In [1]:
# Parameters
data_name = "ES;C57BL_6J;R1;D;En"
modisco_root = "/srv/scratch/msharmin/mouse_hem/with_tfd/full_mouse50/Naive_modisco2019"
tomtom_report_root = "http://mitra.stanford.edu/kundaje/msharmin/report/tomtom_outs/cells"
task_dir = "task_218-naivegw"
perf_file = "/srv/scratch/msharmin/mouse_hem/with_tfd/full_mouse50/fineFactorized/task_218-naivegw/NaiveauPRC.txt"
homer_root = "/srv/scratch/msharmin/mouse_hem/with_tfd/full_mouse50/Naive_scans"
reportfile = "/mnt/lab_data/kundaje/msharmin/annotations/filtering samples_MS2.xlsx"
sheetname = "filter23"
In [2]:
from matlas.reports import display_metadata
load data from labcluster
Using TensorFlow backend.
2019-08-30 19:29:47,860 [WARNING] git-lfs not installed
In [3]:
display_metadata(data_name, perf_file, reportfile, sheetname)
    Sample Information
    MetaData NameDescription
    Cell typeMus musculus strain C57BL/6J R1 stem cell
    Cell GroupES cells and embryonic tissues
    Experiment NameDHS
    Experiment GroupENCODE
    Pipeline Output
    replicateNaïve overlap peaksIDR peaksTSS enrichment (< 8 is very poor <10 is low)Final number of unique mapping, dup-filtered, chrM filtered readsNumber of reads in called peak regionsFraction of reads in called peak regionsNumber of reads in promoter regionsFraction of reads in promoter regionsNumber of reads in enhancer regionsFraction of reads in enhancer regions
    rep12642052032347.0633166825551NANANANANANA
    Modelling Metadata
    MetricValue
    auPRC0.5748
    Calibrated Recall at 50% FDR0.258
    Number of Positive Examples in Test Data117315
    Number of Negative Examples in Test Data7953536
    Imbalance Ratio in Test Data0.0145
    Test Chromosomeschr2, chr3, chr19
In [4]:
from matlas.reports import display_paiwise_pattern_comparison
from matlas.reports import display_denovo_patterns
In [5]:
display_denovo_patterns(data_name, modisco_root=modisco_root)
TF-MoDISco is using the TensorFlow backend.
The following two links show list of Denovo Patterns and corresponding Motifs discovered by TF-MoDISco
Click here for Denovo Patterns by TF-MoDISco: #29
Pattern NameTF Name(s)Modisco
metacluster_1/pattern_0 # seqlets: 4194 SequenceContrib ScoresHyp_Contrib Scores
Sp2, Klf5, Klf15, Sp3, Wt1, Klf4, Zfp281, Maz, Sp5, Klf1,

Sp1, Sp4, Klf6, Klf7, Zbtb17, Zfx, Egr1, Klf3, Sall4, Klf8, Klf12,

E2f4, Egr2, Zfp740, Srebf2, Tfap2c, Rela, E2f6, Gata1
metacluster_1/pattern_1 # seqlets: 3258 SequenceContrib ScoresHyp_Contrib Scores
Ctcf, Ctcfl
metacluster_1/pattern_2 # seqlets: 2300 SequenceContrib ScoresHyp_Contrib Scores
Nfyb, Nfya, Nfyc, Foxi1, Pbx3
metacluster_1/pattern_3 # seqlets: 1938 SequenceContrib ScoresHyp_Contrib Scores
Pou5f1, Nanog, Sox2, Pou2f2, Lef1, Sox30, Sox14
metacluster_1/pattern_4 # seqlets: 1554 SequenceContrib ScoresHyp_Contrib Scores
Nrf1
metacluster_1/pattern_5 # seqlets: 1551 SequenceContrib ScoresHyp_Contrib Scores
metacluster_1/pattern_6 # seqlets: 1426 SequenceContrib ScoresHyp_Contrib Scores
Gabpa, Elf1, Elk1, Fli1, Elk4, Elk3, Erg, Ets1, Elf5, Etv5,

Fev, Etv1, Etv4, Elf2, Elf4, Etv6, Ehf, XP_911724.4, Etv3, Etv2, Elf3,

Spi1, Spdef, Stat3
metacluster_1/pattern_7 # seqlets: 1240 SequenceContrib ScoresHyp_Contrib Scores
E2f1, Ptf1a, Zscan10
metacluster_1/pattern_8 # seqlets: 993 SequenceContrib ScoresHyp_Contrib Scores
Rfx2, Rfx3, Rfx1, Rfx4, Rfx6, Rfx7
metacluster_1/pattern_9 # seqlets: 962 SequenceContrib ScoresHyp_Contrib Scores
Tead4, Tead2, Tead1
metacluster_1/pattern_10 # seqlets: 682 SequenceContrib ScoresHyp_Contrib Scores
Yy1, Taf1, Zfp42
metacluster_1/pattern_11 # seqlets: 601 SequenceContrib ScoresHyp_Contrib Scores
Usf1, Usf2, Tfec, Tfeb, Tfe3, Mitf, Srebf1, Arntl, Clock, Bhlhe40,

Mlx, Arnt, Npas2, Creb3l2, Tcfl5, Mycn, Max, Xbp1, Atf1, Bhlhe41, Myc,

Mlxip, Hlf, Dbp
metacluster_1/pattern_12 # seqlets: 524 SequenceContrib ScoresHyp_Contrib Scores
Sry, Sox17
metacluster_1/pattern_13 # seqlets: 468 SequenceContrib ScoresHyp_Contrib Scores
Esrrb, Nr5a2, Rarg, Esrra, Esrrg, Rara, Nr5a1, Rxrg, Rxra, Hnf4a,

Hnf4g, Nr2c2, Rxrb, Nr2f6, Nr4a2
metacluster_1/pattern_14 # seqlets: 454 SequenceContrib ScoresHyp_Contrib Scores
Zfp143, Thap11, Tbx2
metacluster_1/pattern_15 # seqlets: 434 SequenceContrib ScoresHyp_Contrib Scores
metacluster_1/pattern_16 # seqlets: 288 SequenceContrib ScoresHyp_Contrib Scores
Zic2, Zic3
metacluster_1/pattern_17 # seqlets: 263 SequenceContrib ScoresHyp_Contrib Scores
Bach2, Nfe2, Nfe2l2, Bach1, Mafk, Mafa, Jun, Mafg, Mafb, Maff,

Atf3, Fosl2, Fosb, Junb, Maf, Fosl1, Jund, Batf, Fos, Jdp2
metacluster_1/pattern_18 # seqlets: 247 SequenceContrib ScoresHyp_Contrib Scores
Creb1, Atf2, Atf7, Crem, Creb5, Nfil3, Nr1h4, Tef
metacluster_1/pattern_19 # seqlets: 238 SequenceContrib ScoresHyp_Contrib Scores
Vsx2, Mnx1, Lhx2, Lhx9, Nobox, Prrx2, Lhx3, Msx3, Esx1, Hand1,

Rhox6, Msx2, Arx, Pax6, Lbx2, Alx1, Gbx2, Pou1f1, Prrx1, Lhx1, Shox2,

Alx4, Hoxa3, En1, Lhx5, Otp, Gbx1, Lhx4, Alx3, Emx2, Hmx2, Uncx,

Nkx1-1, Hoxd3, Lhx6, En2, Evx1, Barhl2, Pou3f4, Prop1, Gsx2, Lhx8, Sebox,

Hoxd1
metacluster_1/pattern_20 # seqlets: 158 SequenceContrib ScoresHyp_Contrib Scores
metacluster_1/pattern_21 # seqlets: 98 SequenceContrib ScoresHyp_Contrib Scores
Tcfcp2l1, Grhl2
metacluster_1/pattern_22 # seqlets: 85 SequenceContrib ScoresHyp_Contrib Scores
Six2, Six1, Six4
metacluster_1/pattern_23 # seqlets: 70 SequenceContrib ScoresHyp_Contrib Scores
Rest
metacluster_1/pattern_24 # seqlets: 56 SequenceContrib ScoresHyp_Contrib Scores
metacluster_1/pattern_25 # seqlets: 43 SequenceContrib ScoresHyp_Contrib Scores
metacluster_1/pattern_26 # seqlets: 41 SequenceContrib ScoresHyp_Contrib Scores
metacluster_1/pattern_27 # seqlets: 40 SequenceContrib ScoresHyp_Contrib Scores
metacluster_1/pattern_28 # seqlets: 39 SequenceContrib ScoresHyp_Contrib Scores
Nfia, Nfib
