, Tbx2
metacluster_1/pattern_15 # seqlets: 434 SequenceContrib ScoresHyp_Contrib Scores
metacluster_1/pattern_16 # seqlets: 288 SequenceContrib ScoresHyp_Contrib Scores	Zic2, Zic3
metacluster_1/pattern_17 # seqlets: 263 SequenceContrib ScoresHyp_Contrib Scores	Bach2, Nfe2, Nfe2l2, Bach1, Mafk, Mafa, Jun, Mafg, Mafb, Maff, Atf3, Fosl2, Fosb, Junb, Maf, Fosl1, Jund, Batf, Fos, Jdp2
metacluster_1/pattern_18 # seqlets: 247 SequenceContrib ScoresHyp_Contrib Scores	Creb1, Atf2, Atf7, Crem, Creb5, Nfil3, Nr1h4, Tef
metacluster_1/pattern_19 # seqlets: 238 SequenceContrib ScoresHyp_Contrib Scores	Vsx2, Mnx1, Lhx2, Lhx9, Nobox, Prrx2, Lhx3, Msx3, Esx1, Hand1, Rhox6, Msx2, Arx, Pax6, Lbx2, Alx1, Gbx2, Pou1f1, Prrx1, Lhx1, Shox2, Alx4, Hoxa3, En1, Lhx5, Otp, Gbx1, Lhx4, Alx3, Emx2, Hmx2, Uncx, Nkx1-1, Hoxd3, Lhx6, En2, Evx1, Barhl2, Pou3f4, Prop1, Gsx2, Lhx8, Sebox, Hoxd1
metacluster_1/pattern_20 # seqlets: 158 SequenceContrib ScoresHyp_Contrib Scores
metacluster_1/pattern_21 # seqlets: 98 SequenceContrib ScoresHyp_Contrib Scores	Tcfcp2l1, Grhl2
metacluster_1/pattern_22 # seqlets: 85 SequenceContrib ScoresHyp_Contrib Scores	Six2, Six1, Six4
metacluster_1/pattern_23 # seqlets: 70 SequenceContrib ScoresHyp_Contrib Scores	Rest
metacluster_1/pattern_24 # seqlets: 56 SequenceContrib ScoresHyp_Contrib Scores
metacluster_1/pattern_25 # seqlets: 43 SequenceContrib ScoresHyp_Contrib Scores
metacluster_1/pattern_26 # seqlets: 41 SequenceContrib ScoresHyp_Contrib Scores
metacluster_1/pattern_27 # seqlets: 40 SequenceContrib ScoresHyp_Contrib Scores
metacluster_1/pattern_28 # seqlets: 39 SequenceContrib ScoresHyp_Contrib Scores	Nfia, Nfib

Click here for Motifs by TF-MoDISco: #209

TF Name	Pattern(s)
Sp2	Pattern Name Modisco Significance metacluster_1/pattern_0 0.000119161 metacluster_1/pattern_7 0.00303662 metacluster_1/pattern_18 0.012820400000000001
Klf5	Pattern Name Modisco Significance metacluster_1/pattern_0 0.000119161 metacluster_1/pattern_7 0.0247419
Klf15	Pattern Name Modisco Significance metacluster_1/pattern_0 0.000119161 metacluster_1/pattern_7 0.010275
Sp3	Pattern Name Modisco Significance metacluster_1/pattern_0 0.000119161 metacluster_1/pattern_7 0.00137251
Wt1	Pattern Name Modisco Significance metacluster_1/pattern_0 0.000119161 metacluster_1/pattern_7 0.00260512
Klf4	Pattern Name Modisco Significance metacluster_1/pattern_0 0.0018854 metacluster_1/pattern_7 0.0410677
Zfp281	Pattern Name Modisco Significance metacluster_1/pattern_0 0.0122846 metacluster_1/pattern_7 0.042896699999999996
Maz	Pattern Name Modisco Significance metacluster_1/pattern_0 0.000141939 metacluster_1/pattern_7 0.00239052
Sp5	Pattern Name Modisco Significance metacluster_1/pattern_0 0.000193053 metacluster_1/pattern_7 0.00239052
Klf1	Pattern Name Modisco Significance metacluster_1/pattern_0 0.036925400000000004 metacluster_1/pattern_7 0.056311900000000005
Sp1	Pattern Name Modisco Significance metacluster_1/pattern_0 0.000283626 metacluster_1/pattern_7 0.022603400000000003 metacluster_1/pattern_18 0.0484171
Sp4	Pattern Name Modisco Significance metacluster_1/pattern_0 0.00323953 metacluster_1/pattern_7 0.0357486
Klf6	Pattern Name Modisco Significance metacluster_1/pattern_0 0.000262755 metacluster_1/pattern_7 0.0118474
Klf7	Pattern Name Modisco Significance metacluster_1/pattern_0 0.00132928 metacluster_1/pattern_7 0.026291200000000004
Zbtb17	Pattern Name Modisco Significance metacluster_1/pattern_0 0.00132928 metacluster_1/pattern_7 0.00024109900000000002
Zfx	Pattern Name Modisco Significance metacluster_1/pattern_0 0.0178071 metacluster_1/pattern_18 0.050772000000000005
Egr1	Pattern Name Modisco Significance metacluster_1/pattern_0 0.023202200000000003 metacluster_1/pattern_7 0.026915300000000003
Klf3	Pattern Name Modisco Significance metacluster_1/pattern_0 0.00165683 metacluster_1/pattern_7 0.00980815
Sall4	Pattern Name Modisco Significance metacluster_1/pattern_0 0.00183521 metacluster_1/pattern_7 0.0224272
Klf8	Pattern Name Modisco Significance metacluster_1/pattern_0 0.00187363 metacluster_1/pattern_7 0.027579900000000004
Klf12	Pattern Name Modisco Significance metacluster_1/pattern_0 0.0018854 metacluster_1/pattern_7 0.0410677
E2f4	Pattern Name Modisco Significance metacluster_1/pattern_0 0.00234167 metacluster_1/pattern_7 0.0118474
Egr2	Pattern Name Modisco Significance metacluster_1/pattern_0 0.00360883 metacluster_1/pattern_7 0.0224272
Zfp740	Pattern Name Modisco Significance metacluster_1/pattern_0 0.0381004 metacluster_1/pattern_7 0.031604900000000005
Srebf2	Pattern Name Modisco Significance metacluster_1/pattern_0 0.0168623 metacluster_1/pattern_11 0.00861168
Tfap2c	Pattern Name Modisco Significance metacluster_1/pattern_0 0.0200751
Rela	Pattern Name Modisco Significance metacluster_1/pattern_0 0.0230102
E2f6	Pattern Name Modisco Significance metacluster_1/pattern_0 0.0230102
Gata1	Pattern Name Modisco Significance metacluster_1/pattern_0 0.0533707
Ctcf	Pattern Name Modisco Significance metacluster_1/pattern_1 1.02677e-09 metacluster_1/pattern_15 0.00844935
Ctcfl	Pattern Name Modisco Significance metacluster_1/pattern_1 9.34946e-10
Nfyb	Pattern Name Modisco Significance metacluster_1/pattern_2 5.45368e-10
Nfya	Pattern Name Modisco Significance metacluster_1/pattern_2 4.103e-08
Nfyc	Pattern Name Modisco Significance metacluster_1/pattern_2 3.1064800000000004e-07
Foxi1	Pattern Name Modisco Significance metacluster_1/pattern_2 1.94369e-05
Pbx3	Pattern Name Modisco Significance metacluster_1/pattern_2 0.00153709
