In [1]:
# Parameters
data_name = "SKN_EPTHL;A;GEO"
modisco_root = "/srv/scratch/msharmin/mouse_hem/with_tfd/full_mouse50/Naive_modisco2019"
tomtom_report_root = "http://mitra.stanford.edu/kundaje/msharmin/report/tomtom_outs/cells"
task_dir = "task_167-naivegw"
perf_file = "/srv/scratch/msharmin/mouse_hem/with_tfd/full_mouse50/fineFactorized/task_167-naivegw/NaiveauPRC.txt"
homer_root = "/srv/scratch/msharmin/mouse_hem/with_tfd/full_mouse50/Naive_scans"
reportfile = "/mnt/lab_data/kundaje/msharmin/annotations/filtering samples_MS2.xlsx"
sheetname = "filter23"
In [2]:
from matlas.reports import display_metadata
load data from labcluster
Using TensorFlow backend.
2019-08-30 19:17:45,279 [WARNING] git-lfs not installed
In [3]:
display_metadata(data_name, perf_file, reportfile, sheetname)
    Sample Information
    MetaData NameDescription
    Cell typeadult skin epithelia
    Cell GroupOther Tissues
    Experiment NameATAC
    Experiment GroupGEO
    Pipeline Output
    replicateNaïve overlap peaksIDR peaksTSS enrichment (< 8 is very poor <10 is low)Final number of unique mapping, dup-filtered, chrM filtered readsNumber of reads in called peak regionsFraction of reads in called peak regionsNumber of reads in promoter regionsFraction of reads in promoter regionsNumber of reads in enhancer regionsFraction of reads in enhancer regions
    rep11879441450599.880171745379212262600.295988868340.1239293699260.4095
    Modelling Metadata
    MetricValue
    auPRC0.5873
    Calibrated Recall at 50% FDR0.233
    Number of Positive Examples in Test Data154780
    Number of Negative Examples in Test Data7916071
    Imbalance Ratio in Test Data0.0192
    Test Chromosomeschr2, chr3, chr19
In [4]:
from matlas.reports import display_paiwise_pattern_comparison
from matlas.reports import display_denovo_patterns
In [5]:
display_denovo_patterns(data_name, modisco_root=modisco_root)
TF-MoDISco is using the TensorFlow backend.
The following two links show list of Denovo Patterns and corresponding Motifs discovered by TF-MoDISco
Click here for Denovo Patterns by TF-MoDISco: #25
Pattern NameTF Name(s)Modisco
metacluster_0/pattern_0 # seqlets: 2694 SequenceContrib ScoresHyp_Contrib Scores
Sp2, Sp3, Sp1, Sp5, Klf5, Wt1, Maz, Klf15, Klf4, Zfx,

Klf1, Egr1, Klf3, Klf6, Sall4, Zbtb17, Egr2, Zfp281, Klf8, Rela, Klf7,

Klf12, Sp4, Usf2, Mxi1, E2f6, Bcl6, Fli1, Mbd2
metacluster_0/pattern_1 # seqlets: 1642 SequenceContrib ScoresHyp_Contrib Scores
Trp63, Trp73, Trp53
metacluster_0/pattern_2 # seqlets: 1523 SequenceContrib ScoresHyp_Contrib Scores
Nfib, Nfia, Nfic
metacluster_0/pattern_3 # seqlets: 1462 SequenceContrib ScoresHyp_Contrib Scores
Jund, Fos, Jun, Junb, Fosl2, Fosl1, Fosb, Atf3, Jdp2, Batf,

Bach2, Nfe2l2, Nfe2, Bach1
metacluster_0/pattern_4 # seqlets: 1065 SequenceContrib ScoresHyp_Contrib Scores
Ctcf, Ctcfl
metacluster_0/pattern_5 # seqlets: 963 SequenceContrib ScoresHyp_Contrib Scores
Creb1, Atf1, Creb5, Atf7, Atf2, Crem, Nfil3, Srebf1, Tef, Tfec,

Tfe3, Mafb, Mlx, Rxrb, Xbp1, Dbp, Hlf, Usf1, Bhlhe40, Tfeb, Creb3l2,

Srebf2, Mitf, Cebpb, Arntl, Clock, Gmeb2, Cebpa
metacluster_0/pattern_6 # seqlets: 915 SequenceContrib ScoresHyp_Contrib Scores
Gata4, Gata2, Gata3, Gata1, Tal1, Gata6, Gata5, Mecom
metacluster_0/pattern_7 # seqlets: 874 SequenceContrib ScoresHyp_Contrib Scores
Gabpa, Elf1, Elk1, Elk4, Erg, Elk3, Ets1, Elf5, Etv5, Fev,

Elf2, Etv1, Etv4, Ehf, Elf4, Etv6, Etv3, XP_911724.4, Elf3, Spi1, Etv2,

Spdef, Spic, Spib
metacluster_0/pattern_8 # seqlets: 828 SequenceContrib ScoresHyp_Contrib Scores
Tfap2a, Tfap2c, Tfap2b, Tfap2e
metacluster_0/pattern_9 # seqlets: 827 SequenceContrib ScoresHyp_Contrib Scores
Rfx1, Zfp335
metacluster_0/pattern_10 # seqlets: 801 SequenceContrib ScoresHyp_Contrib Scores
Grhl2
metacluster_0/pattern_11 # seqlets: 477 SequenceContrib ScoresHyp_Contrib Scores
Cebpd, Cebpg, Cebpe, Ddit3, Atf4
metacluster_0/pattern_12 # seqlets: 464 SequenceContrib ScoresHyp_Contrib Scores
Tead2, Tead4, Tead1
metacluster_0/pattern_13 # seqlets: 452 SequenceContrib ScoresHyp_Contrib Scores
Pou2f2, Pou2f1
metacluster_0/pattern_14 # seqlets: 449 SequenceContrib ScoresHyp_Contrib Scores
metacluster_0/pattern_15 # seqlets: 398 SequenceContrib ScoresHyp_Contrib Scores
Nfyb, Nfyc, Nfya, Foxi1, Pbx3
metacluster_0/pattern_16 # seqlets: 338 SequenceContrib ScoresHyp_Contrib Scores
Nrf1
metacluster_0/pattern_17 # seqlets: 310 SequenceContrib ScoresHyp_Contrib Scores
Rfx4, Rfx2, Rfx6, Rfx7, Rfx3, Stat4
metacluster_0/pattern_18 # seqlets: 296 SequenceContrib ScoresHyp_Contrib Scores
Irf1, Irf2, Irf7, Prdm1, Irf8, Irf9, Stat2, Irf4, Stat1, Irf3,

Irf5
metacluster_0/pattern_19 # seqlets: 259 SequenceContrib ScoresHyp_Contrib Scores
Taf1, Yy1, Zfp42
metacluster_0/pattern_20 # seqlets: 205 SequenceContrib ScoresHyp_Contrib Scores
Nfkb1, Relb, Nfkb2, Rel
metacluster_0/pattern_21 # seqlets: 164 SequenceContrib ScoresHyp_Contrib Scores
Zfp143, Thap11, Tbx2
metacluster_0/pattern_22 # seqlets: 74 SequenceContrib ScoresHyp_Contrib Scores
Foxd3, Foxg1, Foxj3, Foxa2, Foxa3, Foxk1, Foxb1, Foxp2, Foxo3, Foxa1,

Foxc1, Foxd1, Gm5294, Foxj2, Foxc2, Foxp1, Foxl1, Foxj1, Foxm1, Foxl2, Foxo1,

Sry
metacluster_0/pattern_23 # seqlets: 42 SequenceContrib ScoresHyp_Contrib Scores
metacluster_0/pattern_24 # seqlets: 40 SequenceContrib ScoresHyp_Contrib Scores