Click here for Motifs by TF-MoDISco: #209
TF NamePattern(s)
Sp2
Pattern NameModiscoSignificance
metacluster_1/pattern_00.000119161
metacluster_1/pattern_70.00303662
metacluster_1/pattern_180.012820400000000001
Klf5
Pattern NameModiscoSignificance
metacluster_1/pattern_00.000119161
metacluster_1/pattern_70.0247419
Klf15
Pattern NameModiscoSignificance
metacluster_1/pattern_00.000119161
metacluster_1/pattern_70.010275
Sp3
Pattern NameModiscoSignificance
metacluster_1/pattern_00.000119161
metacluster_1/pattern_70.00137251
Wt1
Pattern NameModiscoSignificance
metacluster_1/pattern_00.000119161
metacluster_1/pattern_70.00260512
Klf4
Pattern NameModiscoSignificance
metacluster_1/pattern_00.0018854
metacluster_1/pattern_70.0410677
Zfp281
Pattern NameModiscoSignificance
metacluster_1/pattern_00.0122846
metacluster_1/pattern_70.042896699999999996
Maz
Pattern NameModiscoSignificance
metacluster_1/pattern_00.000141939
metacluster_1/pattern_70.00239052
Sp5
Pattern NameModiscoSignificance
metacluster_1/pattern_00.000193053
metacluster_1/pattern_70.00239052
Klf1
Pattern NameModiscoSignificance
metacluster_1/pattern_00.036925400000000004
metacluster_1/pattern_70.056311900000000005
Sp1
Pattern NameModiscoSignificance
metacluster_1/pattern_00.000283626
metacluster_1/pattern_70.022603400000000003
metacluster_1/pattern_180.0484171
Sp4
Pattern NameModiscoSignificance
metacluster_1/pattern_00.00323953
metacluster_1/pattern_70.0357486
Klf6
Pattern NameModiscoSignificance
metacluster_1/pattern_00.000262755
metacluster_1/pattern_70.0118474
Klf7
Pattern NameModiscoSignificance
metacluster_1/pattern_00.00132928
metacluster_1/pattern_70.026291200000000004
Zbtb17
Pattern NameModiscoSignificance
metacluster_1/pattern_00.00132928
metacluster_1/pattern_70.00024109900000000002
Zfx
Pattern NameModiscoSignificance
metacluster_1/pattern_00.0178071
metacluster_1/pattern_180.050772000000000005
Egr1
Pattern NameModiscoSignificance
metacluster_1/pattern_00.023202200000000003
metacluster_1/pattern_70.026915300000000003
Klf3
Pattern NameModiscoSignificance
metacluster_1/pattern_00.00165683
metacluster_1/pattern_70.00980815
Sall4
Pattern NameModiscoSignificance
metacluster_1/pattern_00.00183521
metacluster_1/pattern_70.0224272
Klf8
Pattern NameModiscoSignificance
metacluster_1/pattern_00.00187363
metacluster_1/pattern_70.027579900000000004
Klf12
Pattern NameModiscoSignificance
metacluster_1/pattern_00.0018854
metacluster_1/pattern_70.0410677
E2f4
Pattern NameModiscoSignificance
metacluster_1/pattern_00.00234167
metacluster_1/pattern_70.0118474
Egr2
Pattern NameModiscoSignificance
metacluster_1/pattern_00.00360883
metacluster_1/pattern_70.0224272
Zfp740
Pattern NameModiscoSignificance
metacluster_1/pattern_00.0381004
metacluster_1/pattern_70.031604900000000005
Srebf2
Pattern NameModiscoSignificance
metacluster_1/pattern_00.0168623
metacluster_1/pattern_110.00861168
Tfap2c
Pattern NameModiscoSignificance
metacluster_1/pattern_00.0200751
Rela
Pattern NameModiscoSignificance
metacluster_1/pattern_00.0230102
E2f6
Pattern NameModiscoSignificance
metacluster_1/pattern_00.0230102
Gata1
Pattern NameModiscoSignificance
metacluster_1/pattern_00.0533707
Ctcf
Pattern NameModiscoSignificance
metacluster_1/pattern_11.02677e-09
metacluster_1/pattern_150.00844935
Ctcfl
Pattern NameModiscoSignificance
metacluster_1/pattern_19.34946e-10
Nfyb
Pattern NameModiscoSignificance
metacluster_1/pattern_25.45368e-10
Nfya
Pattern NameModiscoSignificance
metacluster_1/pattern_24.103e-08
Nfyc
Pattern NameModiscoSignificance
metacluster_1/pattern_23.1064800000000004e-07
Foxi1
Pattern NameModiscoSignificance
metacluster_1/pattern_21.94369e-05
Pbx3
Pattern NameModiscoSignificance
metacluster_1/pattern_20.00153709
Pou5f1
Pattern NameModiscoSignificance
metacluster_1/pattern_35.01682e-06
metacluster_1/pattern_190.033016199999999996
Nanog
Pattern NameModiscoSignificance
metacluster_1/pattern_32.87339e-09
metacluster_1/pattern_190.0226554
Sox2
Pattern NameModiscoSignificance
metacluster_1/pattern_33.52923e-06
metacluster_1/pattern_80.054895900000000004
metacluster_1/pattern_120.0430166
metacluster_1/pattern_190.0226554
Pou2f2
Pattern NameModiscoSignificance
metacluster_1/pattern_30.0547164
Lef1
Pattern NameModiscoSignificance
metacluster_1/pattern_30.039163699999999996
metacluster_1/pattern_190.025347900000000003
Sox30
Pattern NameModiscoSignificance
metacluster_1/pattern_30.0527568
metacluster_1/pattern_120.0430166
Sox14
Pattern NameModiscoSignificance
metacluster_1/pattern_30.058702
Nrf1
Pattern NameModiscoSignificance
metacluster_1/pattern_49.00733e-11
Gabpa
Pattern NameModiscoSignificance
metacluster_1/pattern_60.00328311
Elf1
Pattern NameModiscoSignificance
metacluster_1/pattern_68.30234e-08
Elk1
Pattern NameModiscoSignificance
metacluster_1/pattern_60.00328311
Fli1
Pattern NameModiscoSignificance
metacluster_1/pattern_60.004435100000000001
Elk4
Pattern NameModiscoSignificance
metacluster_1/pattern_60.00439958
Elk3
Pattern NameModiscoSignificance
metacluster_1/pattern_60.00328311
Erg
Pattern NameModiscoSignificance
metacluster_1/pattern_60.00439958
Ets1
Pattern NameModiscoSignificance
metacluster_1/pattern_60.0056138
Elf5
Pattern NameModiscoSignificance
metacluster_1/pattern_60.00993519
Etv5
Pattern NameModiscoSignificance
metacluster_1/pattern_60.00289461
Fev
Pattern NameModiscoSignificance
metacluster_1/pattern_60.00320609
Etv1
Pattern NameModiscoSignificance
metacluster_1/pattern_60.00350819
Etv4
Pattern NameModiscoSignificance
metacluster_1/pattern_60.004435100000000001
Elf2
Pattern NameModiscoSignificance
metacluster_1/pattern_60.0064843999999999995
Elf4
Pattern NameModiscoSignificance
metacluster_1/pattern_60.00361824
Etv6
Pattern NameModiscoSignificance
metacluster_1/pattern_60.00439958
Ehf
Pattern NameModiscoSignificance
metacluster_1/pattern_60.00552845
XP_911724.4
Pattern NameModiscoSignificance