Pou5f1	Pattern Name Modisco Significance metacluster_1/pattern_3 5.01682e-06 metacluster_1/pattern_19 0.033016199999999996
Nanog	Pattern Name Modisco Significance metacluster_1/pattern_3 2.87339e-09 metacluster_1/pattern_19 0.0226554
Sox2	Pattern Name Modisco Significance metacluster_1/pattern_3 3.52923e-06 metacluster_1/pattern_8 0.054895900000000004 metacluster_1/pattern_12 0.0430166 metacluster_1/pattern_19 0.0226554
Pou2f2	Pattern Name Modisco Significance metacluster_1/pattern_3 0.0547164
Lef1	Pattern Name Modisco Significance metacluster_1/pattern_3 0.039163699999999996 metacluster_1/pattern_19 0.025347900000000003
Sox30	Pattern Name Modisco Significance metacluster_1/pattern_3 0.0527568 metacluster_1/pattern_12 0.0430166
Sox14	Pattern Name Modisco Significance metacluster_1/pattern_3 0.058702
Nrf1	Pattern Name Modisco Significance metacluster_1/pattern_4 9.00733e-11
Gabpa	Pattern Name Modisco Significance metacluster_1/pattern_6 0.00328311
Elf1	Pattern Name Modisco Significance metacluster_1/pattern_6 8.30234e-08
Elk1	Pattern Name Modisco Significance metacluster_1/pattern_6 0.00328311
Fli1	Pattern Name Modisco Significance metacluster_1/pattern_6 0.004435100000000001
Elk4	Pattern Name Modisco Significance metacluster_1/pattern_6 0.00439958
Elk3	Pattern Name Modisco Significance metacluster_1/pattern_6 0.00328311
Erg	Pattern Name Modisco Significance metacluster_1/pattern_6 0.00439958
Ets1	Pattern Name Modisco Significance metacluster_1/pattern_6 0.0056138
Elf5	Pattern Name Modisco Significance metacluster_1/pattern_6 0.00993519
Etv5	Pattern Name Modisco Significance metacluster_1/pattern_6 0.00289461
Fev	Pattern Name Modisco Significance metacluster_1/pattern_6 0.00320609
Etv1	Pattern Name Modisco Significance metacluster_1/pattern_6 0.00350819
Etv4	Pattern Name Modisco Significance metacluster_1/pattern_6 0.004435100000000001
Elf2	Pattern Name Modisco Significance metacluster_1/pattern_6 0.0064843999999999995
Elf4	Pattern Name Modisco Significance metacluster_1/pattern_6 0.00361824
Etv6	Pattern Name Modisco Significance metacluster_1/pattern_6 0.00439958
Ehf	Pattern Name Modisco Significance metacluster_1/pattern_6 0.00552845
XP_911724.4	Pattern Name Modisco Significance metacluster_1/pattern_6 0.0056138
Etv3	Pattern Name Modisco Significance metacluster_1/pattern_6 0.0058892
Etv2	Pattern Name Modisco Significance metacluster_1/pattern_6 0.013558
Elf3	Pattern Name Modisco Significance metacluster_1/pattern_6 0.021403
Spi1	Pattern Name Modisco Significance metacluster_1/pattern_6 0.019090299999999998
Spdef	Pattern Name Modisco Significance metacluster_1/pattern_6 0.028745499999999997
Stat3	Pattern Name Modisco Significance metacluster_1/pattern_6 0.0533429
E2f1	Pattern Name Modisco Significance metacluster_1/pattern_7 0.027579900000000004
Ptf1a	Pattern Name Modisco Significance metacluster_1/pattern_7 0.0410677
Zscan10	Pattern Name Modisco Significance metacluster_1/pattern_7 0.0548703
Rfx2	Pattern Name Modisco Significance metacluster_1/pattern_8 0.027512900000000003
Rfx3	Pattern Name Modisco Significance metacluster_1/pattern_8 0.00397921
Rfx1	Pattern Name Modisco Significance metacluster_1/pattern_8 9.00413e-07 metacluster_1/pattern_18 0.04718030000000001
Rfx4	Pattern Name Modisco Significance metacluster_1/pattern_8 5.87933e-05
Rfx6	Pattern Name Modisco Significance metacluster_1/pattern_8 7.26414e-05
Rfx7	Pattern Name Modisco Significance metacluster_1/pattern_8 0.00160188
Tead4	Pattern Name Modisco Significance metacluster_1/pattern_9 0.0005604609999999999
Tead2	Pattern Name Modisco Significance metacluster_1/pattern_9 0.00165477
Tead1	Pattern Name Modisco Significance metacluster_1/pattern_9 0.00484511
Yy1	Pattern Name Modisco Significance metacluster_1/pattern_10 4.78475e-06
Taf1	Pattern Name Modisco Significance metacluster_1/pattern_10 4.78475e-06
Zfp42	Pattern Name Modisco Significance metacluster_1/pattern_10 0.00802835
Usf1	Pattern Name Modisco Significance metacluster_1/pattern_11 0.00248042 metacluster_1/pattern_18 0.0115684
Usf2	Pattern Name Modisco Significance metacluster_1/pattern_11 0.00056073 metacluster_1/pattern_18 5.9367600000000004e-05
Tfec	Pattern Name Modisco Significance metacluster_1/pattern_11 0.000621841
Tfeb	Pattern Name Modisco Significance metacluster_1/pattern_11 0.000817595
Tfe3	Pattern Name Modisco Significance metacluster_1/pattern_11 0.0007589439999999999
Mitf	Pattern Name Modisco Significance metacluster_1/pattern_11 0.00056073
Srebf1	Pattern Name Modisco Significance metacluster_1/pattern_11 0.00370175
Arntl	Pattern Name Modisco Significance metacluster_1/pattern_11 0.0103847
Clock	Pattern Name Modisco Significance metacluster_1/pattern_11 0.030794
Bhlhe40	Pattern Name Modisco Significance metacluster_1/pattern_11 0.024819400000000002
Mlx	Pattern Name Modisco Significance metacluster_1/pattern_11 0.00939876
Arnt	Pattern Name Modisco Significance metacluster_1/pattern_11 0.0357978
Npas2	Pattern Name Modisco Significance metacluster_1/pattern_11 0.0478085
Creb3l2	Pattern Name Modisco Significance metacluster_1/pattern_11 0.0234422
Tcfl5	Pattern Name Modisco Significance metacluster_1/pattern_11 0.00724237
Mycn	Pattern Name Modisco Significance metacluster_1/pattern_11 0.0234422
Max	Pattern Name Modisco Significance metacluster_1/pattern_11 0.024819400000000002
Xbp1	Pattern Name Modisco Significance metacluster_1/pattern_11 0.0234422
Atf1	Pattern Name Modisco Significance metacluster_1/pattern_11 0.0289068 metacluster_1/pattern_18 0.0207691
