# Parameters
data_name = "NPC;mE6;A;GEO"
modisco_root = "/srv/scratch/msharmin/mouse_hem/with_tfd/full_mouse50/Naive_modisco2019"
tomtom_report_root = "http://mitra.stanford.edu/kundaje/msharmin/report/tomtom_outs/cells"
task_dir = "task_173-naivegw"
perf_file = "/srv/scratch/msharmin/mouse_hem/with_tfd/full_mouse50/fineFactorized/task_173-naivegw/NaiveauPRC.txt"
homer_root = "/srv/scratch/msharmin/mouse_hem/with_tfd/full_mouse50/Naive_scans"
reportfile = "/mnt/lab_data/kundaje/msharmin/annotations/filtering samples_MS2.xlsx"
sheetname = "filter23"

from matlas.reports import display_metadata

load data from labcluster

Using TensorFlow backend.
2019-08-30 19:19:40,812 [WARNING] git-lfs not installed

display_metadata(data_name, perf_file, reportfile, sheetname)

Sample Information

MetaData Name	Description
Cell type	neural progenitor cells(mE6)
Cell Group	Neural Cells and Tissues
Experiment Name	ATAC
Experiment Group	GEO

Pipeline Output

replicate	Naïve overlap peaks	IDR peaks	TSS enrichment (< 8 is very poor <10 is low)	Final number of unique mapping, dup-filtered, chrM filtered reads	Number of reads in called peak regions	Fraction of reads in called peak regions	Number of reads in promoter regions	Fraction of reads in promoter regions	Number of reads in enhancer regions	Fraction of reads in enhancer regions
rep1	223009	168664	7.3483	155399279	NA	NA	NA	NA	NA	NA

Modelling Metadata

Metric	Value
auPRC	0.6227
Calibrated Recall at 50% FDR	0.244
Number of Positive Examples in Test Data	113962
Number of Negative Examples in Test Data	7956889
Imbalance Ratio in Test Data	0.0141
Test Chromosomes	chr2, chr3, chr19

from matlas.reports import display_paiwise_pattern_comparison
from matlas.reports import display_denovo_patterns

display_denovo_patterns(data_name, modisco_root=modisco_root)

TF-MoDISco is using the TensorFlow backend.

The following two links show list of Denovo Patterns and corresponding Motifs discovered by TF-MoDISco