metacluster_1/pattern_60.0056138
Etv3
Pattern NameModiscoSignificance
metacluster_1/pattern_60.0058892
Etv2
Pattern NameModiscoSignificance
metacluster_1/pattern_60.013558
Elf3
Pattern NameModiscoSignificance
metacluster_1/pattern_60.021403
Spi1
Pattern NameModiscoSignificance
metacluster_1/pattern_60.019090299999999998
Spdef
Pattern NameModiscoSignificance
metacluster_1/pattern_60.028745499999999997
Stat3
Pattern NameModiscoSignificance
metacluster_1/pattern_60.0533429
E2f1
Pattern NameModiscoSignificance
metacluster_1/pattern_70.027579900000000004
Ptf1a
Pattern NameModiscoSignificance
metacluster_1/pattern_70.0410677
Zscan10
Pattern NameModiscoSignificance
metacluster_1/pattern_70.0548703
Rfx2
Pattern NameModiscoSignificance
metacluster_1/pattern_80.027512900000000003
Rfx3
Pattern NameModiscoSignificance
metacluster_1/pattern_80.00397921
Rfx1
Pattern NameModiscoSignificance
metacluster_1/pattern_89.00413e-07
metacluster_1/pattern_180.04718030000000001
Rfx4
Pattern NameModiscoSignificance
metacluster_1/pattern_85.87933e-05
Rfx6
Pattern NameModiscoSignificance
metacluster_1/pattern_87.26414e-05
Rfx7
Pattern NameModiscoSignificance
metacluster_1/pattern_80.00160188
Tead4
Pattern NameModiscoSignificance
metacluster_1/pattern_90.0005604609999999999
Tead2
Pattern NameModiscoSignificance
metacluster_1/pattern_90.00165477
Tead1
Pattern NameModiscoSignificance
metacluster_1/pattern_90.00484511
Yy1
Pattern NameModiscoSignificance
metacluster_1/pattern_104.78475e-06
Taf1
Pattern NameModiscoSignificance
metacluster_1/pattern_104.78475e-06
Zfp42
Pattern NameModiscoSignificance
metacluster_1/pattern_100.00802835
Usf1
Pattern NameModiscoSignificance
metacluster_1/pattern_110.00248042
metacluster_1/pattern_180.0115684
Usf2
Pattern NameModiscoSignificance
metacluster_1/pattern_110.00056073
metacluster_1/pattern_185.9367600000000004e-05
Tfec
Pattern NameModiscoSignificance
metacluster_1/pattern_110.000621841
Tfeb
Pattern NameModiscoSignificance
metacluster_1/pattern_110.000817595
Tfe3
Pattern NameModiscoSignificance
metacluster_1/pattern_110.0007589439999999999
Mitf
Pattern NameModiscoSignificance
metacluster_1/pattern_110.00056073
Srebf1
Pattern NameModiscoSignificance
metacluster_1/pattern_110.00370175
Arntl
Pattern NameModiscoSignificance
metacluster_1/pattern_110.0103847
Clock
Pattern NameModiscoSignificance
metacluster_1/pattern_110.030794
Bhlhe40
Pattern NameModiscoSignificance
metacluster_1/pattern_110.024819400000000002
Mlx
Pattern NameModiscoSignificance
metacluster_1/pattern_110.00939876
Arnt
Pattern NameModiscoSignificance
metacluster_1/pattern_110.0357978
Npas2
Pattern NameModiscoSignificance
metacluster_1/pattern_110.0478085
Creb3l2
Pattern NameModiscoSignificance
metacluster_1/pattern_110.0234422
Tcfl5
Pattern NameModiscoSignificance
metacluster_1/pattern_110.00724237
Mycn
Pattern NameModiscoSignificance
metacluster_1/pattern_110.0234422
Max
Pattern NameModiscoSignificance
metacluster_1/pattern_110.024819400000000002
Xbp1
Pattern NameModiscoSignificance
metacluster_1/pattern_110.0234422
Atf1
Pattern NameModiscoSignificance
metacluster_1/pattern_110.0289068
metacluster_1/pattern_180.0207691
Bhlhe41
Pattern NameModiscoSignificance
metacluster_1/pattern_110.030794
Myc
Pattern NameModiscoSignificance
metacluster_1/pattern_110.0478085
Mlxip
Pattern NameModiscoSignificance
metacluster_1/pattern_110.0448798
Hlf
Pattern NameModiscoSignificance
metacluster_1/pattern_110.0508336
metacluster_1/pattern_180.0296277
Dbp
Pattern NameModiscoSignificance
metacluster_1/pattern_110.05572080000000001
Sry
Pattern NameModiscoSignificance
metacluster_1/pattern_120.0430166
Sox17
Pattern NameModiscoSignificance
metacluster_1/pattern_120.0444414
Esrrb
Pattern NameModiscoSignificance
metacluster_1/pattern_130.00484486
Nr5a2
Pattern NameModiscoSignificance
metacluster_1/pattern_130.00157595
Rarg
Pattern NameModiscoSignificance
metacluster_1/pattern_139.9462e-05
Esrra
Pattern NameModiscoSignificance
metacluster_1/pattern_130.00599943
Esrrg
Pattern NameModiscoSignificance
metacluster_1/pattern_130.00413907
Rara
Pattern NameModiscoSignificance
metacluster_1/pattern_130.00176915
Nr5a1
Pattern NameModiscoSignificance
metacluster_1/pattern_130.00202159
Rxrg
Pattern NameModiscoSignificance
metacluster_1/pattern_130.00257074
Rxra
Pattern NameModiscoSignificance
metacluster_1/pattern_130.015365100000000001
Hnf4a
Pattern NameModiscoSignificance
metacluster_1/pattern_130.016527700000000003
Hnf4g
Pattern NameModiscoSignificance
metacluster_1/pattern_130.00684787
Nr2c2
Pattern NameModiscoSignificance
metacluster_1/pattern_130.0121886
Rxrb
Pattern NameModiscoSignificance
metacluster_1/pattern_130.0158074
Nr2f6
Pattern NameModiscoSignificance
metacluster_1/pattern_130.025706299999999998
Nr4a2
Pattern NameModiscoSignificance
metacluster_1/pattern_130.04683180000000001
Zfp143
Pattern NameModiscoSignificance
metacluster_1/pattern_141.00621e-21
Thap11
Pattern NameModiscoSignificance
metacluster_1/pattern_141.34104e-19
Tbx2
Pattern NameModiscoSignificance
metacluster_1/pattern_142.75607e-13
Zic2
Pattern NameModiscoSignificance
metacluster_1/pattern_164.8958699999999996e-05
Zic3
Pattern NameModiscoSignificance
metacluster_1/pattern_160.00107242
Bach2
Pattern NameModiscoSignificance
metacluster_1/pattern_173.38683e-09
Nfe2
Pattern NameModiscoSignificance
metacluster_1/pattern_174.07592e-08
Nfe2l2
Pattern NameModiscoSignificance
metacluster_1/pattern_179.035689999999999e-08
Bach1
Pattern NameModiscoSignificance
metacluster_1/pattern_171.4862399999999999e-06
Mafk
Pattern NameModiscoSignificance
metacluster_1/pattern_170.0008444889999999999
Mafa
Pattern NameModiscoSignificance
metacluster_1/pattern_170.000519866
Jun
Pattern NameModiscoSignificance
metacluster_1/pattern_170.0008444889999999999
metacluster_1/pattern_180.04718030000000001
Mafg