Bhlhe41	Pattern Name Modisco Significance metacluster_1/pattern_11 0.030794
Myc	Pattern Name Modisco Significance metacluster_1/pattern_11 0.0478085
Mlxip	Pattern Name Modisco Significance metacluster_1/pattern_11 0.0448798
Hlf	Pattern Name Modisco Significance metacluster_1/pattern_11 0.0508336 metacluster_1/pattern_18 0.0296277
Dbp	Pattern Name Modisco Significance metacluster_1/pattern_11 0.05572080000000001
Sry	Pattern Name Modisco Significance metacluster_1/pattern_12 0.0430166
Sox17	Pattern Name Modisco Significance metacluster_1/pattern_12 0.0444414
Esrrb	Pattern Name Modisco Significance metacluster_1/pattern_13 0.00484486
Nr5a2	Pattern Name Modisco Significance metacluster_1/pattern_13 0.00157595
Rarg	Pattern Name Modisco Significance metacluster_1/pattern_13 9.9462e-05
Esrra	Pattern Name Modisco Significance metacluster_1/pattern_13 0.00599943
Esrrg	Pattern Name Modisco Significance metacluster_1/pattern_13 0.00413907
Rara	Pattern Name Modisco Significance metacluster_1/pattern_13 0.00176915
Nr5a1	Pattern Name Modisco Significance metacluster_1/pattern_13 0.00202159
Rxrg	Pattern Name Modisco Significance metacluster_1/pattern_13 0.00257074
Rxra	Pattern Name Modisco Significance metacluster_1/pattern_13 0.015365100000000001
Hnf4a	Pattern Name Modisco Significance metacluster_1/pattern_13 0.016527700000000003
Hnf4g	Pattern Name Modisco Significance metacluster_1/pattern_13 0.00684787
Nr2c2	Pattern Name Modisco Significance metacluster_1/pattern_13 0.0121886
Rxrb	Pattern Name Modisco Significance metacluster_1/pattern_13 0.0158074
Nr2f6	Pattern Name Modisco Significance metacluster_1/pattern_13 0.025706299999999998
Nr4a2	Pattern Name Modisco Significance metacluster_1/pattern_13 0.04683180000000001
Zfp143	Pattern Name Modisco Significance metacluster_1/pattern_14 1.00621e-21
Thap11	Pattern Name Modisco Significance metacluster_1/pattern_14 1.34104e-19
Tbx2	Pattern Name Modisco Significance metacluster_1/pattern_14 2.75607e-13
Zic2	Pattern Name Modisco Significance metacluster_1/pattern_16 4.8958699999999996e-05
Zic3	Pattern Name Modisco Significance metacluster_1/pattern_16 0.00107242
Bach2	Pattern Name Modisco Significance metacluster_1/pattern_17 3.38683e-09
Nfe2	Pattern Name Modisco Significance metacluster_1/pattern_17 4.07592e-08
Nfe2l2	Pattern Name Modisco Significance metacluster_1/pattern_17 9.035689999999999e-08
Bach1	Pattern Name Modisco Significance metacluster_1/pattern_17 1.4862399999999999e-06
Mafk	Pattern Name Modisco Significance metacluster_1/pattern_17 0.0008444889999999999
Mafa	Pattern Name Modisco Significance metacluster_1/pattern_17 0.000519866
Jun	Pattern Name Modisco Significance metacluster_1/pattern_17 0.0008444889999999999 metacluster_1/pattern_18 0.04718030000000001
Mafg	Pattern Name Modisco Significance metacluster_1/pattern_17 0.00188328
Mafb	Pattern Name Modisco Significance metacluster_1/pattern_17 0.0021582
Maff	Pattern Name Modisco Significance metacluster_1/pattern_17 0.0021582
Atf3	Pattern Name Modisco Significance metacluster_1/pattern_17 0.0021582 metacluster_1/pattern_18 0.00867635
Fosl2	Pattern Name Modisco Significance metacluster_1/pattern_17 0.00420132 metacluster_1/pattern_18 0.014093000000000001
Fosb	Pattern Name Modisco Significance metacluster_1/pattern_17 0.00277257
Junb	Pattern Name Modisco Significance metacluster_1/pattern_17 0.00296721
Maf	Pattern Name Modisco Significance metacluster_1/pattern_17 0.00296721
Fosl1	Pattern Name Modisco Significance metacluster_1/pattern_17 0.00358431
Jund	Pattern Name Modisco Significance metacluster_1/pattern_17 0.0546552
Batf	Pattern Name Modisco Significance metacluster_1/pattern_17 0.0412934
Fos	Pattern Name Modisco Significance metacluster_1/pattern_17 0.00591118
Jdp2	Pattern Name Modisco Significance metacluster_1/pattern_17 0.00950299 metacluster_1/pattern_18 0.0008072139999999999
Creb1	Pattern Name Modisco Significance metacluster_1/pattern_18 0.00371293
Atf2	Pattern Name Modisco Significance metacluster_1/pattern_18 0.000698753
Atf7	Pattern Name Modisco Significance metacluster_1/pattern_18 0.000104239
Crem	Pattern Name Modisco Significance metacluster_1/pattern_18 0.00632069
Creb5	Pattern Name Modisco Significance metacluster_1/pattern_18 0.0007962430000000001
Nfil3	Pattern Name Modisco Significance metacluster_1/pattern_18 0.0188073
Nr1h4	Pattern Name Modisco Significance metacluster_1/pattern_18 0.0379188
Tef	Pattern Name Modisco Significance metacluster_1/pattern_18 0.0391449
Vsx2	Pattern Name Modisco Significance metacluster_1/pattern_19 0.025347900000000003
Mnx1	Pattern Name Modisco Significance metacluster_1/pattern_19 0.025347900000000003
Lhx2	Pattern Name Modisco Significance metacluster_1/pattern_19 0.05354640000000001
Lhx9	Pattern Name Modisco Significance metacluster_1/pattern_19 0.025858099999999995
Nobox	Pattern Name Modisco Significance metacluster_1/pattern_19 0.05144259999999999
Prrx2	Pattern Name Modisco Significance metacluster_1/pattern_19 0.0351718
Lhx3	Pattern Name Modisco Significance metacluster_1/pattern_19 0.0586566
Msx3	Pattern Name Modisco Significance metacluster_1/pattern_19 0.033016199999999996
Esx1	Pattern Name Modisco Significance metacluster_1/pattern_19 0.033016199999999996
Hand1	Pattern Name Modisco Significance metacluster_1/pattern_19 0.033016199999999996
Rhox6	Pattern Name Modisco Significance metacluster_1/pattern_19 0.033016199999999996
Msx2	Pattern Name Modisco Significance metacluster_1/pattern_19 0.033016199999999996
Arx	Pattern Name Modisco Significance metacluster_1/pattern_19 0.033016199999999996