Click here for Denovo Patterns by TF-MoDISco: #19

Pattern Name	TF Name(s)	Modisco
metacluster_1/pattern_0 # seqlets: 2916 SequenceContrib ScoresHyp_Contrib Scores	Ctcf, Ctcfl
metacluster_1/pattern_1 # seqlets: 2620 SequenceContrib ScoresHyp_Contrib Scores	Sp2, Sp3, Sp1, Klf3, Klf6, Zfx, Sp4, Zbtb17, Wt1, Klf15, Egr1, Klf1, Maz, Zfp281, Usf2, Sp5, Klf5, Egr2, Klf7, Klf4, Nr1h4, Klf12, Klf8, Mxi1, Egr3, E2f4, Rfx1, E2f1, Mbd2, Tfap2b, Fli1, Ptf1a, E2f6, Tfap2c, Sall4
metacluster_1/pattern_2 # seqlets: 1953 SequenceContrib ScoresHyp_Contrib Scores	Nfib, Nfia, Nfic
metacluster_1/pattern_3 # seqlets: 1612 SequenceContrib ScoresHyp_Contrib Scores	Sox3, Sox9, Sox2, Sox4, Sox17, Sox6, Foxd1, Sox12, Nanog
metacluster_1/pattern_4 # seqlets: 1335 SequenceContrib ScoresHyp_Contrib Scores	Rfx2, Rfx3, Rfx4, Rfx7, Rfx6
metacluster_1/pattern_5 # seqlets: 1158 SequenceContrib ScoresHyp_Contrib Scores	Gabpa, Elk4, Elk1, Ets1, Erg, Elk3, Etv5, Fev, Etv4, Etv1, Elf1, Etv6, Etv3, XP_911724.4, Elf2, Etv2, Ehf, Elf5, Spi1, Elf4, Spdef, Elf3
metacluster_1/pattern_6 # seqlets: 1135 SequenceContrib ScoresHyp_Contrib Scores	Nfyb, Nfya, Nfyc, Foxi1, Pbx3
metacluster_1/pattern_7 # seqlets: 979 SequenceContrib ScoresHyp_Contrib Scores	Ascl2, Ascl1, Tcf3, Myog, Myod1, Bhlha15, Tcf12, Myf6, Tal1, Tcf7l1, Atoh1, Nhlh2, Nhlh1, Myf5, Tcf4, Lyl1, Olig2, Snai2, Neurod2, Tgif1, Neurog2, Snai1, Tcf21, Neurod1
metacluster_1/pattern_8 # seqlets: 952 SequenceContrib ScoresHyp_Contrib Scores	Atf7, Atf1, Atf2, Creb1, Creb5, Jdp2, Crem, Tfec, Srebf1, Bhlhe40, Rxrb, Dbp, Hlf, Nfil3, Jun, Mlx, Mitf, Tef, Tfe3, Usf1, Cebpb, Atf3, Mafb, Creb3l2, Cebpa, Xbp1
metacluster_1/pattern_9 # seqlets: 831 SequenceContrib ScoresHyp_Contrib Scores	Pou2f1, Pou2f3, Pou2f2, Rax, Evx2, Lhx3, Lhx2, Lhx9, Nkx1-2, Otp, Pou3f1, Rhox6, Emx2, Vsx1, Hoxa2, Prrx2, Pou1f1, Prrx1, Phox2b, Lbx2, En2, Phox2a, Gbx1, Shox2, Arx, Noto, Lhx8, Esx1, Pax7, Pdx1, Uncx, Lhx4, Hoxc5, Pou3f2, Isx, Pax6, Evx1, Vsx2, Isl1, Vax2, Prop1, Hoxd3, Alx3, Gsx2, Gbx2, Alx1, Alx4, Nkx1-1, Vax1, Lmx1b, Phf21a, Hoxb3, Hoxb4, Pou5f1, En1
metacluster_1/pattern_10 # seqlets: 770 SequenceContrib ScoresHyp_Contrib Scores	Nrf1
metacluster_1/pattern_11 # seqlets: 684 SequenceContrib ScoresHyp_Contrib Scores
metacluster_1/pattern_12 # seqlets: 609 SequenceContrib ScoresHyp_Contrib Scores	Tead2, Tead4, Tead1
metacluster_1/pattern_13 # seqlets: 461 SequenceContrib ScoresHyp_Contrib Scores	Taf1, Yy1, Zfp42
metacluster_1/pattern_14 # seqlets: 429 SequenceContrib ScoresHyp_Contrib Scores
metacluster_1/pattern_15 # seqlets: 402 SequenceContrib ScoresHyp_Contrib Scores	Zfp143, Thap11, Tbx2
metacluster_1/pattern_16 # seqlets: 400 SequenceContrib ScoresHyp_Contrib Scores	Junb, Fosl1, Jund, Fosb, Fosl2, Fos, Bach2, Batf, Nfe2l2, Bach1, Nfe2, Mafa, Mafk
metacluster_1/pattern_17 # seqlets: 194 SequenceContrib ScoresHyp_Contrib Scores	Mef2d, Mef2a, Mef2c
metacluster_1/pattern_18 # seqlets: 58 SequenceContrib ScoresHyp_Contrib Scores	Rest