Pattern NameModiscoSignificance
metacluster_1/pattern_170.00188328
Mafb
Pattern NameModiscoSignificance
metacluster_1/pattern_170.0021582
Maff
Pattern NameModiscoSignificance
metacluster_1/pattern_170.0021582
Atf3
Pattern NameModiscoSignificance
metacluster_1/pattern_170.0021582
metacluster_1/pattern_180.00867635
Fosl2
Pattern NameModiscoSignificance
metacluster_1/pattern_170.00420132
metacluster_1/pattern_180.014093000000000001
Fosb
Pattern NameModiscoSignificance
metacluster_1/pattern_170.00277257
Junb
Pattern NameModiscoSignificance
metacluster_1/pattern_170.00296721
Maf
Pattern NameModiscoSignificance
metacluster_1/pattern_170.00296721
Fosl1
Pattern NameModiscoSignificance
metacluster_1/pattern_170.00358431
Jund
Pattern NameModiscoSignificance
metacluster_1/pattern_170.0546552
Batf
Pattern NameModiscoSignificance
metacluster_1/pattern_170.0412934
Fos
Pattern NameModiscoSignificance
metacluster_1/pattern_170.00591118
Jdp2
Pattern NameModiscoSignificance
metacluster_1/pattern_170.00950299
metacluster_1/pattern_180.0008072139999999999
Creb1
Pattern NameModiscoSignificance
metacluster_1/pattern_180.00371293
Atf2
Pattern NameModiscoSignificance
metacluster_1/pattern_180.000698753
Atf7
Pattern NameModiscoSignificance
metacluster_1/pattern_180.000104239
Crem
Pattern NameModiscoSignificance
metacluster_1/pattern_180.00632069
Creb5
Pattern NameModiscoSignificance
metacluster_1/pattern_180.0007962430000000001
Nfil3
Pattern NameModiscoSignificance
metacluster_1/pattern_180.0188073
Nr1h4
Pattern NameModiscoSignificance
metacluster_1/pattern_180.0379188
Tef
Pattern NameModiscoSignificance
metacluster_1/pattern_180.0391449
Vsx2
Pattern NameModiscoSignificance
metacluster_1/pattern_190.025347900000000003
Mnx1
Pattern NameModiscoSignificance
metacluster_1/pattern_190.025347900000000003
Lhx2
Pattern NameModiscoSignificance
metacluster_1/pattern_190.05354640000000001
Lhx9
Pattern NameModiscoSignificance
metacluster_1/pattern_190.025858099999999995
Nobox
Pattern NameModiscoSignificance
metacluster_1/pattern_190.05144259999999999
Prrx2
Pattern NameModiscoSignificance
metacluster_1/pattern_190.0351718
Lhx3
Pattern NameModiscoSignificance
metacluster_1/pattern_190.0586566
Msx3
Pattern NameModiscoSignificance
metacluster_1/pattern_190.033016199999999996
Esx1
Pattern NameModiscoSignificance
metacluster_1/pattern_190.033016199999999996
Hand1
Pattern NameModiscoSignificance
metacluster_1/pattern_190.033016199999999996
Rhox6
Pattern NameModiscoSignificance
metacluster_1/pattern_190.033016199999999996
Msx2
Pattern NameModiscoSignificance
metacluster_1/pattern_190.033016199999999996
Arx
Pattern NameModiscoSignificance
metacluster_1/pattern_190.033016199999999996
Pax6
Pattern NameModiscoSignificance
metacluster_1/pattern_190.033016199999999996
Lbx2
Pattern NameModiscoSignificance
metacluster_1/pattern_190.0332122
Alx1
Pattern NameModiscoSignificance
metacluster_1/pattern_190.03993119999999999
Gbx2
Pattern NameModiscoSignificance
metacluster_1/pattern_190.0332122
Pou1f1
Pattern NameModiscoSignificance
metacluster_1/pattern_190.0341902
Prrx1
Pattern NameModiscoSignificance
metacluster_1/pattern_190.0341902
Lhx1
Pattern NameModiscoSignificance
metacluster_1/pattern_190.0351718
Shox2
Pattern NameModiscoSignificance
metacluster_1/pattern_190.0351718
Alx4
Pattern NameModiscoSignificance
metacluster_1/pattern_190.0351718
Hoxa3
Pattern NameModiscoSignificance
metacluster_1/pattern_190.0364348
En1
Pattern NameModiscoSignificance
metacluster_1/pattern_190.037242199999999996
Lhx5
Pattern NameModiscoSignificance
metacluster_1/pattern_190.0414254
Otp
Pattern NameModiscoSignificance
metacluster_1/pattern_190.04163719999999999
Gbx1
Pattern NameModiscoSignificance
metacluster_1/pattern_190.04163719999999999
Lhx4
Pattern NameModiscoSignificance
metacluster_1/pattern_190.04163719999999999
Alx3
Pattern NameModiscoSignificance
metacluster_1/pattern_190.0456924
Emx2
Pattern NameModiscoSignificance
metacluster_1/pattern_190.048668699999999995
Hmx2
Pattern NameModiscoSignificance
metacluster_1/pattern_190.0496519
Uncx
Pattern NameModiscoSignificance
metacluster_1/pattern_190.0496519
Nkx1-1
Pattern NameModiscoSignificance
metacluster_1/pattern_190.05144259999999999
Hoxd3
Pattern NameModiscoSignificance
metacluster_1/pattern_190.05144259999999999
Lhx6
Pattern NameModiscoSignificance
metacluster_1/pattern_190.05144259999999999
En2
Pattern NameModiscoSignificance
metacluster_1/pattern_190.0531252
Evx1
Pattern NameModiscoSignificance
metacluster_1/pattern_190.0531252
Barhl2
Pattern NameModiscoSignificance
metacluster_1/pattern_190.0531252
Pou3f4
Pattern NameModiscoSignificance
metacluster_1/pattern_190.05354640000000001
Prop1
Pattern NameModiscoSignificance
metacluster_1/pattern_190.05354640000000001
Gsx2
Pattern NameModiscoSignificance
metacluster_1/pattern_190.05354640000000001
Lhx8
Pattern NameModiscoSignificance
metacluster_1/pattern_190.05354640000000001
Sebox
Pattern NameModiscoSignificance
metacluster_1/pattern_190.05457530000000001
Hoxd1
Pattern NameModiscoSignificance
metacluster_1/pattern_190.0573293
Tcfcp2l1
Pattern NameModiscoSignificance
metacluster_1/pattern_210.0015879000000000002
Grhl2
Pattern NameModiscoSignificance
metacluster_1/pattern_210.0028166
Six2
Pattern NameModiscoSignificance
metacluster_1/pattern_225.50756e-08
Six1
Pattern NameModiscoSignificance
metacluster_1/pattern_222.17871e-05
Six4
Pattern NameModiscoSignificance
metacluster_1/pattern_227.08555e-05
Rest
Pattern NameModiscoSignificance
metacluster_1/pattern_231.57909e-14
metacluster_1/pattern_250.00072303
Nfia
Pattern NameModiscoSignificance
metacluster_1/pattern_280.000114801
Nfib
Pattern NameModiscoSignificance
metacluster_1/pattern_280.00027058
In [6]:
display_paiwise_pattern_comparison(data_name, modisco_root, homer_root)
Number of CISBP TFs obtained by TF-MoDISco and Homer