Pax6	Pattern Name Modisco Significance metacluster_1/pattern_19 0.033016199999999996
Lbx2	Pattern Name Modisco Significance metacluster_1/pattern_19 0.0332122
Alx1	Pattern Name Modisco Significance metacluster_1/pattern_19 0.03993119999999999
Gbx2	Pattern Name Modisco Significance metacluster_1/pattern_19 0.0332122
Pou1f1	Pattern Name Modisco Significance metacluster_1/pattern_19 0.0341902
Prrx1	Pattern Name Modisco Significance metacluster_1/pattern_19 0.0341902
Lhx1	Pattern Name Modisco Significance metacluster_1/pattern_19 0.0351718
Shox2	Pattern Name Modisco Significance metacluster_1/pattern_19 0.0351718
Alx4	Pattern Name Modisco Significance metacluster_1/pattern_19 0.0351718
Hoxa3	Pattern Name Modisco Significance metacluster_1/pattern_19 0.0364348
En1	Pattern Name Modisco Significance metacluster_1/pattern_19 0.037242199999999996
Lhx5	Pattern Name Modisco Significance metacluster_1/pattern_19 0.0414254
Otp	Pattern Name Modisco Significance metacluster_1/pattern_19 0.04163719999999999
Gbx1	Pattern Name Modisco Significance metacluster_1/pattern_19 0.04163719999999999
Lhx4	Pattern Name Modisco Significance metacluster_1/pattern_19 0.04163719999999999
Alx3	Pattern Name Modisco Significance metacluster_1/pattern_19 0.0456924
Emx2	Pattern Name Modisco Significance metacluster_1/pattern_19 0.048668699999999995
Hmx2	Pattern Name Modisco Significance metacluster_1/pattern_19 0.0496519
Uncx	Pattern Name Modisco Significance metacluster_1/pattern_19 0.0496519
Nkx1-1	Pattern Name Modisco Significance metacluster_1/pattern_19 0.05144259999999999
Hoxd3	Pattern Name Modisco Significance metacluster_1/pattern_19 0.05144259999999999
Lhx6	Pattern Name Modisco Significance metacluster_1/pattern_19 0.05144259999999999
En2	Pattern Name Modisco Significance metacluster_1/pattern_19 0.0531252
Evx1	Pattern Name Modisco Significance metacluster_1/pattern_19 0.0531252
Barhl2	Pattern Name Modisco Significance metacluster_1/pattern_19 0.0531252
Pou3f4	Pattern Name Modisco Significance metacluster_1/pattern_19 0.05354640000000001
Prop1	Pattern Name Modisco Significance metacluster_1/pattern_19 0.05354640000000001
Gsx2	Pattern Name Modisco Significance metacluster_1/pattern_19 0.05354640000000001
Lhx8	Pattern Name Modisco Significance metacluster_1/pattern_19 0.05354640000000001
Sebox	Pattern Name Modisco Significance metacluster_1/pattern_19 0.05457530000000001
Hoxd1	Pattern Name Modisco Significance metacluster_1/pattern_19 0.0573293
Tcfcp2l1	Pattern Name Modisco Significance metacluster_1/pattern_21 0.0015879000000000002
Grhl2	Pattern Name Modisco Significance metacluster_1/pattern_21 0.0028166
Six2	Pattern Name Modisco Significance metacluster_1/pattern_22 5.50756e-08
Six1	Pattern Name Modisco Significance metacluster_1/pattern_22 2.17871e-05
Six4	Pattern Name Modisco Significance metacluster_1/pattern_22 7.08555e-05
Rest	Pattern Name Modisco Significance metacluster_1/pattern_23 1.57909e-14 metacluster_1/pattern_25 0.00072303
Nfia	Pattern Name Modisco Significance metacluster_1/pattern_28 0.000114801
Nfib	Pattern Name Modisco Significance metacluster_1/pattern_28 0.00027058

display_paiwise_pattern_comparison(data_name, modisco_root, homer_root)

Number of CISBP TFs obtained by TF-MoDISco and Homer

Shared TFs between TF-MoDISco and Homer: #85

TF Name	Modisco	Homer
Ctcfl	Pattern Name Modisco Significance metacluster_1/pattern_1 9.34946e-10	Pattern Name Homer Significance motif1.motif 0.000375136
Rfx7	Pattern Name Modisco Significance metacluster_1/pattern_8 0.00160188	Pattern Name Homer Significance motif23.motif 0.0127337
Atf7	Pattern Name Modisco Significance metacluster_1/pattern_18 0.000104239	Pattern Name Homer Significance motif17.motif 0.046310000000000004
Mitf	Pattern Name Modisco Significance metacluster_1/pattern_11 0.00056073	Pattern Name Homer Significance motif17.motif 0.00530066
Ctcf	Pattern Name Modisco Significance metacluster_1/pattern_1 1.02677e-09 metacluster_1/pattern_15 0.00844935	Pattern Name Homer Significance motif1.motif 4.77164e-05
Klf7	Pattern Name Modisco Significance metacluster_1/pattern_0 0.00132928 metacluster_1/pattern_7 0.026291200000000004	Pattern Name Homer Significance motif2.motif 0.00010031299999999999
Bhlhe40	Pattern Name Modisco Significance metacluster_1/pattern_11 0.024819400000000002	Pattern Name Homer Significance motif17.motif 0.00978365
Klf4	Pattern Name Modisco Significance metacluster_1/pattern_0 0.0018854 metacluster_1/pattern_7 0.0410677	Pattern Name Homer Significance motif2.motif 0.00412374
Nr5a2	Pattern Name Modisco Significance metacluster_1/pattern_13 0.00157595	Pattern Name Homer Significance motif22.motif 0.031004000000000004
Klf3	Pattern Name Modisco Significance metacluster_1/pattern_0 0.00165683 metacluster_1/pattern_7 0.00980815	Pattern Name Homer Significance motif2.motif 1.19356e-05
Nr5a1	Pattern Name Modisco Significance metacluster_1/pattern_13 0.00202159	Pattern Name Homer Significance motif22.motif 0.00284012
Usf1	Pattern Name Modisco Significance metacluster_1/pattern_11 0.00248042 metacluster_1/pattern_18 0.0115684	Pattern Name Homer Significance motif17.motif 0.0140862
Klf8	Pattern Name Modisco Significance metacluster_1/pattern_0 0.00187363 metacluster_1/pattern_7 0.027579900000000004	Pattern Name Homer Significance motif2.motif 0.000127344
Nanog	Pattern Name Modisco Significance metacluster_1/pattern_3 2.87339e-09 metacluster_1/pattern_19 0.0226554	Pattern Name Homer Significance motif9.motif 1.1418399999999999e-05