Click here for Motifs by TF-MoDISco: #213

TF Name	Pattern(s)
Ctcf	Pattern Name Modisco Significance metacluster_1/pattern_0 4.1484500000000003e-10 metacluster_1/pattern_1 0.0406959
Ctcfl	Pattern Name Modisco Significance metacluster_1/pattern_0 4.1484500000000003e-10 metacluster_1/pattern_1 0.00739873
Sp2	Pattern Name Modisco Significance metacluster_1/pattern_1 7.419980000000001e-16 metacluster_1/pattern_10 0.0381791 metacluster_1/pattern_13 1.5984200000000002e-05 metacluster_1/pattern_18 0.016397799999999997
Sp3	Pattern Name Modisco Significance metacluster_1/pattern_1 2.64898e-12 metacluster_1/pattern_13 6.43973e-05 metacluster_1/pattern_18 0.0176766
Sp1	Pattern Name Modisco Significance metacluster_1/pattern_1 0.00029735 metacluster_1/pattern_13 6.43973e-05 metacluster_1/pattern_18 0.0176766
Klf3	Pattern Name Modisco Significance metacluster_1/pattern_1 1.57684e-08 metacluster_1/pattern_13 0.0213372
Klf6	Pattern Name Modisco Significance metacluster_1/pattern_1 2.4040400000000004e-06
Zfx	Pattern Name Modisco Significance metacluster_1/pattern_1 0.00343524 metacluster_1/pattern_13 0.00336681
Sp4	Pattern Name Modisco Significance metacluster_1/pattern_1 0.00468586
Zbtb17	Pattern Name Modisco Significance metacluster_1/pattern_1 5.79996e-06 metacluster_1/pattern_13 0.00870384
Wt1	Pattern Name Modisco Significance metacluster_1/pattern_1 9.58115e-06 metacluster_1/pattern_13 0.012141899999999999
Klf15	Pattern Name Modisco Significance metacluster_1/pattern_1 1.63794e-05 metacluster_1/pattern_13 0.0412726
Egr1	Pattern Name Modisco Significance metacluster_1/pattern_1 0.0396399
Klf1	Pattern Name Modisco Significance metacluster_1/pattern_1 4.60841e-05
Maz	Pattern Name Modisco Significance metacluster_1/pattern_1 0.000111579 metacluster_1/pattern_13 0.0142196
Zfp281	Pattern Name Modisco Significance metacluster_1/pattern_1 0.00325735
Usf2	Pattern Name Modisco Significance metacluster_1/pattern_1 0.00144422 metacluster_1/pattern_8 0.0561692 metacluster_1/pattern_13 0.0257858
Sp5	Pattern Name Modisco Significance metacluster_1/pattern_1 0.00211103 metacluster_1/pattern_13 0.0426967
Klf5	Pattern Name Modisco Significance metacluster_1/pattern_1 0.00211103
Egr2	Pattern Name Modisco Significance metacluster_1/pattern_1 0.0190517 metacluster_1/pattern_13 0.0426967
Klf7	Pattern Name Modisco Significance metacluster_1/pattern_1 0.00447961
Klf4	Pattern Name Modisco Significance metacluster_1/pattern_1 0.0175531
Nr1h4	Pattern Name Modisco Significance metacluster_1/pattern_1 0.00821423
Klf12	Pattern Name Modisco Significance metacluster_1/pattern_1 0.00845711
Klf8	Pattern Name Modisco Significance metacluster_1/pattern_1 0.010387299999999999
Mxi1	Pattern Name Modisco Significance metacluster_1/pattern_1 0.010387299999999999 metacluster_1/pattern_13 0.0257858
Egr3	Pattern Name Modisco Significance metacluster_1/pattern_1 0.0141061
E2f4	Pattern Name Modisco Significance metacluster_1/pattern_1 0.0152894
Rfx1	Pattern Name Modisco Significance metacluster_1/pattern_1 0.0168303 metacluster_1/pattern_4 1.1834300000000001e-05 metacluster_1/pattern_13 0.00597908
E2f1	Pattern Name Modisco Significance metacluster_1/pattern_1 0.0178458
Mbd2	Pattern Name Modisco Significance metacluster_1/pattern_1 0.021844