Shared TFs between TF-MoDISco and Homer: #85
TF NameModiscoHomer
Ctcfl
Pattern NameModiscoSignificance
metacluster_1/pattern_19.34946e-10
Pattern NameHomerSignificance
motif1.motif0.000375136
Rfx7
Pattern NameModiscoSignificance
metacluster_1/pattern_80.00160188
Pattern NameHomerSignificance
motif23.motif0.0127337
Atf7
Pattern NameModiscoSignificance
metacluster_1/pattern_180.000104239
Pattern NameHomerSignificance
motif17.motif0.046310000000000004
Mitf
Pattern NameModiscoSignificance
metacluster_1/pattern_110.00056073
Pattern NameHomerSignificance
motif17.motif0.00530066
Ctcf
Pattern NameModiscoSignificance
metacluster_1/pattern_11.02677e-09
metacluster_1/pattern_150.00844935
Pattern NameHomerSignificance
motif1.motif4.77164e-05
Klf7
Pattern NameModiscoSignificance
metacluster_1/pattern_00.00132928
metacluster_1/pattern_70.026291200000000004
Pattern NameHomerSignificance
motif2.motif0.00010031299999999999
Bhlhe40
Pattern NameModiscoSignificance
metacluster_1/pattern_110.024819400000000002
Pattern NameHomerSignificance
motif17.motif0.00978365
Klf4
Pattern NameModiscoSignificance
metacluster_1/pattern_00.0018854
metacluster_1/pattern_70.0410677
Pattern NameHomerSignificance
motif2.motif0.00412374
Nr5a2
Pattern NameModiscoSignificance
metacluster_1/pattern_130.00157595
Pattern NameHomerSignificance
motif22.motif0.031004000000000004
Klf3
Pattern NameModiscoSignificance
metacluster_1/pattern_00.00165683
metacluster_1/pattern_70.00980815
Pattern NameHomerSignificance
motif2.motif1.19356e-05
Nr5a1
Pattern NameModiscoSignificance
metacluster_1/pattern_130.00202159
Pattern NameHomerSignificance
motif22.motif0.00284012
Usf1
Pattern NameModiscoSignificance
metacluster_1/pattern_110.00248042
metacluster_1/pattern_180.0115684
Pattern NameHomerSignificance
motif17.motif0.0140862
Klf8
Pattern NameModiscoSignificance
metacluster_1/pattern_00.00187363
metacluster_1/pattern_70.027579900000000004
Pattern NameHomerSignificance
motif2.motif0.000127344
Nanog
Pattern NameModiscoSignificance
metacluster_1/pattern_32.87339e-09
metacluster_1/pattern_190.0226554
Pattern NameHomerSignificance
motif9.motif1.1418399999999999e-05
Esrrb
Pattern NameModiscoSignificance
metacluster_1/pattern_130.00484486
Pattern NameHomerSignificance
motif22.motif0.0298404
Rfx3
Pattern NameModiscoSignificance
metacluster_1/pattern_80.00397921
Pattern NameHomerSignificance
motif23.motif0.0326068
Elk1
Pattern NameModiscoSignificance
metacluster_1/pattern_60.00328311
Pattern NameHomerSignificance
motif7.motif0.054182299999999996
Nfyc
Pattern NameModiscoSignificance
metacluster_1/pattern_23.1064800000000004e-07
Pattern NameHomerSignificance
motif5.motif4.0438999999999995e-06
Fli1
Pattern NameModiscoSignificance
metacluster_1/pattern_60.004435100000000001
Pattern NameHomerSignificance
motif7.motif0.051369399999999996
XP_911724.4
Pattern NameModiscoSignificance
metacluster_1/pattern_60.0056138
Pattern NameHomerSignificance
motif7.motif0.051369399999999996
Tcfl5
Pattern NameModiscoSignificance
metacluster_1/pattern_110.00724237
Pattern NameHomerSignificance
motif17.motif0.024940200000000003
E2f4
Pattern NameModiscoSignificance
metacluster_1/pattern_00.00234167
metacluster_1/pattern_70.0118474
Pattern NameHomerSignificance
motif2.motif0.00329641
Esrra
Pattern NameModiscoSignificance
metacluster_1/pattern_130.00599943
Pattern NameHomerSignificance
motif22.motif0.011923999999999999
Rfx4
Pattern NameModiscoSignificance
metacluster_1/pattern_85.87933e-05
Pattern NameHomerSignificance
motif23.motif0.000162359
Etv1
Pattern NameModiscoSignificance
metacluster_1/pattern_60.00350819
Pattern NameHomerSignificance
motif7.motif0.051369399999999996
Zfp143
Pattern NameModiscoSignificance
metacluster_1/pattern_141.00621e-21
Pattern NameHomerSignificance
motif11.motif0.000979934
Tbx2
Pattern NameModiscoSignificance
metacluster_1/pattern_142.75607e-13
Pattern NameHomerSignificance
motif11.motif0.000333833
Mycn
Pattern NameModiscoSignificance
metacluster_1/pattern_110.0234422
Pattern NameHomerSignificance
motif17.motif0.043205099999999996
Ehf
Pattern NameModiscoSignificance
metacluster_1/pattern_60.00552845
Pattern NameHomerSignificance
motif7.motif0.05688819999999999
Rarg
Pattern NameModiscoSignificance
metacluster_1/pattern_139.9462e-05
Pattern NameHomerSignificance
motif22.motif0.00132819
Etv5
Pattern NameModiscoSignificance
metacluster_1/pattern_60.00289461
Pattern NameHomerSignificance
motif7.motif0.051369399999999996
Egr1
Pattern NameModiscoSignificance
metacluster_1/pattern_00.023202200000000003
metacluster_1/pattern_70.026915300000000003
Pattern NameHomerSignificance
motif2.motif0.014486500000000001
Srebf1
Pattern NameModiscoSignificance
metacluster_1/pattern_110.00370175
Pattern NameHomerSignificance
motif17.motif0.0123321
Crem
Pattern NameModiscoSignificance
metacluster_1/pattern_180.00632069
Pattern NameHomerSignificance
motif17.motif0.00385326
Rxra
Pattern NameModiscoSignificance
metacluster_1/pattern_130.015365100000000001
Pattern NameHomerSignificance
motif22.motif0.000371962
Etv6
Pattern NameModiscoSignificance
metacluster_1/pattern_60.00439958
Pattern NameHomerSignificance
motif7.motif0.051369399999999996
Elk3
Pattern NameModiscoSignificance
metacluster_1/pattern_60.00328311
Pattern NameHomerSignificance
motif7.motif0.0520842
Elf2
Pattern NameModiscoSignificance
metacluster_1/pattern_60.0064843999999999995
Pattern NameHomerSignificance
motif7.motif0.0520842
Rxrg
Pattern NameModiscoSignificance
metacluster_1/pattern_130.00257074
Pattern NameHomerSignificance
motif22.motif0.000334837
Rfx2
Pattern NameModiscoSignificance
metacluster_1/pattern_80.027512900000000003
Pattern NameHomerSignificance
motif23.motif1.75443e-05
Ets1
Pattern NameModiscoSignificance
metacluster_1/pattern_60.0056138
Pattern NameHomerSignificance
motif7.motif0.051369399999999996
Tfeb