Mef2d, Mef2a, Mef2c
Click here for Motifs by TF-MoDISco: #186
TF NamePattern(s)
Sp2
Pattern NameModiscoSignificance
metacluster_0/pattern_01.45449e-06
metacluster_0/pattern_90.000114953
metacluster_0/pattern_140.0409791
metacluster_0/pattern_160.00118626
metacluster_0/pattern_190.000308684
Sp3
Pattern NameModiscoSignificance
metacluster_0/pattern_01.45449e-06
metacluster_0/pattern_90.000620906
metacluster_0/pattern_140.0255259
metacluster_0/pattern_160.012209000000000001
metacluster_0/pattern_190.00183893
Sp1
Pattern NameModiscoSignificance
metacluster_0/pattern_01.45449e-06
metacluster_0/pattern_90.00273238
metacluster_0/pattern_160.0178721
metacluster_0/pattern_190.00183893
Sp5
Pattern NameModiscoSignificance
metacluster_0/pattern_01.45449e-06
Klf5
Pattern NameModiscoSignificance
metacluster_0/pattern_01.0572e-05
metacluster_0/pattern_140.0414622
Wt1
Pattern NameModiscoSignificance
metacluster_0/pattern_01.0572e-05
Maz
Pattern NameModiscoSignificance
metacluster_0/pattern_02.0902199999999998e-05
Klf15
Pattern NameModiscoSignificance
metacluster_0/pattern_02.2283000000000003e-05
Klf4
Pattern NameModiscoSignificance
metacluster_0/pattern_00.00488147
metacluster_0/pattern_140.015264600000000001
Zfx
Pattern NameModiscoSignificance
metacluster_0/pattern_00.0379545
metacluster_0/pattern_90.0144988
metacluster_0/pattern_160.0104894
metacluster_0/pattern_190.00183893
Klf1
Pattern NameModiscoSignificance
metacluster_0/pattern_00.0193703
metacluster_0/pattern_140.0125436
Egr1
Pattern NameModiscoSignificance
metacluster_0/pattern_00.012823500000000002
Klf3
Pattern NameModiscoSignificance
metacluster_0/pattern_00.000145416
metacluster_0/pattern_90.00248048
metacluster_0/pattern_140.015264600000000001
Klf6
Pattern NameModiscoSignificance
metacluster_0/pattern_00.000320122
metacluster_0/pattern_140.0255259
Sall4
Pattern NameModiscoSignificance
metacluster_0/pattern_00.000941148
Zbtb17
Pattern NameModiscoSignificance
metacluster_0/pattern_00.00176915
Egr2
Pattern NameModiscoSignificance
metacluster_0/pattern_00.00262522
Zfp281
Pattern NameModiscoSignificance
metacluster_0/pattern_00.00301945
Klf8
Pattern NameModiscoSignificance
metacluster_0/pattern_00.00488147
metacluster_0/pattern_140.00123632
Rela
Pattern NameModiscoSignificance
metacluster_0/pattern_00.00488147
metacluster_0/pattern_203.6488199999999994e-06
Klf7
Pattern NameModiscoSignificance
metacluster_0/pattern_00.00609425
metacluster_0/pattern_140.00114106
Klf12
Pattern NameModiscoSignificance
metacluster_0/pattern_00.0105551
metacluster_0/pattern_140.00123632
Sp4
Pattern NameModiscoSignificance
metacluster_0/pattern_00.040729699999999994
metacluster_0/pattern_90.0311012
metacluster_0/pattern_140.0528853
Usf2
Pattern NameModiscoSignificance
metacluster_0/pattern_00.0175873
metacluster_0/pattern_50.05920159999999999
metacluster_0/pattern_90.019513
Mxi1
Pattern NameModiscoSignificance
metacluster_0/pattern_00.019615999999999998
metacluster_0/pattern_90.0120537
metacluster_0/pattern_190.018124599999999998
E2f6
Pattern NameModiscoSignificance
metacluster_0/pattern_00.0379545
Bcl6
Pattern NameModiscoSignificance
metacluster_0/pattern_00.040729699999999994
metacluster_0/pattern_170.0426404
Fli1
Pattern NameModiscoSignificance
metacluster_0/pattern_00.0423464
metacluster_0/pattern_70.00440783
metacluster_0/pattern_90.0593847
Mbd2
Pattern NameModiscoSignificance
metacluster_0/pattern_00.0567884
metacluster_0/pattern_90.0172165
Trp63
Pattern NameModiscoSignificance
metacluster_0/pattern_11.94297e-09
Trp73
Pattern NameModiscoSignificance
metacluster_0/pattern_12.39969e-09
Trp53
Pattern NameModiscoSignificance
metacluster_0/pattern_14.19981e-08
Nfib
Pattern NameModiscoSignificance
metacluster_0/pattern_22.64407e-06
Nfia
Pattern NameModiscoSignificance
metacluster_0/pattern_20.000344725
Nfic
Pattern NameModiscoSignificance
metacluster_0/pattern_20.0027792
Jund
Pattern NameModiscoSignificance
metacluster_0/pattern_30.00566585
metacluster_0/pattern_50.05140830000000001
Fos
Pattern NameModiscoSignificance
metacluster_0/pattern_31.5767600000000003e-06
Jun
Pattern NameModiscoSignificance
metacluster_0/pattern_30.0331171
metacluster_0/pattern_50.030888599999999995
Junb
Pattern NameModiscoSignificance
metacluster_0/pattern_30.0189713
Fosl2
Pattern NameModiscoSignificance
metacluster_0/pattern_30.000918205
metacluster_0/pattern_50.0254242
Fosl1
Pattern NameModiscoSignificance
metacluster_0/pattern_30.049952699999999996
metacluster_0/pattern_50.030888599999999995
Fosb
Pattern NameModiscoSignificance
metacluster_0/pattern_36.846060000000001e-06
Atf3
Pattern NameModiscoSignificance
metacluster_0/pattern_31.38518e-05
metacluster_0/pattern_50.0207092
Jdp2
Pattern NameModiscoSignificance
metacluster_0/pattern_30.0007587439999999999
metacluster_0/pattern_50.00119589
Batf
Pattern NameModiscoSignificance
metacluster_0/pattern_30.0018128
Bach2
Pattern NameModiscoSignificance
metacluster_0/pattern_30.00988682
Nfe2l2
Pattern NameModiscoSignificance
metacluster_0/pattern_30.0184139
Nfe2
Pattern NameModiscoSignificance
metacluster_0/pattern_30.0176711
Bach1
Pattern NameModiscoSignificance
metacluster_0/pattern_30.018409599999999998
Ctcf
Pattern NameModiscoSignificance
metacluster_0/pattern_41.8494400000000002e-14
metacluster_0/pattern_90.00103426
Ctcfl