Tfap2b	Pattern Name Modisco Significance metacluster_1/pattern_1 0.025717200000000003
Fli1	Pattern Name Modisco Significance metacluster_1/pattern_1 0.033375800000000004 metacluster_1/pattern_5 0.00121311
Ptf1a	Pattern Name Modisco Significance metacluster_1/pattern_1 0.0378542 metacluster_1/pattern_7 0.00265161
E2f6	Pattern Name Modisco Significance metacluster_1/pattern_1 0.0391485
Tfap2c	Pattern Name Modisco Significance metacluster_1/pattern_1 0.0396399
Sall4	Pattern Name Modisco Significance metacluster_1/pattern_1 0.048688
Nfib	Pattern Name Modisco Significance metacluster_1/pattern_2 0.000106104
Nfia	Pattern Name Modisco Significance metacluster_1/pattern_2 0.0008066610000000001
Nfic	Pattern Name Modisco Significance metacluster_1/pattern_2 0.00624277
Sox3	Pattern Name Modisco Significance metacluster_1/pattern_3 1.94952e-05
Sox9	Pattern Name Modisco Significance metacluster_1/pattern_3 1.94952e-05
Sox2	Pattern Name Modisco Significance metacluster_1/pattern_3 0.018194400000000003
Sox4	Pattern Name Modisco Significance metacluster_1/pattern_3 0.00552389
Sox17	Pattern Name Modisco Significance metacluster_1/pattern_3 0.00022440400000000002
Sox6	Pattern Name Modisco Significance metacluster_1/pattern_3 0.00129544
Foxd1	Pattern Name Modisco Significance metacluster_1/pattern_3 0.026622399999999997
Sox12	Pattern Name Modisco Significance metacluster_1/pattern_3 0.029158
Nanog	Pattern Name Modisco Significance metacluster_1/pattern_3 0.0355724
Rfx2	Pattern Name Modisco Significance metacluster_1/pattern_4 2.3043200000000002e-06 metacluster_1/pattern_14 1.95868e-05
Rfx3	Pattern Name Modisco Significance metacluster_1/pattern_4 0.026782900000000002 metacluster_1/pattern_14 0.00547438
Rfx4	Pattern Name Modisco Significance metacluster_1/pattern_4 0.000117001
Rfx7	Pattern Name Modisco Significance metacluster_1/pattern_4 0.0116089 metacluster_1/pattern_14 0.048843199999999996
Rfx6	Pattern Name Modisco Significance metacluster_1/pattern_4 0.0222875 metacluster_1/pattern_14 4.8968500000000004e-05
Gabpa	Pattern Name Modisco Significance metacluster_1/pattern_5 0.000952295
Elk4	Pattern Name Modisco Significance metacluster_1/pattern_5 0.000952295
Elk1	Pattern Name Modisco Significance metacluster_1/pattern_5 0.000865157
Ets1	Pattern Name Modisco Significance metacluster_1/pattern_5 0.00118485
Erg	Pattern Name Modisco Significance metacluster_1/pattern_5 0.00121311
Elk3	Pattern Name Modisco Significance metacluster_1/pattern_5 0.000729862
Etv5	Pattern Name Modisco Significance metacluster_1/pattern_5 0.00033551699999999997
Fev	Pattern Name Modisco Significance metacluster_1/pattern_5 0.000482913
Etv4	Pattern Name Modisco Significance metacluster_1/pattern_5 0.00552681
Etv1	Pattern Name Modisco Significance metacluster_1/pattern_5 0.000952295
Elf1	Pattern Name Modisco Significance metacluster_1/pattern_5 0.00116868
Etv6	Pattern Name Modisco Significance metacluster_1/pattern_5 0.0159506
Etv3	Pattern Name Modisco Significance metacluster_1/pattern_5 0.00176625
XP_911724.4	Pattern Name Modisco Significance metacluster_1/pattern_5 0.00176625
Elf2	Pattern Name Modisco Significance metacluster_1/pattern_5 0.0171965