Pattern NameModiscoSignificance
metacluster_1/pattern_110.000817595
Pattern NameHomerSignificance
motif17.motif0.0035543
Etv4
Pattern NameModiscoSignificance
metacluster_1/pattern_60.004435100000000001
Pattern NameHomerSignificance
motif7.motif0.051369399999999996
Sox2
Pattern NameModiscoSignificance
metacluster_1/pattern_33.52923e-06
metacluster_1/pattern_80.054895900000000004
metacluster_1/pattern_120.0430166
metacluster_1/pattern_190.0226554
Pattern NameHomerSignificance
motif9.motif1.5776e-05
Nfyb
Pattern NameModiscoSignificance
metacluster_1/pattern_25.45368e-10
Pattern NameHomerSignificance
motif5.motif8.95455e-08
Klf1
Pattern NameModiscoSignificance
metacluster_1/pattern_00.036925400000000004
metacluster_1/pattern_70.056311900000000005
Pattern NameHomerSignificance
motif2.motif0.000855567
Sp1
Pattern NameModiscoSignificance
metacluster_1/pattern_00.000283626
metacluster_1/pattern_70.022603400000000003
metacluster_1/pattern_180.0484171
Pattern NameHomerSignificance
motif2.motif0.033798
Sp2
Pattern NameModiscoSignificance
metacluster_1/pattern_00.000119161
metacluster_1/pattern_70.00303662
metacluster_1/pattern_180.012820400000000001
Pattern NameHomerSignificance
motif2.motif0.000855567
Sp3
Pattern NameModiscoSignificance
metacluster_1/pattern_00.000119161
metacluster_1/pattern_70.00137251
Pattern NameHomerSignificance
motif2.motif0.00329641
Tfe3
Pattern NameModiscoSignificance
metacluster_1/pattern_110.0007589439999999999
Pattern NameHomerSignificance
motif17.motif0.00791741
Nrf1
Pattern NameModiscoSignificance
metacluster_1/pattern_49.00733e-11
Pattern NameHomerSignificance
motif10.motif6.43019e-05
Thap11
Pattern NameModiscoSignificance
metacluster_1/pattern_141.34104e-19
Pattern NameHomerSignificance
motif11.motif0.00201808
Erg
Pattern NameModiscoSignificance
metacluster_1/pattern_60.00439958
Pattern NameHomerSignificance
motif7.motif0.051369399999999996
Pbx3
Pattern NameModiscoSignificance
metacluster_1/pattern_20.00153709
Pattern NameHomerSignificance
motif5.motif0.00044322
Creb1
Pattern NameModiscoSignificance
metacluster_1/pattern_180.00371293
Pattern NameHomerSignificance
motif17.motif0.0254962
Klf12
Pattern NameModiscoSignificance
metacluster_1/pattern_00.0018854
metacluster_1/pattern_70.0410677
Pattern NameHomerSignificance
motif2.motif0.000648997
Elk4
Pattern NameModiscoSignificance
metacluster_1/pattern_60.00439958
Pattern NameHomerSignificance
motif7.motif0.051369399999999996
Bhlhe41
Pattern NameModiscoSignificance
metacluster_1/pattern_110.030794
Pattern NameHomerSignificance
motif17.motif0.00791741
Etv3
Pattern NameModiscoSignificance
metacluster_1/pattern_60.0058892
Pattern NameHomerSignificance
motif7.motif0.051369399999999996
Rara
Pattern NameModiscoSignificance
metacluster_1/pattern_130.00176915
Pattern NameHomerSignificance
motif22.motif1.37287e-05
Creb5
Pattern NameModiscoSignificance
metacluster_1/pattern_180.0007962430000000001
Pattern NameHomerSignificance
motif17.motif0.014513299999999998
Clock
Pattern NameModiscoSignificance
metacluster_1/pattern_110.030794
Pattern NameHomerSignificance
motif17.motif0.00515905
Srebf2
Pattern NameModiscoSignificance
metacluster_1/pattern_00.0168623
metacluster_1/pattern_110.00861168
Pattern NameHomerSignificance
motif17.motif0.00100277
Jdp2
Pattern NameModiscoSignificance
metacluster_1/pattern_170.00950299
metacluster_1/pattern_180.0008072139999999999
Pattern NameHomerSignificance
motif17.motif0.0439849
Usf2
Pattern NameModiscoSignificance
metacluster_1/pattern_110.00056073
metacluster_1/pattern_185.9367600000000004e-05
Pattern NameHomerSignificance
motif17.motif0.0202472
Mlx
Pattern NameModiscoSignificance
metacluster_1/pattern_110.00939876
Pattern NameHomerSignificance
motif17.motif0.043205099999999996
Rfx6
Pattern NameModiscoSignificance
metacluster_1/pattern_87.26414e-05
Pattern NameHomerSignificance
motif23.motif0.0204467
Pou5f1
Pattern NameModiscoSignificance
metacluster_1/pattern_35.01682e-06
metacluster_1/pattern_190.033016199999999996
Pattern NameHomerSignificance
motif9.motif3.12024e-05
Esrrg
Pattern NameModiscoSignificance
metacluster_1/pattern_130.00413907
Pattern NameHomerSignificance
motif22.motif0.033596499999999994
Tfec
Pattern NameModiscoSignificance
metacluster_1/pattern_110.000621841
Pattern NameHomerSignificance
motif17.motif0.00918148
Npas2
Pattern NameModiscoSignificance
metacluster_1/pattern_110.0478085
Pattern NameHomerSignificance
motif17.motif0.0257497
Arnt
Pattern NameModiscoSignificance
metacluster_1/pattern_110.0357978
Pattern NameHomerSignificance
motif17.motif0.0395652
Nfya
Pattern NameModiscoSignificance
metacluster_1/pattern_24.103e-08
Pattern NameHomerSignificance
motif5.motif3.50789e-06
Foxi1
Pattern NameModiscoSignificance
metacluster_1/pattern_21.94369e-05
Pattern NameHomerSignificance
motif5.motif0.00043305599999999997
Rfx1
Pattern NameModiscoSignificance
metacluster_1/pattern_89.00413e-07
metacluster_1/pattern_180.04718030000000001
Pattern NameHomerSignificance
motif23.motif5.22605e-08
Atf1
Pattern NameModiscoSignificance
metacluster_1/pattern_110.0289068
metacluster_1/pattern_180.0207691
Pattern NameHomerSignificance
motif17.motif0.00376748
Pou2f2
Pattern NameModiscoSignificance
metacluster_1/pattern_30.0547164
Pattern NameHomerSignificance
motif9.motif0.013761099999999998
Gabpa
Pattern NameModiscoSignificance
metacluster_1/pattern_60.00328311
Pattern NameHomerSignificance
motif7.motif0.0520842
Atf2
Pattern NameModiscoSignificance
metacluster_1/pattern_180.000698753
Pattern NameHomerSignificance
motif17.motif0.0161585
Creb3l2
Pattern NameModiscoSignificance
metacluster_1/pattern_110.0234422
Pattern NameHomerSignificance
motif17.motif0.0364707
Arntl
Pattern NameModiscoSignificance
metacluster_1/pattern_110.0103847
Pattern NameHomerSignificance
motif17.motif0.029183999999999998
Klf5
Pattern NameModiscoSignificance