Pattern NameModiscoSignificance
metacluster_0/pattern_44.46291e-08
metacluster_0/pattern_90.00047466
Creb1
Pattern NameModiscoSignificance
metacluster_0/pattern_50.000171437
Atf1
Pattern NameModiscoSignificance
metacluster_0/pattern_50.00984281
Creb5
Pattern NameModiscoSignificance
metacluster_0/pattern_50.000171437
Atf7
Pattern NameModiscoSignificance
metacluster_0/pattern_50.000217983
Atf2
Pattern NameModiscoSignificance
metacluster_0/pattern_50.00105645
Crem
Pattern NameModiscoSignificance
metacluster_0/pattern_50.00151183
Nfil3
Pattern NameModiscoSignificance
metacluster_0/pattern_50.00911157
metacluster_0/pattern_110.015631700000000002
Srebf1
Pattern NameModiscoSignificance
metacluster_0/pattern_50.0540702
Tef
Pattern NameModiscoSignificance
metacluster_0/pattern_50.00984281
metacluster_0/pattern_110.00554707
Tfec
Pattern NameModiscoSignificance
metacluster_0/pattern_50.0592981
Tfe3
Pattern NameModiscoSignificance
metacluster_0/pattern_50.0318831
Mafb
Pattern NameModiscoSignificance
metacluster_0/pattern_50.014466399999999999
Mlx
Pattern NameModiscoSignificance
metacluster_0/pattern_50.0177905
Rxrb
Pattern NameModiscoSignificance
metacluster_0/pattern_50.0201017
Xbp1
Pattern NameModiscoSignificance
metacluster_0/pattern_50.0201017
Dbp
Pattern NameModiscoSignificance
metacluster_0/pattern_50.0254242
metacluster_0/pattern_110.0575541
Hlf
Pattern NameModiscoSignificance
metacluster_0/pattern_50.029649400000000003
metacluster_0/pattern_110.00930823
Usf1
Pattern NameModiscoSignificance
metacluster_0/pattern_50.0321402
Bhlhe40
Pattern NameModiscoSignificance
metacluster_0/pattern_50.05140830000000001
Tfeb
Pattern NameModiscoSignificance
metacluster_0/pattern_50.05140830000000001
Creb3l2
Pattern NameModiscoSignificance
metacluster_0/pattern_50.030888599999999995
Srebf2
Pattern NameModiscoSignificance
metacluster_0/pattern_50.0318831
Mitf
Pattern NameModiscoSignificance
metacluster_0/pattern_50.0478074
Cebpb
Pattern NameModiscoSignificance
metacluster_0/pattern_50.05140830000000001
metacluster_0/pattern_110.00128821
Arntl
Pattern NameModiscoSignificance
metacluster_0/pattern_50.0478074
Clock
Pattern NameModiscoSignificance
metacluster_0/pattern_50.05920159999999999
Gmeb2
Pattern NameModiscoSignificance
metacluster_0/pattern_50.05920159999999999
Cebpa
Pattern NameModiscoSignificance
metacluster_0/pattern_50.0592981
metacluster_0/pattern_110.00113711
Gata4
Pattern NameModiscoSignificance
metacluster_0/pattern_60.00155963
Gata2
Pattern NameModiscoSignificance
metacluster_0/pattern_60.000171281
Gata3
Pattern NameModiscoSignificance
metacluster_0/pattern_60.039887599999999995
Gata1
Pattern NameModiscoSignificance
metacluster_0/pattern_60.00155963
Tal1
Pattern NameModiscoSignificance
metacluster_0/pattern_60.00022837400000000002
Gata6
Pattern NameModiscoSignificance
metacluster_0/pattern_60.00228272
Gata5
Pattern NameModiscoSignificance
metacluster_0/pattern_60.0120624
Mecom
Pattern NameModiscoSignificance
metacluster_0/pattern_60.0589707
Gabpa
Pattern NameModiscoSignificance
metacluster_0/pattern_70.00354661
Elf1
Pattern NameModiscoSignificance
metacluster_0/pattern_78.59789e-09
Elk1
Pattern NameModiscoSignificance
metacluster_0/pattern_70.00354661
Elk4
Pattern NameModiscoSignificance
metacluster_0/pattern_70.00440783
Erg
Pattern NameModiscoSignificance
metacluster_0/pattern_70.0046253
Elk3
Pattern NameModiscoSignificance
metacluster_0/pattern_70.00354661
Ets1
Pattern NameModiscoSignificance
metacluster_0/pattern_70.00570172
Elf5
Pattern NameModiscoSignificance
metacluster_0/pattern_70.00738802
Etv5
Pattern NameModiscoSignificance
metacluster_0/pattern_70.00288637
Fev
Pattern NameModiscoSignificance
metacluster_0/pattern_70.00299961
Elf2
Pattern NameModiscoSignificance
metacluster_0/pattern_70.00593852
Etv1
Pattern NameModiscoSignificance
metacluster_0/pattern_70.00354661
Etv4
Pattern NameModiscoSignificance
metacluster_0/pattern_70.00415417
Ehf
Pattern NameModiscoSignificance
metacluster_0/pattern_70.00436028
Elf4
Pattern NameModiscoSignificance
metacluster_0/pattern_70.00354661
Etv6
Pattern NameModiscoSignificance
metacluster_0/pattern_70.00354661
Etv3
Pattern NameModiscoSignificance
metacluster_0/pattern_70.00607658
XP_911724.4
Pattern NameModiscoSignificance
metacluster_0/pattern_70.00607658
Elf3
Pattern NameModiscoSignificance
metacluster_0/pattern_70.0159872
Spi1
Pattern NameModiscoSignificance
metacluster_0/pattern_70.054979099999999996
Etv2
Pattern NameModiscoSignificance
metacluster_0/pattern_70.0126027
Spdef
Pattern NameModiscoSignificance
metacluster_0/pattern_70.027090499999999997
Spic
Pattern NameModiscoSignificance
metacluster_0/pattern_70.054979099999999996
Spib
Pattern NameModiscoSignificance
metacluster_0/pattern_70.0568189
metacluster_0/pattern_180.0392955
Tfap2a
Pattern NameModiscoSignificance
metacluster_0/pattern_80.00743869
Tfap2c
Pattern NameModiscoSignificance
metacluster_0/pattern_80.00103616
Tfap2b
Pattern NameModiscoSignificance
metacluster_0/pattern_80.00711546
Tfap2e
Pattern NameModiscoSignificance
metacluster_0/pattern_80.00428449
Rfx1
Pattern NameModiscoSignificance
metacluster_0/pattern_90.0322059
metacluster_0/pattern_170.00831617
metacluster_0/pattern_190.00183893
Zfp335
Pattern NameModiscoSignificance
metacluster_0/pattern_90.0472163
Grhl2
Pattern NameModiscoSignificance