Etv2	Pattern Name Modisco Significance metacluster_1/pattern_5 0.00320631
Ehf	Pattern Name Modisco Significance metacluster_1/pattern_5 0.0362291
Elf5	Pattern Name Modisco Significance metacluster_1/pattern_5 0.0565996
Spi1	Pattern Name Modisco Significance metacluster_1/pattern_5 0.0114929
Elf4	Pattern Name Modisco Significance metacluster_1/pattern_5 0.011874
Spdef	Pattern Name Modisco Significance metacluster_1/pattern_5 0.025281799999999997
Elf3	Pattern Name Modisco Significance metacluster_1/pattern_5 0.030965899999999998
Nfyb	Pattern Name Modisco Significance metacluster_1/pattern_6 4.14342e-12
Nfya	Pattern Name Modisco Significance metacluster_1/pattern_6 2.70502e-10
Nfyc	Pattern Name Modisco Significance metacluster_1/pattern_6 2.70502e-10
Foxi1	Pattern Name Modisco Significance metacluster_1/pattern_6 4.30589e-07
Pbx3	Pattern Name Modisco Significance metacluster_1/pattern_6 1.72741e-05
Ascl2	Pattern Name Modisco Significance metacluster_1/pattern_7 0.00043653699999999997
Ascl1	Pattern Name Modisco Significance metacluster_1/pattern_7 0.00166986
Tcf3	Pattern Name Modisco Significance metacluster_1/pattern_7 0.00882758
Myog	Pattern Name Modisco Significance metacluster_1/pattern_7 0.00753281
Myod1	Pattern Name Modisco Significance metacluster_1/pattern_7 0.00230502
Bhlha15	Pattern Name Modisco Significance metacluster_1/pattern_7 0.00142326
Tcf12	Pattern Name Modisco Significance metacluster_1/pattern_7 0.0342872
Myf6	Pattern Name Modisco Significance metacluster_1/pattern_7 0.044253
Tal1	Pattern Name Modisco Significance metacluster_1/pattern_7 0.00265161
Tcf7l1	Pattern Name Modisco Significance metacluster_1/pattern_7 0.00265161
Atoh1	Pattern Name Modisco Significance metacluster_1/pattern_7 0.00537982
Nhlh2	Pattern Name Modisco Significance metacluster_1/pattern_7 0.00345819
Nhlh1	Pattern Name Modisco Significance metacluster_1/pattern_7 0.00537982
Myf5	Pattern Name Modisco Significance metacluster_1/pattern_7 0.00684333
Tcf4	Pattern Name Modisco Significance metacluster_1/pattern_7 0.010267499999999999
Lyl1	Pattern Name Modisco Significance metacluster_1/pattern_7 0.0101383
Olig2	Pattern Name Modisco Significance metacluster_1/pattern_7 0.044425900000000004
Snai2	Pattern Name Modisco Significance metacluster_1/pattern_7 0.017612299999999997
Neurod2	Pattern Name Modisco Significance metacluster_1/pattern_7 0.0178967
Tgif1	Pattern Name Modisco Significance metacluster_1/pattern_7 0.027662799999999998
Neurog2	Pattern Name Modisco Significance metacluster_1/pattern_7 0.0312153
Snai1	Pattern Name Modisco Significance metacluster_1/pattern_7 0.0422182
Tcf21	Pattern Name Modisco Significance metacluster_1/pattern_7 0.0436622
Neurod1	Pattern Name Modisco Significance metacluster_1/pattern_7 0.0459211
Atf7	Pattern Name Modisco Significance metacluster_1/pattern_8 0.0010747
Atf1	Pattern Name Modisco Significance metacluster_1/pattern_8 0.039824599999999995
Atf2	Pattern Name Modisco Significance metacluster_1/pattern_8 0.00121903
Creb1	Pattern Name Modisco Significance metacluster_1/pattern_8 0.0010797
Creb5	Pattern Name Modisco Significance metacluster_1/pattern_8 0.000190625
Jdp2	Pattern Name Modisco Significance metacluster_1/pattern_8 0.00503571 metacluster_1/pattern_16 0.000862884