metacluster_1/pattern_00.000119161
metacluster_1/pattern_70.0247419
Pattern NameHomerSignificance
motif2.motif0.00329641
Sp4
Pattern NameModiscoSignificance
metacluster_1/pattern_00.00323953
metacluster_1/pattern_70.0357486
Pattern NameHomerSignificance
motif2.motif0.0477015
Elf4
Pattern NameModiscoSignificance
metacluster_1/pattern_60.00361824
Pattern NameHomerSignificance
motif7.motif0.054182299999999996
Klf6
Pattern NameModiscoSignificance
metacluster_1/pattern_00.000262755
metacluster_1/pattern_70.0118474
Pattern NameHomerSignificance
motif2.motif0.000195207
Unique TF-MoDISco TFs: #124
TF NameModiscoHomer
Sall4
Pattern NameModiscoSignificance
metacluster_1/pattern_00.00183521
metacluster_1/pattern_70.0224272
Absent
Lhx1
Pattern NameModiscoSignificance
metacluster_1/pattern_190.0351718
Absent
Rhox6
Pattern NameModiscoSignificance
metacluster_1/pattern_190.033016199999999996
Absent
Fos
Pattern NameModiscoSignificance
metacluster_1/pattern_170.00591118
Absent
Stat3
Pattern NameModiscoSignificance
metacluster_1/pattern_60.0533429
Absent
Jun
Pattern NameModiscoSignificance
metacluster_1/pattern_170.0008444889999999999
metacluster_1/pattern_180.04718030000000001
Absent
Prrx1
Pattern NameModiscoSignificance
metacluster_1/pattern_190.0341902
Absent
Pou1f1
Pattern NameModiscoSignificance
metacluster_1/pattern_190.0341902
Absent
Alx3
Pattern NameModiscoSignificance
metacluster_1/pattern_190.0456924
Absent
Rest
Pattern NameModiscoSignificance
metacluster_1/pattern_231.57909e-14
metacluster_1/pattern_250.00072303
Absent
Hlf
Pattern NameModiscoSignificance
metacluster_1/pattern_110.0508336
metacluster_1/pattern_180.0296277
Absent
Alx4
Pattern NameModiscoSignificance
metacluster_1/pattern_190.0351718
Absent
Dbp
Pattern NameModiscoSignificance
metacluster_1/pattern_110.05572080000000001
Absent
Maf
Pattern NameModiscoSignificance
metacluster_1/pattern_170.00296721
Absent
Hnf4a
Pattern NameModiscoSignificance
metacluster_1/pattern_130.016527700000000003
Absent
Gbx2
Pattern NameModiscoSignificance
metacluster_1/pattern_190.0332122
Absent
Zic3
Pattern NameModiscoSignificance
metacluster_1/pattern_160.00107242
Absent
Alx1
Pattern NameModiscoSignificance
metacluster_1/pattern_190.03993119999999999
Absent
Fosl2
Pattern NameModiscoSignificance
metacluster_1/pattern_170.00420132
metacluster_1/pattern_180.014093000000000001
Absent
Myc
Pattern NameModiscoSignificance
metacluster_1/pattern_110.0478085
Absent
Rela
Pattern NameModiscoSignificance
metacluster_1/pattern_00.0230102
Absent
Six1
Pattern NameModiscoSignificance
metacluster_1/pattern_222.17871e-05
Absent
Xbp1
Pattern NameModiscoSignificance
metacluster_1/pattern_110.0234422
Absent
Lhx2
Pattern NameModiscoSignificance
metacluster_1/pattern_190.05354640000000001
Absent
Mlxip
Pattern NameModiscoSignificance
metacluster_1/pattern_110.0448798
Absent
Prrx2
Pattern NameModiscoSignificance
metacluster_1/pattern_190.0351718
Absent
Nr1h4
Pattern NameModiscoSignificance
metacluster_1/pattern_180.0379188
Absent
Nfia
Pattern NameModiscoSignificance
metacluster_1/pattern_280.000114801
Absent
Tead2
Pattern NameModiscoSignificance
metacluster_1/pattern_90.00165477
Absent
Pax6
Pattern NameModiscoSignificance
metacluster_1/pattern_190.033016199999999996
Absent
Lhx9
Pattern NameModiscoSignificance
metacluster_1/pattern_190.025858099999999995
Absent
Maz
Pattern NameModiscoSignificance
metacluster_1/pattern_00.000141939
metacluster_1/pattern_70.00239052
Absent
Mafk
Pattern NameModiscoSignificance
metacluster_1/pattern_170.0008444889999999999
Absent
Esx1
Pattern NameModiscoSignificance
metacluster_1/pattern_190.033016199999999996
Absent
Etv2
Pattern NameModiscoSignificance
metacluster_1/pattern_60.013558
Absent
Bach2
Pattern NameModiscoSignificance
metacluster_1/pattern_173.38683e-09
Absent
Lbx2
Pattern NameModiscoSignificance
metacluster_1/pattern_190.0332122
Absent
Zfp42
Pattern NameModiscoSignificance
metacluster_1/pattern_100.00802835
Absent
Gbx1
Pattern NameModiscoSignificance
metacluster_1/pattern_190.04163719999999999
Absent
Tfap2c
Pattern NameModiscoSignificance
metacluster_1/pattern_00.0200751
Absent
Lhx5
Pattern NameModiscoSignificance
metacluster_1/pattern_190.0414254
Absent
Six4
Pattern NameModiscoSignificance
metacluster_1/pattern_227.08555e-05
Absent
Emx2
Pattern NameModiscoSignificance
metacluster_1/pattern_190.048668699999999995
Absent
Six2
Pattern NameModiscoSignificance
metacluster_1/pattern_225.50756e-08
Absent
Arx
Pattern NameModiscoSignificance
metacluster_1/pattern_190.033016199999999996
Absent
Mafa
Pattern NameModiscoSignificance
metacluster_1/pattern_170.000519866
Absent
Gsx2
Pattern NameModiscoSignificance
metacluster_1/pattern_190.05354640000000001
Absent
Zfx
Pattern NameModiscoSignificance
metacluster_1/pattern_00.0178071
metacluster_1/pattern_180.050772000000000005
Absent
Wt1
Pattern NameModiscoSignificance
metacluster_1/pattern_00.000119161
metacluster_1/pattern_70.00260512
Absent
Hoxa3
Pattern NameModiscoSignificance
metacluster_1/pattern_190.0364348
Absent
Vsx2
Pattern NameModiscoSignificance
metacluster_1/pattern_190.025347900000000003
Absent
Msx2
Pattern NameModiscoSignificance
metacluster_1/pattern_190.033016199999999996
Absent
Prop1
Pattern NameModiscoSignificance
metacluster_1/pattern_190.05354640000000001
Absent
Lhx8
Pattern NameModiscoSignificance
metacluster_1/pattern_190.05354640000000001
Absent
Batf
Pattern NameModiscoSignificance
metacluster_1/pattern_170.0412934
Absent
Sox30
Pattern NameModiscoSignificance
metacluster_1/pattern_30.0527568
metacluster_1/pattern_120.0430166
Absent
Tcfcp2l1
Pattern NameModiscoSignificance
metacluster_1/pattern_210.0015879000000000002
Absent
Sry
Pattern NameModiscoSignificance
metacluster_1/pattern_120.0430166
Absent
Nobox
Pattern NameModiscoSignificance
metacluster_1/pattern_190.05144259999999999
Absent
Zscan10