metacluster_0/pattern_101.95598e-07
Cebpd
Pattern NameModiscoSignificance
metacluster_0/pattern_110.00146284
Cebpg
Pattern NameModiscoSignificance
metacluster_0/pattern_110.0224515
Cebpe
Pattern NameModiscoSignificance
metacluster_0/pattern_110.004517
Ddit3
Pattern NameModiscoSignificance
metacluster_0/pattern_110.015631700000000002
Atf4
Pattern NameModiscoSignificance
metacluster_0/pattern_110.028668700000000002
Tead2
Pattern NameModiscoSignificance
metacluster_0/pattern_120.000235083
Tead4
Pattern NameModiscoSignificance
metacluster_0/pattern_120.000162297
Tead1
Pattern NameModiscoSignificance
metacluster_0/pattern_120.000852801
Pou2f2
Pattern NameModiscoSignificance
metacluster_0/pattern_130.00395037
Pou2f1
Pattern NameModiscoSignificance
metacluster_0/pattern_130.00471581
Nfyb
Pattern NameModiscoSignificance
metacluster_0/pattern_151.5034e-10
Nfyc
Pattern NameModiscoSignificance
metacluster_0/pattern_154.90867e-10
Nfya
Pattern NameModiscoSignificance
metacluster_0/pattern_152.3554e-09
Foxi1
Pattern NameModiscoSignificance
metacluster_0/pattern_153.02255e-06
Pbx3
Pattern NameModiscoSignificance
metacluster_0/pattern_157.32828e-06
Nrf1
Pattern NameModiscoSignificance
metacluster_0/pattern_164.1051e-06
Rfx4
Pattern NameModiscoSignificance
metacluster_0/pattern_170.0007065060000000001
Rfx2
Pattern NameModiscoSignificance
metacluster_0/pattern_170.015520500000000001
Rfx6
Pattern NameModiscoSignificance
metacluster_0/pattern_170.0007065060000000001
Rfx7
Pattern NameModiscoSignificance
metacluster_0/pattern_170.00336641
Rfx3
Pattern NameModiscoSignificance
metacluster_0/pattern_170.018149900000000004
Stat4
Pattern NameModiscoSignificance
metacluster_0/pattern_170.0322322
Irf1
Pattern NameModiscoSignificance
metacluster_0/pattern_184.6265e-09
Irf2
Pattern NameModiscoSignificance
metacluster_0/pattern_180.00211404
Irf7
Pattern NameModiscoSignificance
metacluster_0/pattern_183.48696e-05
Prdm1
Pattern NameModiscoSignificance
metacluster_0/pattern_180.000149868
Irf8
Pattern NameModiscoSignificance
metacluster_0/pattern_180.000359557
Irf9
Pattern NameModiscoSignificance
metacluster_0/pattern_180.000431809
Stat2
Pattern NameModiscoSignificance
metacluster_0/pattern_180.000464021
Irf4
Pattern NameModiscoSignificance
metacluster_0/pattern_180.00511886
Stat1
Pattern NameModiscoSignificance
metacluster_0/pattern_180.00147885
Irf3
Pattern NameModiscoSignificance
metacluster_0/pattern_180.0205807
Irf5
Pattern NameModiscoSignificance
metacluster_0/pattern_180.0302418
Taf1
Pattern NameModiscoSignificance
metacluster_0/pattern_194.19746e-06
Yy1
Pattern NameModiscoSignificance
metacluster_0/pattern_194.8476e-05
Zfp42
Pattern NameModiscoSignificance
metacluster_0/pattern_190.0172512
Nfkb1
Pattern NameModiscoSignificance
metacluster_0/pattern_204.41419e-06
Relb
Pattern NameModiscoSignificance
metacluster_0/pattern_206.728390000000001e-05
Nfkb2
Pattern NameModiscoSignificance
metacluster_0/pattern_200.00020088099999999998
Rel
Pattern NameModiscoSignificance
metacluster_0/pattern_200.00498305
Zfp143
Pattern NameModiscoSignificance
metacluster_0/pattern_211.4986199999999998e-17
Thap11
Pattern NameModiscoSignificance
metacluster_0/pattern_211.4986199999999998e-17
Tbx2
Pattern NameModiscoSignificance
metacluster_0/pattern_219.999689999999999e-14
Foxd3
Pattern NameModiscoSignificance
metacluster_0/pattern_220.000121681
Foxg1
Pattern NameModiscoSignificance
metacluster_0/pattern_220.0009953289999999999
Foxj3
Pattern NameModiscoSignificance
metacluster_0/pattern_220.0009953289999999999
Foxa2
Pattern NameModiscoSignificance
metacluster_0/pattern_220.0017256
Foxa3
Pattern NameModiscoSignificance
metacluster_0/pattern_220.0007107289999999999
Foxk1
Pattern NameModiscoSignificance
metacluster_0/pattern_220.00732079
Foxb1
Pattern NameModiscoSignificance
metacluster_0/pattern_220.0007107289999999999
Foxp2
Pattern NameModiscoSignificance
metacluster_0/pattern_220.00366737
Foxo3
Pattern NameModiscoSignificance
metacluster_0/pattern_220.013048400000000002
Foxa1
Pattern NameModiscoSignificance
metacluster_0/pattern_220.0007435860000000001
Foxc1
Pattern NameModiscoSignificance
metacluster_0/pattern_220.00786624
Foxd1
Pattern NameModiscoSignificance
metacluster_0/pattern_220.0007571689999999999
Gm5294
Pattern NameModiscoSignificance
metacluster_0/pattern_220.0008712969999999999
Foxj2
Pattern NameModiscoSignificance
metacluster_0/pattern_220.0122906
Foxc2
Pattern NameModiscoSignificance
metacluster_0/pattern_220.0009953289999999999
Foxp1
Pattern NameModiscoSignificance
metacluster_0/pattern_220.00117891
Foxl1
Pattern NameModiscoSignificance
metacluster_0/pattern_220.00136594
Foxj1
Pattern NameModiscoSignificance
metacluster_0/pattern_220.00321865
Foxm1
Pattern NameModiscoSignificance
metacluster_0/pattern_220.00321865
Foxl2
Pattern NameModiscoSignificance
metacluster_0/pattern_220.00624483
Foxo1
Pattern NameModiscoSignificance
metacluster_0/pattern_220.026490100000000003
Sry
Pattern NameModiscoSignificance
metacluster_0/pattern_220.034787900000000004
Mef2d
Pattern NameModiscoSignificance
metacluster_0/pattern_243.64209e-08
Mef2a
Pattern NameModiscoSignificance
metacluster_0/pattern_249.65709e-05
Mef2c
Pattern NameModiscoSignificance
metacluster_0/pattern_241.50753e-06
In [6]:
display_paiwise_pattern_comparison(data_name, modisco_root, homer_root)