Esrrb	Pattern Name Modisco Significance metacluster_1/pattern_13 0.00484486	Pattern Name Homer Significance motif22.motif 0.0298404
Rfx3	Pattern Name Modisco Significance metacluster_1/pattern_8 0.00397921	Pattern Name Homer Significance motif23.motif 0.0326068
Elk1	Pattern Name Modisco Significance metacluster_1/pattern_6 0.00328311	Pattern Name Homer Significance motif7.motif 0.054182299999999996
Nfyc	Pattern Name Modisco Significance metacluster_1/pattern_2 3.1064800000000004e-07	Pattern Name Homer Significance motif5.motif 4.0438999999999995e-06
Fli1	Pattern Name Modisco Significance metacluster_1/pattern_6 0.004435100000000001	Pattern Name Homer Significance motif7.motif 0.051369399999999996
XP_911724.4	Pattern Name Modisco Significance metacluster_1/pattern_6 0.0056138	Pattern Name Homer Significance motif7.motif 0.051369399999999996
Tcfl5	Pattern Name Modisco Significance metacluster_1/pattern_11 0.00724237	Pattern Name Homer Significance motif17.motif 0.024940200000000003
E2f4	Pattern Name Modisco Significance metacluster_1/pattern_0 0.00234167 metacluster_1/pattern_7 0.0118474	Pattern Name Homer Significance motif2.motif 0.00329641
Esrra	Pattern Name Modisco Significance metacluster_1/pattern_13 0.00599943	Pattern Name Homer Significance motif22.motif 0.011923999999999999
Rfx4	Pattern Name Modisco Significance metacluster_1/pattern_8 5.87933e-05	Pattern Name Homer Significance motif23.motif 0.000162359
Etv1	Pattern Name Modisco Significance metacluster_1/pattern_6 0.00350819	Pattern Name Homer Significance motif7.motif 0.051369399999999996
Zfp143	Pattern Name Modisco Significance metacluster_1/pattern_14 1.00621e-21	Pattern Name Homer Significance motif11.motif 0.000979934
Tbx2	Pattern Name Modisco Significance metacluster_1/pattern_14 2.75607e-13	Pattern Name Homer Significance motif11.motif 0.000333833
Mycn	Pattern Name Modisco Significance metacluster_1/pattern_11 0.0234422	Pattern Name Homer Significance motif17.motif 0.043205099999999996
Ehf	Pattern Name Modisco Significance metacluster_1/pattern_6 0.00552845	Pattern Name Homer Significance motif7.motif 0.05688819999999999
Rarg	Pattern Name Modisco Significance metacluster_1/pattern_13 9.9462e-05	Pattern Name Homer Significance motif22.motif 0.00132819
Etv5	Pattern Name Modisco Significance metacluster_1/pattern_6 0.00289461	Pattern Name Homer Significance motif7.motif 0.051369399999999996
Egr1	Pattern Name Modisco Significance metacluster_1/pattern_0 0.023202200000000003 metacluster_1/pattern_7 0.026915300000000003	Pattern Name Homer Significance motif2.motif 0.014486500000000001
Srebf1	Pattern Name Modisco Significance metacluster_1/pattern_11 0.00370175	Pattern Name Homer Significance motif17.motif 0.0123321
Crem	Pattern Name Modisco Significance metacluster_1/pattern_18 0.00632069	Pattern Name Homer Significance motif17.motif 0.00385326
Rxra	Pattern Name Modisco Significance metacluster_1/pattern_13 0.015365100000000001	Pattern Name Homer Significance motif22.motif 0.000371962
Etv6	Pattern Name Modisco Significance metacluster_1/pattern_6 0.00439958	Pattern Name Homer Significance motif7.motif 0.051369399999999996
Elk3	Pattern Name Modisco Significance metacluster_1/pattern_6 0.00328311	Pattern Name Homer Significance motif7.motif 0.0520842
Elf2	Pattern Name Modisco Significance metacluster_1/pattern_6 0.0064843999999999995	Pattern Name Homer Significance motif7.motif 0.0520842
Rxrg	Pattern Name Modisco Significance metacluster_1/pattern_13 0.00257074	Pattern Name Homer Significance motif22.motif 0.000334837
Rfx2	Pattern Name Modisco Significance metacluster_1/pattern_8 0.027512900000000003	Pattern Name Homer Significance motif23.motif 1.75443e-05
Ets1	Pattern Name Modisco Significance metacluster_1/pattern_6 0.0056138	Pattern Name Homer Significance motif7.motif 0.051369399999999996
Tfeb	Pattern Name Modisco Significance metacluster_1/pattern_11 0.000817595	Pattern Name Homer Significance motif17.motif 0.0035543
Etv4	Pattern Name Modisco Significance metacluster_1/pattern_6 0.004435100000000001	Pattern Name Homer Significance motif7.motif 0.051369399999999996
Sox2	Pattern Name Modisco Significance metacluster_1/pattern_3 3.52923e-06 metacluster_1/pattern_8 0.054895900000000004 metacluster_1/pattern_12 0.0430166 metacluster_1/pattern_19 0.0226554	Pattern Name Homer Significance motif9.motif 1.5776e-05
Nfyb	Pattern Name Modisco Significance metacluster_1/pattern_2 5.45368e-10	Pattern Name Homer Significance motif5.motif 8.95455e-08
Klf1	Pattern Name Modisco Significance metacluster_1/pattern_0 0.036925400000000004 metacluster_1/pattern_7 0.056311900000000005	Pattern Name Homer Significance motif2.motif 0.000855567
Sp1	Pattern Name Modisco Significance metacluster_1/pattern_0 0.000283626 metacluster_1/pattern_7 0.022603400000000003 metacluster_1/pattern_18 0.0484171	Pattern Name Homer Significance motif2.motif 0.033798
Sp2	Pattern Name Modisco Significance metacluster_1/pattern_0 0.000119161 metacluster_1/pattern_7 0.00303662 metacluster_1/pattern_18 0.012820400000000001	Pattern Name Homer Significance motif2.motif 0.000855567
Sp3	Pattern Name Modisco Significance metacluster_1/pattern_0 0.000119161 metacluster_1/pattern_7 0.00137251	Pattern Name Homer Significance motif2.motif 0.00329641
Tfe3	Pattern Name Modisco Significance metacluster_1/pattern_11 0.0007589439999999999	Pattern Name Homer Significance motif17.motif 0.00791741
Nrf1	Pattern Name Modisco Significance metacluster_1/pattern_4 9.00733e-11	Pattern Name Homer Significance motif10.motif 6.43019e-05