Pattern NameModiscoSignificance
metacluster_1/pattern_70.0548703
Absent
Sox17
Pattern NameModiscoSignificance
metacluster_1/pattern_120.0444414
Absent
Nfil3
Pattern NameModiscoSignificance
metacluster_1/pattern_180.0188073
Absent
Rxrb
Pattern NameModiscoSignificance
metacluster_1/pattern_130.0158074
Absent
Nfe2l2
Pattern NameModiscoSignificance
metacluster_1/pattern_179.035689999999999e-08
Absent
Egr2
Pattern NameModiscoSignificance
metacluster_1/pattern_00.00360883
metacluster_1/pattern_70.0224272
Absent
Zfp740
Pattern NameModiscoSignificance
metacluster_1/pattern_00.0381004
metacluster_1/pattern_70.031604900000000005
Absent
Tead1
Pattern NameModiscoSignificance
metacluster_1/pattern_90.00484511
Absent
Nkx1-1
Pattern NameModiscoSignificance
metacluster_1/pattern_190.05144259999999999
Absent
Lhx3
Pattern NameModiscoSignificance
metacluster_1/pattern_190.0586566
Absent
Otp
Pattern NameModiscoSignificance
metacluster_1/pattern_190.04163719999999999
Absent
Maff
Pattern NameModiscoSignificance
metacluster_1/pattern_170.0021582
Absent
Elf3
Pattern NameModiscoSignificance
metacluster_1/pattern_60.021403
Absent
Gata1
Pattern NameModiscoSignificance
metacluster_1/pattern_00.0533707
Absent
Fev
Pattern NameModiscoSignificance
metacluster_1/pattern_60.00320609
Absent
Fosl1
Pattern NameModiscoSignificance
metacluster_1/pattern_170.00358431
Absent
Jund
Pattern NameModiscoSignificance
metacluster_1/pattern_170.0546552
Absent
Klf15
Pattern NameModiscoSignificance
metacluster_1/pattern_00.000119161
metacluster_1/pattern_70.010275
Absent
Sp5
Pattern NameModiscoSignificance
metacluster_1/pattern_00.000193053
metacluster_1/pattern_70.00239052
Absent
E2f6
Pattern NameModiscoSignificance
metacluster_1/pattern_00.0230102
Absent
Barhl2
Pattern NameModiscoSignificance
metacluster_1/pattern_190.0531252
Absent
Hmx2
Pattern NameModiscoSignificance
metacluster_1/pattern_190.0496519
Absent
En2
Pattern NameModiscoSignificance
metacluster_1/pattern_190.0531252
Absent
Ptf1a
Pattern NameModiscoSignificance
metacluster_1/pattern_70.0410677
Absent
Hnf4g
Pattern NameModiscoSignificance
metacluster_1/pattern_130.00684787
Absent
Mafb
Pattern NameModiscoSignificance
metacluster_1/pattern_170.0021582
Absent
Taf1
Pattern NameModiscoSignificance
metacluster_1/pattern_104.78475e-06
Absent
Pou3f4
Pattern NameModiscoSignificance
metacluster_1/pattern_190.05354640000000001
Absent
Nr2c2
Pattern NameModiscoSignificance
metacluster_1/pattern_130.0121886
Absent
Elf5
Pattern NameModiscoSignificance
metacluster_1/pattern_60.00993519
Absent
Elf1
Pattern NameModiscoSignificance
metacluster_1/pattern_68.30234e-08
Absent
Zbtb17
Pattern NameModiscoSignificance
metacluster_1/pattern_00.00132928
metacluster_1/pattern_70.00024109900000000002
Absent
Tef
Pattern NameModiscoSignificance
metacluster_1/pattern_180.0391449
Absent
Nr4a2
Pattern NameModiscoSignificance
metacluster_1/pattern_130.04683180000000001
Absent
Mnx1
Pattern NameModiscoSignificance
metacluster_1/pattern_190.025347900000000003
Absent
E2f1
Pattern NameModiscoSignificance
metacluster_1/pattern_70.027579900000000004
Absent
Nfe2
Pattern NameModiscoSignificance
metacluster_1/pattern_174.07592e-08
Absent
Tead4
Pattern NameModiscoSignificance
metacluster_1/pattern_90.0005604609999999999
Absent
Spi1
Pattern NameModiscoSignificance
metacluster_1/pattern_60.019090299999999998
Absent
Yy1
Pattern NameModiscoSignificance
metacluster_1/pattern_104.78475e-06
Absent
Fosb
Pattern NameModiscoSignificance
metacluster_1/pattern_170.00277257
Absent
Nr2f6
Pattern NameModiscoSignificance
metacluster_1/pattern_130.025706299999999998
Absent
Zfp281
Pattern NameModiscoSignificance
metacluster_1/pattern_00.0122846
metacluster_1/pattern_70.042896699999999996
Absent
Zic2
Pattern NameModiscoSignificance
metacluster_1/pattern_164.8958699999999996e-05
Absent
Spdef
Pattern NameModiscoSignificance
metacluster_1/pattern_60.028745499999999997
Absent
En1
Pattern NameModiscoSignificance
metacluster_1/pattern_190.037242199999999996
Absent
Grhl2
Pattern NameModiscoSignificance
metacluster_1/pattern_210.0028166
Absent
Nfib
Pattern NameModiscoSignificance
metacluster_1/pattern_280.00027058
Absent
Shox2
Pattern NameModiscoSignificance
metacluster_1/pattern_190.0351718
Absent
Sox14
Pattern NameModiscoSignificance
metacluster_1/pattern_30.058702
Absent
Lef1
Pattern NameModiscoSignificance
metacluster_1/pattern_30.039163699999999996
metacluster_1/pattern_190.025347900000000003
Absent
Atf3
Pattern NameModiscoSignificance
metacluster_1/pattern_170.0021582
metacluster_1/pattern_180.00867635
Absent
Evx1
Pattern NameModiscoSignificance
metacluster_1/pattern_190.0531252
Absent
Hoxd1
Pattern NameModiscoSignificance
metacluster_1/pattern_190.0573293
Absent
Sebox
Pattern NameModiscoSignificance
metacluster_1/pattern_190.05457530000000001
Absent
Mafg
Pattern NameModiscoSignificance
metacluster_1/pattern_170.00188328
Absent
Uncx
Pattern NameModiscoSignificance
metacluster_1/pattern_190.0496519
Absent
Lhx4
Pattern NameModiscoSignificance
metacluster_1/pattern_190.04163719999999999
Absent
Max
Pattern NameModiscoSignificance
metacluster_1/pattern_110.024819400000000002
Absent
Hoxd3
Pattern NameModiscoSignificance
metacluster_1/pattern_190.05144259999999999
Absent
Lhx6
Pattern NameModiscoSignificance
metacluster_1/pattern_190.05144259999999999
Absent
Msx3
Pattern NameModiscoSignificance
metacluster_1/pattern_190.033016199999999996
Absent
Bach1
Pattern NameModiscoSignificance
metacluster_1/pattern_171.4862399999999999e-06
Absent
Hand1
Pattern NameModiscoSignificance
metacluster_1/pattern_190.033016199999999996
Absent
Junb
Pattern NameModiscoSignificance
metacluster_1/pattern_170.00296721
Absent
Unique Homer TFs: #2
TF NameModiscoHomer
Zbtb33Absent
Pattern NameHomerSignificance
motif16.motif0.00161869
Nkx2-9Absent
Pattern NameHomerSignificance
motif22.motif0.033775