Number of CISBP TFs obtained by TF-MoDISco and Homer
Shared TFs between TF-MoDISco and Homer: #76
TF NameModiscoHomer
Rxrb
Pattern NameModiscoSignificance
metacluster_0/pattern_50.0201017
Pattern NameHomerSignificance
motif19.motif0.053061800000000006
Mecom
Pattern NameModiscoSignificance
metacluster_0/pattern_60.0589707
Pattern NameHomerSignificance
motif14.motif0.0376179
Ctcf
Pattern NameModiscoSignificance
metacluster_0/pattern_41.8494400000000002e-14
metacluster_0/pattern_90.00103426
Pattern NameHomerSignificance
motif2.motif9.733550000000001e-06
Klf4
Pattern NameModiscoSignificance
metacluster_0/pattern_00.00488147
metacluster_0/pattern_140.015264600000000001
Pattern NameHomerSignificance
motif3.motif0.00653052
Klf5
Pattern NameModiscoSignificance
metacluster_0/pattern_01.0572e-05
metacluster_0/pattern_140.0414622
Pattern NameHomerSignificance
motif3.motif0.010763
Tbx2
Pattern NameModiscoSignificance
metacluster_0/pattern_219.999689999999999e-14
Pattern NameHomerSignificance
motif6.motif5.73214e-05
Bach2
Pattern NameModiscoSignificance
metacluster_0/pattern_30.00988682
Pattern NameHomerSignificance
motif1.motif0.00475216
Jun
Pattern NameModiscoSignificance
metacluster_0/pattern_30.0331171
metacluster_0/pattern_50.030888599999999995
Pattern NameHomerSignificance
motif1.motif1.2678299999999999e-05
motif19.motif0.053061800000000006
Spic
Pattern NameModiscoSignificance
metacluster_0/pattern_70.054979099999999996
Pattern NameHomerSignificance
motif12.motif0.023003700000000002
Atf7
Pattern NameModiscoSignificance
metacluster_0/pattern_50.000217983
Pattern NameHomerSignificance
motif19.motif0.00113482
Gata6
Pattern NameModiscoSignificance
metacluster_0/pattern_60.00228272
Pattern NameHomerSignificance
motif14.motif0.0376179
Nfe2l2
Pattern NameModiscoSignificance
metacluster_0/pattern_30.0184139
Pattern NameHomerSignificance
motif1.motif0.053011800000000005
Klf12
Pattern NameModiscoSignificance
metacluster_0/pattern_00.0105551
metacluster_0/pattern_140.00123632
Pattern NameHomerSignificance
motif3.motif0.00242725
Jdp2
Pattern NameModiscoSignificance
metacluster_0/pattern_30.0007587439999999999
metacluster_0/pattern_50.00119589
Pattern NameHomerSignificance
motif1.motif0.00261051
motif19.motif0.00554876
Etv3
Pattern NameModiscoSignificance
metacluster_0/pattern_70.00607658
Pattern NameHomerSignificance
motif12.motif0.00874107
Creb5
Pattern NameModiscoSignificance
metacluster_0/pattern_50.000171437
Pattern NameHomerSignificance
motif19.motif0.00020145900000000002
Elk3
Pattern NameModiscoSignificance
metacluster_0/pattern_70.00354661
Pattern NameHomerSignificance
motif12.motif0.00497755
Egr1
Pattern NameModiscoSignificance
metacluster_0/pattern_00.012823500000000002
Pattern NameHomerSignificance
motif3.motif0.028144
Jund
Pattern NameModiscoSignificance
metacluster_0/pattern_30.00566585
metacluster_0/pattern_50.05140830000000001
Pattern NameHomerSignificance
motif1.motif0.0423949
Ctcfl
Pattern NameModiscoSignificance
metacluster_0/pattern_44.46291e-08
metacluster_0/pattern_90.00047466
Pattern NameHomerSignificance
motif2.motif0.000436907
Fosb
Pattern NameModiscoSignificance
metacluster_0/pattern_36.846060000000001e-06
Pattern NameHomerSignificance
motif1.motif0.000295328
Klf8
Pattern NameModiscoSignificance
metacluster_0/pattern_00.00488147
metacluster_0/pattern_140.00123632
Pattern NameHomerSignificance
motif3.motif0.00016593
Elk4
Pattern NameModiscoSignificance
metacluster_0/pattern_70.00440783
Pattern NameHomerSignificance
motif12.motif0.00690314
Atf1
Pattern NameModiscoSignificance
metacluster_0/pattern_50.00984281
Pattern NameHomerSignificance
motif19.motif0.000345395
Nfil3
Pattern NameModiscoSignificance
metacluster_0/pattern_50.00911157
metacluster_0/pattern_110.015631700000000002
Pattern NameHomerSignificance
motif19.motif0.053061800000000006
Etv4
Pattern NameModiscoSignificance
metacluster_0/pattern_70.00415417
Pattern NameHomerSignificance
motif12.motif0.00733698
Klf1
Pattern NameModiscoSignificance
metacluster_0/pattern_00.0193703
metacluster_0/pattern_140.0125436
Pattern NameHomerSignificance
motif3.motif0.000284281
Fev
Pattern NameModiscoSignificance
metacluster_0/pattern_70.00299961
Pattern NameHomerSignificance
motif12.motif0.00497755
Fosl1
Pattern NameModiscoSignificance
metacluster_0/pattern_30.049952699999999996
metacluster_0/pattern_50.030888599999999995
Pattern NameHomerSignificance
motif1.motif3.88996e-05
Batf
Pattern NameModiscoSignificance
metacluster_0/pattern_30.0018128
Pattern NameHomerSignificance
motif1.motif0.0008396339999999999
Bach1
Pattern NameModiscoSignificance
metacluster_0/pattern_30.018409599999999998
Pattern NameHomerSignificance
motif1.motif0.0193165
Rela
Pattern NameModiscoSignificance
metacluster_0/pattern_00.00488147
metacluster_0/pattern_203.6488199999999994e-06
Pattern NameHomerSignificance
motif8.motif0.0314457
Etv6
Pattern NameModiscoSignificance
metacluster_0/pattern_70.00354661
Pattern NameHomerSignificance
motif12.motif0.00497755
XP_911724.4
Pattern NameModiscoSignificance
metacluster_0/pattern_70.00607658
Pattern NameHomerSignificance
motif12.motif0.00816713
Elf5
Pattern NameModiscoSignificance
metacluster_0/pattern_70.00738802
Pattern NameHomerSignificance
motif12.motif0.0102963
Fli1
Pattern NameModiscoSignificance