Thap11	Pattern Name Modisco Significance metacluster_1/pattern_14 1.34104e-19	Pattern Name Homer Significance motif11.motif 0.00201808
Erg	Pattern Name Modisco Significance metacluster_1/pattern_6 0.00439958	Pattern Name Homer Significance motif7.motif 0.051369399999999996
Pbx3	Pattern Name Modisco Significance metacluster_1/pattern_2 0.00153709	Pattern Name Homer Significance motif5.motif 0.00044322
Creb1	Pattern Name Modisco Significance metacluster_1/pattern_18 0.00371293	Pattern Name Homer Significance motif17.motif 0.0254962
Klf12	Pattern Name Modisco Significance metacluster_1/pattern_0 0.0018854 metacluster_1/pattern_7 0.0410677	Pattern Name Homer Significance motif2.motif 0.000648997
Elk4	Pattern Name Modisco Significance metacluster_1/pattern_6 0.00439958	Pattern Name Homer Significance motif7.motif 0.051369399999999996
Bhlhe41	Pattern Name Modisco Significance metacluster_1/pattern_11 0.030794	Pattern Name Homer Significance motif17.motif 0.00791741
Etv3	Pattern Name Modisco Significance metacluster_1/pattern_6 0.0058892	Pattern Name Homer Significance motif7.motif 0.051369399999999996
Rara	Pattern Name Modisco Significance metacluster_1/pattern_13 0.00176915	Pattern Name Homer Significance motif22.motif 1.37287e-05
Creb5	Pattern Name Modisco Significance metacluster_1/pattern_18 0.0007962430000000001	Pattern Name Homer Significance motif17.motif 0.014513299999999998
Clock	Pattern Name Modisco Significance metacluster_1/pattern_11 0.030794	Pattern Name Homer Significance motif17.motif 0.00515905
Srebf2	Pattern Name Modisco Significance metacluster_1/pattern_0 0.0168623 metacluster_1/pattern_11 0.00861168	Pattern Name Homer Significance motif17.motif 0.00100277
Jdp2	Pattern Name Modisco Significance metacluster_1/pattern_17 0.00950299 metacluster_1/pattern_18 0.0008072139999999999	Pattern Name Homer Significance motif17.motif 0.0439849
Usf2	Pattern Name Modisco Significance metacluster_1/pattern_11 0.00056073 metacluster_1/pattern_18 5.9367600000000004e-05	Pattern Name Homer Significance motif17.motif 0.0202472
Mlx	Pattern Name Modisco Significance metacluster_1/pattern_11 0.00939876	Pattern Name Homer Significance motif17.motif 0.043205099999999996
Rfx6	Pattern Name Modisco Significance metacluster_1/pattern_8 7.26414e-05	Pattern Name Homer Significance motif23.motif 0.0204467
Pou5f1	Pattern Name Modisco Significance metacluster_1/pattern_3 5.01682e-06 metacluster_1/pattern_19 0.033016199999999996	Pattern Name Homer Significance motif9.motif 3.12024e-05
Esrrg	Pattern Name Modisco Significance metacluster_1/pattern_13 0.00413907	Pattern Name Homer Significance motif22.motif 0.033596499999999994
Tfec	Pattern Name Modisco Significance metacluster_1/pattern_11 0.000621841	Pattern Name Homer Significance motif17.motif 0.00918148
Npas2	Pattern Name Modisco Significance metacluster_1/pattern_11 0.0478085	Pattern Name Homer Significance motif17.motif 0.0257497
Arnt	Pattern Name Modisco Significance metacluster_1/pattern_11 0.0357978	Pattern Name Homer Significance motif17.motif 0.0395652
Nfya	Pattern Name Modisco Significance metacluster_1/pattern_2 4.103e-08	Pattern Name Homer Significance motif5.motif 3.50789e-06
Foxi1	Pattern Name Modisco Significance metacluster_1/pattern_2 1.94369e-05	Pattern Name Homer Significance motif5.motif 0.00043305599999999997
Rfx1	Pattern Name Modisco Significance metacluster_1/pattern_8 9.00413e-07 metacluster_1/pattern_18 0.04718030000000001	Pattern Name Homer Significance motif23.motif 5.22605e-08
Atf1	Pattern Name Modisco Significance metacluster_1/pattern_11 0.0289068 metacluster_1/pattern_18 0.0207691	Pattern Name Homer Significance motif17.motif 0.00376748
Pou2f2	Pattern Name Modisco Significance metacluster_1/pattern_3 0.0547164	Pattern Name Homer Significance motif9.motif 0.013761099999999998
Gabpa	Pattern Name Modisco Significance metacluster_1/pattern_6 0.00328311	Pattern Name Homer Significance motif7.motif 0.0520842
Atf2	Pattern Name Modisco Significance metacluster_1/pattern_18 0.000698753	Pattern Name Homer Significance motif17.motif 0.0161585
Creb3l2	Pattern Name Modisco Significance metacluster_1/pattern_11 0.0234422	Pattern Name Homer Significance motif17.motif 0.0364707
Arntl	Pattern Name Modisco Significance metacluster_1/pattern_11 0.0103847	Pattern Name Homer Significance motif17.motif 0.029183999999999998
Klf5	Pattern Name Modisco Significance metacluster_1/pattern_0 0.000119161 metacluster_1/pattern_7 0.0247419	Pattern Name Homer Significance motif2.motif 0.00329641
Sp4	Pattern Name Modisco Significance metacluster_1/pattern_0 0.00323953 metacluster_1/pattern_7 0.0357486	Pattern Name Homer Significance motif2.motif 0.0477015
Elf4	Pattern Name Modisco Significance metacluster_1/pattern_6 0.00361824	Pattern Name Homer Significance motif7.motif 0.054182299999999996
Klf6	Pattern Name Modisco Significance metacluster_1/pattern_0 0.000262755 metacluster_1/pattern_7 0.0118474	Pattern Name Homer Significance motif2.motif 0.000195207

Unique TF-MoDISco TFs: #124

TF Name	Modisco	Homer
Sall4	Pattern Name Modisco Significance metacluster_1/pattern_0 0.00183521 metacluster_1/pattern_7 0.0224272	Absent
Lhx1	Pattern Name Modisco Significance metacluster_1/pattern_19 0.0351718	Absent
Rhox6	Pattern Name Modisco Significance metacluster_1/pattern_19 0.033016199999999996	Absent
Fos	Pattern Name Modisco Significance metacluster_1/pattern_17 0.00591118	Absent
Stat3	Pattern Name Modisco Significance metacluster_1/pattern_6 0.0533429	Absent