metacluster_0/pattern_00.0423464
metacluster_0/pattern_70.00440783
metacluster_0/pattern_90.0593847
Pattern NameHomerSignificance
motif12.motif0.00690314
Spib
Pattern NameModiscoSignificance
metacluster_0/pattern_70.0568189
metacluster_0/pattern_180.0392955
Pattern NameHomerSignificance
motif12.motif0.0175269
Fosl2
Pattern NameModiscoSignificance
metacluster_0/pattern_30.000918205
metacluster_0/pattern_50.0254242
Pattern NameHomerSignificance
motif1.motif0.000244897
Grhl2
Pattern NameModiscoSignificance
metacluster_0/pattern_101.95598e-07
Pattern NameHomerSignificance
motif4.motif0.000268435
Ets1
Pattern NameModiscoSignificance
metacluster_0/pattern_70.00570172
Pattern NameHomerSignificance
motif12.motif0.00816713
Klf7
Pattern NameModiscoSignificance
metacluster_0/pattern_00.00609425
metacluster_0/pattern_140.00114106
Pattern NameHomerSignificance
motif3.motif0.00026843
Elf2
Pattern NameModiscoSignificance
metacluster_0/pattern_70.00593852
Pattern NameHomerSignificance
motif12.motif0.00609523
Gabpa
Pattern NameModiscoSignificance
metacluster_0/pattern_70.00354661
Pattern NameHomerSignificance
motif12.motif0.00497755
Klf6
Pattern NameModiscoSignificance
metacluster_0/pattern_00.000320122
metacluster_0/pattern_140.0255259
Pattern NameHomerSignificance
motif3.motif0.00556584
Etv2
Pattern NameModiscoSignificance
metacluster_0/pattern_70.0126027
Pattern NameHomerSignificance
motif12.motif0.022143299999999998
Sp2
Pattern NameModiscoSignificance
metacluster_0/pattern_01.45449e-06
metacluster_0/pattern_90.000114953
metacluster_0/pattern_140.0409791
metacluster_0/pattern_160.00118626
metacluster_0/pattern_190.000308684
Pattern NameHomerSignificance
motif3.motif0.0378049
Mafb
Pattern NameModiscoSignificance
metacluster_0/pattern_50.014466399999999999
Pattern NameHomerSignificance
motif19.motif0.00483559
Sp4
Pattern NameModiscoSignificance
metacluster_0/pattern_00.040729699999999994
metacluster_0/pattern_90.0311012
metacluster_0/pattern_140.0528853
Pattern NameHomerSignificance
motif3.motif0.00862788
Klf3
Pattern NameModiscoSignificance
metacluster_0/pattern_00.000145416
metacluster_0/pattern_90.00248048
metacluster_0/pattern_140.015264600000000001
Pattern NameHomerSignificance
motif3.motif0.000457143
Gata1
Pattern NameModiscoSignificance
metacluster_0/pattern_60.00155963
Pattern NameHomerSignificance
motif14.motif0.0312132
Gata2
Pattern NameModiscoSignificance
metacluster_0/pattern_60.000171281
Pattern NameHomerSignificance
motif14.motif0.0312132
Etv1
Pattern NameModiscoSignificance
metacluster_0/pattern_70.00354661
Pattern NameHomerSignificance
motif12.motif0.00497755
Nfe2
Pattern NameModiscoSignificance
metacluster_0/pattern_30.0176711
Pattern NameHomerSignificance
motif1.motif0.0202137
Nrf1
Pattern NameModiscoSignificance
metacluster_0/pattern_164.1051e-06
Pattern NameHomerSignificance
motif21.motif2.23215e-06
Atf2
Pattern NameModiscoSignificance
metacluster_0/pattern_50.00105645
Pattern NameHomerSignificance
motif19.motif0.00323642
Trp73
Pattern NameModiscoSignificance
metacluster_0/pattern_12.39969e-09
Pattern NameHomerSignificance
motif9.motif0.00375957
Ehf
Pattern NameModiscoSignificance
metacluster_0/pattern_70.00436028
Pattern NameHomerSignificance
motif12.motif0.00629846
Spdef
Pattern NameModiscoSignificance
metacluster_0/pattern_70.027090499999999997
Pattern NameHomerSignificance
motif12.motif0.0456304
Fos
Pattern NameModiscoSignificance
metacluster_0/pattern_31.5767600000000003e-06
Pattern NameHomerSignificance
motif1.motif1.2678299999999999e-05
Creb1
Pattern NameModiscoSignificance
metacluster_0/pattern_50.000171437
Pattern NameHomerSignificance
motif19.motif0.00476733
Thap11
Pattern NameModiscoSignificance
metacluster_0/pattern_211.4986199999999998e-17
Pattern NameHomerSignificance
motif6.motif5.3254e-07
Elf3
Pattern NameModiscoSignificance
metacluster_0/pattern_70.0159872
Pattern NameHomerSignificance
motif12.motif0.0233121
Spi1
Pattern NameModiscoSignificance
metacluster_0/pattern_70.054979099999999996
Pattern NameHomerSignificance
motif12.motif0.0565433
Nfkb1
Pattern NameModiscoSignificance
metacluster_0/pattern_204.41419e-06
Pattern NameHomerSignificance
motif8.motif0.0314457
Elk1
Pattern NameModiscoSignificance
metacluster_0/pattern_70.00354661
Pattern NameHomerSignificance
motif12.motif0.00497755
Etv5
Pattern NameModiscoSignificance
metacluster_0/pattern_70.00288637
Pattern NameHomerSignificance
motif12.motif0.00440883
Junb
Pattern NameModiscoSignificance
metacluster_0/pattern_30.0189713
Pattern NameHomerSignificance
motif1.motif0.000326874
Elf4
Pattern NameModiscoSignificance
metacluster_0/pattern_70.00354661
Pattern NameHomerSignificance
motif12.motif0.00526783
Erg
Pattern NameModiscoSignificance
metacluster_0/pattern_70.0046253
Pattern NameHomerSignificance
motif12.motif0.00690314
Atf3
Pattern NameModiscoSignificance
metacluster_0/pattern_31.38518e-05
metacluster_0/pattern_50.0207092
Pattern NameHomerSignificance
motif1.motif0.000295328
Zfp143
Pattern NameModiscoSignificance
metacluster_0/pattern_211.4986199999999998e-17
Pattern NameHomerSignificance
motif6.motif1.6477299999999999e-06
Elf1
Pattern NameModiscoSignificance
metacluster_0/pattern_78.59789e-09
Pattern NameHomerSignificance
motif12.motif6.46214e-05
Gata3
Pattern NameModiscoSignificance
metacluster_0/pattern_60.039887599999999995
Pattern NameHomerSignificance
motif14.motif0.00564225
Crem
Pattern NameModiscoSignificance
metacluster_0/pattern_50.00151183
Pattern NameHomerSignificance
motif19.motif0.00476733
Trp63
Pattern NameModiscoSignificance
metacluster_0/pattern_11.94297e-09
Pattern NameHomerSignificance
motif9.motif0.00444857
Gata4
Pattern NameModiscoSignificance
metacluster_0/pattern_60.00155963
Pattern NameHomerSignificance
motif14.motif0.029081700000000002
Unique TF-MoDISco TFs: #110
TF NameModiscoHomer
Dbp
Pattern NameModiscoSignificance
metacluster_0/pattern_50.0254242
metacluster_0/pattern_110.0575541
Absent
Creb3l2
Pattern NameModiscoSignificance
metacluster_0/pattern_50.030888599999999995
Absent
Cebpe
Pattern NameModiscoSignificance
metacluster_0/pattern_110.004517
Absent
Pou2f1
Pattern NameModiscoSignificance
metacluster_0/pattern_130.00471581
Absent
Sp1
Pattern NameModiscoSignificance
metacluster_0/pattern_01.45449e-06
metacluster_0/pattern_90.00273238
metacluster_0/pattern_160.0178721
metacluster_0/pattern_190.00183893
Absent
Bcl6
Pattern NameModiscoSignificance
metacluster_0/pattern_00.040729699999999994
metacluster_0/pattern_170.0426404
Absent
Irf2
Pattern NameModiscoSignificance
metacluster_0/pattern_180.00211404
Absent
Stat2
Pattern NameModiscoSignificance
metacluster_0/pattern_180.000464021
Absent
Foxc2
Pattern NameModiscoSignificance
metacluster_0/pattern_220.0009953289999999999
Absent
Foxd3
Pattern NameModiscoSignificance
metacluster_0/pattern_220.000121681
Absent
Rfx4
Pattern NameModiscoSignificance
metacluster_0/pattern_170.0007065060000000001
Absent
Usf1
Pattern NameModiscoSignificance
metacluster_0/pattern_50.0321402
Absent
Wt1
Pattern NameModiscoSignificance
metacluster_0/pattern_01.0572e-05
Absent
Irf3
Pattern NameModiscoSignificance
metacluster_0/pattern_180.0205807
Absent
Foxd1
Pattern NameModiscoSignificance
metacluster_0/pattern_220.0007571689999999999
Absent
Zfp281
Pattern NameModiscoSignificance
metacluster_0/pattern_00.00301945
Absent
Cebpg
Pattern NameModiscoSignificance
metacluster_0/pattern_110.0224515
Absent
E2f6
Pattern NameModiscoSignificance
metacluster_0/pattern_00.0379545
Absent
Yy1
Pattern NameModiscoSignificance
metacluster_0/pattern_194.8476e-05
Absent
Stat1
Pattern NameModiscoSignificance
metacluster_0/pattern_180.00147885
Absent
Tead1
Pattern NameModiscoSignificance
metacluster_0/pattern_120.000852801
Absent
Sry
Pattern NameModiscoSignificance
metacluster_0/pattern_220.034787900000000004
Absent
Arntl
Pattern NameModiscoSignificance
metacluster_0/pattern_50.0478074
Absent
Relb
Pattern NameModiscoSignificance
metacluster_0/pattern_206.728390000000001e-05
Absent
Sp5
Pattern NameModiscoSignificance
metacluster_0/pattern_01.45449e-06
Absent
Gm5294
Pattern NameModiscoSignificance
metacluster_0/pattern_220.0008712969999999999
Absent
Mef2d
Pattern NameModiscoSignificance
metacluster_0/pattern_243.64209e-08
Absent
Nfic
Pattern NameModiscoSignificance
metacluster_0/pattern_20.0027792
Absent
Rfx6
Pattern NameModiscoSignificance
metacluster_0/pattern_170.0007065060000000001
Absent
Gata5
Pattern NameModiscoSignificance
metacluster_0/pattern_60.0120624
Absent
Atf4
Pattern NameModiscoSignificance
metacluster_0/pattern_110.028668700000000002
Absent
Nfyc
Pattern NameModiscoSignificance
metacluster_0/pattern_154.90867e-10
Absent
Foxa2
Pattern NameModiscoSignificance
metacluster_0/pattern_220.0017256
Absent
Ddit3
Pattern NameModiscoSignificance
metacluster_0/pattern_110.015631700000000002
Absent
Foxa1
Pattern NameModiscoSignificance
metacluster_0/pattern_220.0007435860000000001
Absent
Zfp42
Pattern NameModiscoSignificance
metacluster_0/pattern_190.0172512
Absent
Mbd2
Pattern NameModiscoSignificance
metacluster_0/pattern_00.0567884
metacluster_0/pattern_90.0172165
Absent
Irf8
Pattern NameModiscoSignificance
metacluster_0/pattern_180.000359557
Absent
Clock
Pattern NameModiscoSignificance
metacluster_0/pattern_50.05920159999999999
Absent
Rfx3
Pattern NameModiscoSignificance
metacluster_0/pattern_170.018149900000000004
Absent
Mlx
Pattern NameModiscoSignificance
metacluster_0/pattern_50.0177905
Absent
Mef2c
Pattern NameModiscoSignificance
metacluster_0/pattern_241.50753e-06
Absent
Foxg1
Pattern NameModiscoSignificance
metacluster_0/pattern_220.0009953289999999999
Absent
Foxj3
Pattern NameModiscoSignificance
metacluster_0/pattern_220.0009953289999999999
Absent
Pbx3
Pattern NameModiscoSignificance
metacluster_0/pattern_157.32828e-06
Absent
Rfx2
Pattern NameModiscoSignificance
metacluster_0/pattern_170.015520500000000001
Absent
Mef2a
Pattern NameModiscoSignificance
metacluster_0/pattern_249.65709e-05
Absent
Zbtb17
Pattern NameModiscoSignificance
metacluster_0/pattern_00.00176915
Absent
Foxm1
Pattern NameModiscoSignificance
metacluster_0/pattern_220.00321865
Absent
Sall4
Pattern NameModiscoSignificance
metacluster_0/pattern_00.000941148
Absent
Foxp1
Pattern NameModiscoSignificance
metacluster_0/pattern_220.00117891
Absent
Usf2
Pattern NameModiscoSignificance
metacluster_0/pattern_00.0175873
metacluster_0/pattern_50.05920159999999999
metacluster_0/pattern_90.019513
Absent
Klf15
Pattern NameModiscoSignificance
metacluster_0/pattern_02.2283000000000003e-05
Absent
Pou2f2
Pattern NameModiscoSignificance
metacluster_0/pattern_130.00395037
Absent
Sp3
Pattern NameModiscoSignificance