Jun	Pattern Name Modisco Significance metacluster_1/pattern_17 0.0008444889999999999 metacluster_1/pattern_18 0.04718030000000001	Absent
Prrx1	Pattern Name Modisco Significance metacluster_1/pattern_19 0.0341902	Absent
Pou1f1	Pattern Name Modisco Significance metacluster_1/pattern_19 0.0341902	Absent
Alx3	Pattern Name Modisco Significance metacluster_1/pattern_19 0.0456924	Absent
Rest	Pattern Name Modisco Significance metacluster_1/pattern_23 1.57909e-14 metacluster_1/pattern_25 0.00072303	Absent
Hlf	Pattern Name Modisco Significance metacluster_1/pattern_11 0.0508336 metacluster_1/pattern_18 0.0296277	Absent
Alx4	Pattern Name Modisco Significance metacluster_1/pattern_19 0.0351718	Absent
Dbp	Pattern Name Modisco Significance metacluster_1/pattern_11 0.05572080000000001	Absent
Maf	Pattern Name Modisco Significance metacluster_1/pattern_17 0.00296721	Absent
Hnf4a	Pattern Name Modisco Significance metacluster_1/pattern_13 0.016527700000000003	Absent
Gbx2	Pattern Name Modisco Significance metacluster_1/pattern_19 0.0332122	Absent
Zic3	Pattern Name Modisco Significance metacluster_1/pattern_16 0.00107242	Absent
Alx1	Pattern Name Modisco Significance metacluster_1/pattern_19 0.03993119999999999	Absent
Fosl2	Pattern Name Modisco Significance metacluster_1/pattern_17 0.00420132 metacluster_1/pattern_18 0.014093000000000001	Absent
Myc	Pattern Name Modisco Significance metacluster_1/pattern_11 0.0478085	Absent
Rela	Pattern Name Modisco Significance metacluster_1/pattern_0 0.0230102	Absent
Six1	Pattern Name Modisco Significance metacluster_1/pattern_22 2.17871e-05	Absent
Xbp1	Pattern Name Modisco Significance metacluster_1/pattern_11 0.0234422	Absent
Lhx2	Pattern Name Modisco Significance metacluster_1/pattern_19 0.05354640000000001	Absent
Mlxip	Pattern Name Modisco Significance metacluster_1/pattern_11 0.0448798	Absent
Prrx2	Pattern Name Modisco Significance metacluster_1/pattern_19 0.0351718	Absent
Nr1h4	Pattern Name Modisco Significance metacluster_1/pattern_18 0.0379188	Absent
Nfia	Pattern Name Modisco Significance metacluster_1/pattern_28 0.000114801	Absent
Tead2	Pattern Name Modisco Significance metacluster_1/pattern_9 0.00165477	Absent
Pax6	Pattern Name Modisco Significance metacluster_1/pattern_19 0.033016199999999996	Absent
Lhx9	Pattern Name Modisco Significance metacluster_1/pattern_19 0.025858099999999995	Absent
Maz	Pattern Name Modisco Significance metacluster_1/pattern_0 0.000141939 metacluster_1/pattern_7 0.00239052	Absent
Mafk	Pattern Name Modisco Significance metacluster_1/pattern_17 0.0008444889999999999	Absent
Esx1	Pattern Name Modisco Significance metacluster_1/pattern_19 0.033016199999999996	Absent
Etv2	Pattern Name Modisco Significance metacluster_1/pattern_6 0.013558	Absent
Bach2	Pattern Name Modisco Significance metacluster_1/pattern_17 3.38683e-09	Absent
Lbx2	Pattern Name Modisco Significance metacluster_1/pattern_19 0.0332122	Absent
Zfp42	Pattern Name Modisco Significance metacluster_1/pattern_10 0.00802835	Absent
Gbx1	Pattern Name Modisco Significance metacluster_1/pattern_19 0.04163719999999999	Absent
Tfap2c	Pattern Name Modisco Significance metacluster_1/pattern_0 0.0200751	Absent
Lhx5	Pattern Name Modisco Significance metacluster_1/pattern_19 0.0414254	Absent
Six4	Pattern Name Modisco Significance metacluster_1/pattern_22 7.08555e-05	Absent
Emx2	Pattern Name Modisco Significance metacluster_1/pattern_19 0.048668699999999995	Absent
Six2	Pattern Name Modisco Significance metacluster_1/pattern_22 5.50756e-08	Absent
Arx	Pattern Name Modisco Significance metacluster_1/pattern_19 0.033016199999999996	Absent
Mafa	Pattern Name Modisco Significance metacluster_1/pattern_17 0.000519866	Absent
Gsx2	Pattern Name Modisco Significance metacluster_1/pattern_19 0.05354640000000001	Absent
Zfx	Pattern Name Modisco Significance metacluster_1/pattern_0 0.0178071 metacluster_1/pattern_18 0.050772000000000005	Absent
Wt1	Pattern Name Modisco Significance metacluster_1/pattern_0 0.000119161 metacluster_1/pattern_7 0.00260512	Absent
Hoxa3	Pattern Name Modisco Significance metacluster_1/pattern_19 0.0364348	Absent
Vsx2	Pattern Name Modisco Significance metacluster_1/pattern_19 0.025347900000000003	Absent
Msx2	Pattern Name Modisco Significance metacluster_1/pattern_19 0.033016199999999996	Absent
Prop1	Pattern Name Modisco Significance metacluster_1/pattern_19 0.05354640000000001	Absent
Lhx8	Pattern Name Modisco Significance metacluster_1/pattern_19 0.05354640000000001	Absent
Batf	Pattern Name Modisco Significance metacluster_1/pattern_17 0.0412934	Absent
Sox30	Pattern Name Modisco Significance metacluster_1/pattern_3 0.0527568 metacluster_1/pattern_12 0.0430166	Absent
Tcfcp2l1	Pattern Name Modisco Significance metacluster_1/pattern_21 0.0015879000000000002	Absent
Sry	Pattern Name Modisco Significance metacluster_1/pattern_12 0.0430166	Absent
Nobox	Pattern Name Modisco Significance metacluster_1/pattern_19 0.05144259999999999	Absent
Zscan10	Pattern Name Modisco Significance metacluster_1/pattern_7 0.0548703	Absent
Sox17	Pattern Name Modisco Significance metacluster_1/pattern_12 0.0444414	Absent
Nfil3	Pattern Name Modisco Significance metacluster_1/pattern_18 0.0188073	Absent
Rxrb	Pattern Name Modisco Significance metacluster_1/pattern_13 0.0158074	Absent
Nfe2l2	Pattern Name Modisco Significance metacluster_1/pattern_17 9.035689999999999e-08	Absent
Egr2	Pattern Name Modisco Significance metacluster_1/pattern_0 0.00360883 metacluster_1/pattern_7 0.0224272	Absent