metacluster_0/pattern_01.45449e-06
metacluster_0/pattern_90.000620906
metacluster_0/pattern_140.0255259
metacluster_0/pattern_160.012209000000000001
metacluster_0/pattern_190.00183893
Absent
Tfap2b
Pattern NameModiscoSignificance
metacluster_0/pattern_80.00711546
Absent
Prdm1
Pattern NameModiscoSignificance
metacluster_0/pattern_180.000149868
Absent
Irf9
Pattern NameModiscoSignificance
metacluster_0/pattern_180.000431809
Absent
Foxk1
Pattern NameModiscoSignificance
metacluster_0/pattern_220.00732079
Absent
Foxp2
Pattern NameModiscoSignificance
metacluster_0/pattern_220.00366737
Absent
Tead4
Pattern NameModiscoSignificance
metacluster_0/pattern_120.000162297
Absent
Rel
Pattern NameModiscoSignificance
metacluster_0/pattern_200.00498305
Absent
Gmeb2
Pattern NameModiscoSignificance
metacluster_0/pattern_50.05920159999999999
Absent
Foxc1
Pattern NameModiscoSignificance
metacluster_0/pattern_220.00786624
Absent
Tfe3
Pattern NameModiscoSignificance
metacluster_0/pattern_50.0318831
Absent
Bhlhe40
Pattern NameModiscoSignificance
metacluster_0/pattern_50.05140830000000001
Absent
Tfap2a
Pattern NameModiscoSignificance
metacluster_0/pattern_80.00743869
Absent
Foxl1
Pattern NameModiscoSignificance
metacluster_0/pattern_220.00136594
Absent
Tead2
Pattern NameModiscoSignificance
metacluster_0/pattern_120.000235083
Absent
Tfec
Pattern NameModiscoSignificance
metacluster_0/pattern_50.0592981
Absent
Irf1
Pattern NameModiscoSignificance
metacluster_0/pattern_184.6265e-09
Absent
Tal1
Pattern NameModiscoSignificance
metacluster_0/pattern_60.00022837400000000002
Absent
Xbp1
Pattern NameModiscoSignificance
metacluster_0/pattern_50.0201017
Absent
Nfia
Pattern NameModiscoSignificance
metacluster_0/pattern_20.000344725
Absent
Cebpb
Pattern NameModiscoSignificance
metacluster_0/pattern_50.05140830000000001
metacluster_0/pattern_110.00128821
Absent
Rfx1
Pattern NameModiscoSignificance
metacluster_0/pattern_90.0322059
metacluster_0/pattern_170.00831617
metacluster_0/pattern_190.00183893
Absent
Tfeb
Pattern NameModiscoSignificance
metacluster_0/pattern_50.05140830000000001
Absent
Tfap2c
Pattern NameModiscoSignificance
metacluster_0/pattern_80.00103616
Absent
Foxo3
Pattern NameModiscoSignificance
metacluster_0/pattern_220.013048400000000002
Absent
Zfp335
Pattern NameModiscoSignificance
metacluster_0/pattern_90.0472163
Absent
Cebpd
Pattern NameModiscoSignificance
metacluster_0/pattern_110.00146284
Absent
Srebf2
Pattern NameModiscoSignificance
metacluster_0/pattern_50.0318831
Absent
Irf5
Pattern NameModiscoSignificance
metacluster_0/pattern_180.0302418
Absent
Stat4
Pattern NameModiscoSignificance
metacluster_0/pattern_170.0322322
Absent
Taf1
Pattern NameModiscoSignificance
metacluster_0/pattern_194.19746e-06
Absent
Nfyb
Pattern NameModiscoSignificance
metacluster_0/pattern_151.5034e-10
Absent
Trp53
Pattern NameModiscoSignificance
metacluster_0/pattern_14.19981e-08
Absent
Nfya
Pattern NameModiscoSignificance
metacluster_0/pattern_152.3554e-09
Absent
Tfap2e
Pattern NameModiscoSignificance
metacluster_0/pattern_80.00428449
Absent
Irf4
Pattern NameModiscoSignificance
metacluster_0/pattern_180.00511886
Absent
Cebpa
Pattern NameModiscoSignificance
metacluster_0/pattern_50.0592981
metacluster_0/pattern_110.00113711
Absent
Irf7
Pattern NameModiscoSignificance
metacluster_0/pattern_183.48696e-05
Absent
Foxo1
Pattern NameModiscoSignificance
metacluster_0/pattern_220.026490100000000003
Absent
Foxa3
Pattern NameModiscoSignificance
metacluster_0/pattern_220.0007107289999999999
Absent
Mxi1
Pattern NameModiscoSignificance
metacluster_0/pattern_00.019615999999999998
metacluster_0/pattern_90.0120537
metacluster_0/pattern_190.018124599999999998
Absent
Hlf
Pattern NameModiscoSignificance
metacluster_0/pattern_50.029649400000000003
metacluster_0/pattern_110.00930823
Absent
Foxj1
Pattern NameModiscoSignificance
metacluster_0/pattern_220.00321865
Absent
Egr2
Pattern NameModiscoSignificance
metacluster_0/pattern_00.00262522
Absent
Zfx
Pattern NameModiscoSignificance
metacluster_0/pattern_00.0379545
metacluster_0/pattern_90.0144988
metacluster_0/pattern_160.0104894
metacluster_0/pattern_190.00183893
Absent
Rfx7
Pattern NameModiscoSignificance
metacluster_0/pattern_170.00336641
Absent
Mitf
Pattern NameModiscoSignificance
metacluster_0/pattern_50.0478074
Absent
Nfkb2
Pattern NameModiscoSignificance
metacluster_0/pattern_200.00020088099999999998
Absent
Foxj2
Pattern NameModiscoSignificance
metacluster_0/pattern_220.0122906
Absent
Foxi1
Pattern NameModiscoSignificance
metacluster_0/pattern_153.02255e-06
Absent
Nfib
Pattern NameModiscoSignificance
metacluster_0/pattern_22.64407e-06
Absent
Foxb1
Pattern NameModiscoSignificance
metacluster_0/pattern_220.0007107289999999999
Absent
Maz
Pattern NameModiscoSignificance
metacluster_0/pattern_02.0902199999999998e-05
Absent
Srebf1
Pattern NameModiscoSignificance
metacluster_0/pattern_50.0540702
Absent
Foxl2
Pattern NameModiscoSignificance
metacluster_0/pattern_220.00624483
Absent
Tef
Pattern NameModiscoSignificance
metacluster_0/pattern_50.00984281
metacluster_0/pattern_110.00554707
Absent
Unique Homer TFs: #3
TF NameModiscoHomer
Hand1Absent
Pattern NameHomerSignificance
motif3.motif0.030587
MafaAbsent
Pattern NameHomerSignificance
motif1.motif0.0360857
MafkAbsent
Pattern NameHomerSignificance
motif1.motif0.0278303