Zfp740	Pattern Name Modisco Significance metacluster_1/pattern_0 0.0381004 metacluster_1/pattern_7 0.031604900000000005	Absent
Tead1	Pattern Name Modisco Significance metacluster_1/pattern_9 0.00484511	Absent
Nkx1-1	Pattern Name Modisco Significance metacluster_1/pattern_19 0.05144259999999999	Absent
Lhx3	Pattern Name Modisco Significance metacluster_1/pattern_19 0.0586566	Absent
Otp	Pattern Name Modisco Significance metacluster_1/pattern_19 0.04163719999999999	Absent
Maff	Pattern Name Modisco Significance metacluster_1/pattern_17 0.0021582	Absent
Elf3	Pattern Name Modisco Significance metacluster_1/pattern_6 0.021403	Absent
Gata1	Pattern Name Modisco Significance metacluster_1/pattern_0 0.0533707	Absent
Fev	Pattern Name Modisco Significance metacluster_1/pattern_6 0.00320609	Absent
Fosl1	Pattern Name Modisco Significance metacluster_1/pattern_17 0.00358431	Absent
Jund	Pattern Name Modisco Significance metacluster_1/pattern_17 0.0546552	Absent
Klf15	Pattern Name Modisco Significance metacluster_1/pattern_0 0.000119161 metacluster_1/pattern_7 0.010275	Absent
Sp5	Pattern Name Modisco Significance metacluster_1/pattern_0 0.000193053 metacluster_1/pattern_7 0.00239052	Absent
E2f6	Pattern Name Modisco Significance metacluster_1/pattern_0 0.0230102	Absent
Barhl2	Pattern Name Modisco Significance metacluster_1/pattern_19 0.0531252	Absent
Hmx2	Pattern Name Modisco Significance metacluster_1/pattern_19 0.0496519	Absent
En2	Pattern Name Modisco Significance metacluster_1/pattern_19 0.0531252	Absent
Ptf1a	Pattern Name Modisco Significance metacluster_1/pattern_7 0.0410677	Absent
Hnf4g	Pattern Name Modisco Significance metacluster_1/pattern_13 0.00684787	Absent
Mafb	Pattern Name Modisco Significance metacluster_1/pattern_17 0.0021582	Absent
Taf1	Pattern Name Modisco Significance metacluster_1/pattern_10 4.78475e-06	Absent
Pou3f4	Pattern Name Modisco Significance metacluster_1/pattern_19 0.05354640000000001	Absent
Nr2c2	Pattern Name Modisco Significance metacluster_1/pattern_13 0.0121886	Absent
Elf5	Pattern Name Modisco Significance metacluster_1/pattern_6 0.00993519	Absent
Elf1	Pattern Name Modisco Significance metacluster_1/pattern_6 8.30234e-08	Absent
Zbtb17	Pattern Name Modisco Significance metacluster_1/pattern_0 0.00132928 metacluster_1/pattern_7 0.00024109900000000002	Absent
Tef	Pattern Name Modisco Significance metacluster_1/pattern_18 0.0391449	Absent
Nr4a2	Pattern Name Modisco Significance metacluster_1/pattern_13 0.04683180000000001	Absent
Mnx1	Pattern Name Modisco Significance metacluster_1/pattern_19 0.025347900000000003	Absent
E2f1	Pattern Name Modisco Significance metacluster_1/pattern_7 0.027579900000000004	Absent
Nfe2	Pattern Name Modisco Significance metacluster_1/pattern_17 4.07592e-08	Absent
Tead4	Pattern Name Modisco Significance metacluster_1/pattern_9 0.0005604609999999999	Absent
Spi1	Pattern Name Modisco Significance metacluster_1/pattern_6 0.019090299999999998	Absent
Yy1	Pattern Name Modisco Significance metacluster_1/pattern_10 4.78475e-06	Absent
Fosb	Pattern Name Modisco Significance metacluster_1/pattern_17 0.00277257	Absent
Nr2f6	Pattern Name Modisco Significance metacluster_1/pattern_13 0.025706299999999998	Absent
Zfp281	Pattern Name Modisco Significance metacluster_1/pattern_0 0.0122846 metacluster_1/pattern_7 0.042896699999999996	Absent
Zic2	Pattern Name Modisco Significance metacluster_1/pattern_16 4.8958699999999996e-05	Absent
Spdef	Pattern Name Modisco Significance metacluster_1/pattern_6 0.028745499999999997	Absent
En1	Pattern Name Modisco Significance metacluster_1/pattern_19 0.037242199999999996	Absent
Grhl2	Pattern Name Modisco Significance metacluster_1/pattern_21 0.0028166	Absent
Nfib	Pattern Name Modisco Significance metacluster_1/pattern_28 0.00027058	Absent
Shox2	Pattern Name Modisco Significance metacluster_1/pattern_19 0.0351718	Absent
Sox14	Pattern Name Modisco Significance metacluster_1/pattern_3 0.058702	Absent
Lef1	Pattern Name Modisco Significance metacluster_1/pattern_3 0.039163699999999996 metacluster_1/pattern_19 0.025347900000000003	Absent
Atf3	Pattern Name Modisco Significance metacluster_1/pattern_17 0.0021582 metacluster_1/pattern_18 0.00867635	Absent
Evx1	Pattern Name Modisco Significance metacluster_1/pattern_19 0.0531252	Absent
Hoxd1	Pattern Name Modisco Significance metacluster_1/pattern_19 0.0573293	Absent
Sebox	Pattern Name Modisco Significance metacluster_1/pattern_19 0.05457530000000001	Absent
Mafg	Pattern Name Modisco Significance metacluster_1/pattern_17 0.00188328	Absent
Uncx	Pattern Name Modisco Significance metacluster_1/pattern_19 0.0496519	Absent
Lhx4	Pattern Name Modisco Significance metacluster_1/pattern_19 0.04163719999999999	Absent
Max	Pattern Name Modisco Significance metacluster_1/pattern_11 0.024819400000000002	Absent
Hoxd3	Pattern Name Modisco Significance metacluster_1/pattern_19 0.05144259999999999	Absent
Lhx6	Pattern Name Modisco Significance metacluster_1/pattern_19 0.05144259999999999	Absent
Msx3	Pattern Name Modisco Significance metacluster_1/pattern_19 0.033016199999999996	Absent
Bach1	Pattern Name Modisco Significance metacluster_1/pattern_17 1.4862399999999999e-06	Absent
Hand1	Pattern Name Modisco Significance metacluster_1/pattern_19 0.033016199999999996	Absent
Junb	Pattern Name Modisco Significance metacluster_1/pattern_17 0.00296721	Absent

Unique Homer TFs: #2

TF Name	Modisco	Homer
Zbtb33	Absent	Pattern Name Homer Significance motif16.motif 0.00161869
Nkx2-9	Absent	Pattern Name Homer Significance motif22.motif 0.033775