Crem	Pattern Name Modisco Significance metacluster_1/pattern_8 0.00474086
Tfec	Pattern Name Modisco Significance metacluster_1/pattern_8 0.00781575
Srebf1	Pattern Name Modisco Significance metacluster_1/pattern_8 0.04971130000000001
Bhlhe40	Pattern Name Modisco Significance metacluster_1/pattern_8 0.0235793
Rxrb	Pattern Name Modisco Significance metacluster_1/pattern_8 0.0162319
Dbp	Pattern Name Modisco Significance metacluster_1/pattern_8 0.0456745
Hlf	Pattern Name Modisco Significance metacluster_1/pattern_8 0.021769999999999998
Nfil3	Pattern Name Modisco Significance metacluster_1/pattern_8 0.0497535
Jun	Pattern Name Modisco Significance metacluster_1/pattern_8 0.022362 metacluster_1/pattern_16 1.17385e-06
Mlx	Pattern Name Modisco Significance metacluster_1/pattern_8 0.023091099999999996
Mitf	Pattern Name Modisco Significance metacluster_1/pattern_8 0.0235793
Tef	Pattern Name Modisco Significance metacluster_1/pattern_8 0.0241457
Tfe3	Pattern Name Modisco Significance metacluster_1/pattern_8 0.025671199999999998
Usf1	Pattern Name Modisco Significance metacluster_1/pattern_8 0.0302159
Cebpb	Pattern Name Modisco Significance metacluster_1/pattern_8 0.0456745
Atf3	Pattern Name Modisco Significance metacluster_1/pattern_8 0.0340943 metacluster_1/pattern_16 1.45787e-06
Mafb	Pattern Name Modisco Significance metacluster_1/pattern_8 0.036770300000000006
Creb3l2	Pattern Name Modisco Significance metacluster_1/pattern_8 0.0368222
Cebpa	Pattern Name Modisco Significance metacluster_1/pattern_8 0.0456745
Xbp1	Pattern Name Modisco Significance metacluster_1/pattern_8 0.0525903
Pou2f1	Pattern Name Modisco Significance metacluster_1/pattern_9 0.050105800000000006
Pou2f3	Pattern Name Modisco Significance metacluster_1/pattern_9 0.0303168
Pou2f2	Pattern Name Modisco Significance metacluster_1/pattern_9 0.03823819999999999
Rax	Pattern Name Modisco Significance metacluster_1/pattern_9 0.0303168
Evx2	Pattern Name Modisco Significance metacluster_1/pattern_9 0.0303168
Lhx3	Pattern Name Modisco Significance metacluster_1/pattern_9 0.0557111
Lhx2	Pattern Name Modisco Significance metacluster_1/pattern_9 0.03421969999999999
Lhx9	Pattern Name Modisco Significance metacluster_1/pattern_9 0.0303168
Nkx1-2	Pattern Name Modisco Significance metacluster_1/pattern_9 0.0303168
Otp	Pattern Name Modisco Significance metacluster_1/pattern_9 0.0303168
Pou3f1	Pattern Name Modisco Significance metacluster_1/pattern_9 0.051033800000000004
Rhox6	Pattern Name Modisco Significance metacluster_1/pattern_9 0.0303168
Emx2	Pattern Name Modisco Significance metacluster_1/pattern_9 0.0303168
Vsx1	Pattern Name Modisco Significance metacluster_1/pattern_9 0.043975099999999996
Hoxa2	Pattern Name Modisco Significance metacluster_1/pattern_9 0.055491
Prrx2	Pattern Name Modisco Significance metacluster_1/pattern_9 0.0403923
Pou1f1	Pattern Name Modisco Significance metacluster_1/pattern_9 0.0403923
Prrx1	Pattern Name Modisco Significance metacluster_1/pattern_9 0.0317732
Phox2b	Pattern Name Modisco Significance metacluster_1/pattern_9 0.0317732
Lbx2	Pattern Name Modisco Significance metacluster_1/pattern_9 0.0317732
En2	Pattern Name Modisco Significance metacluster_1/pattern_9 0.052281100000000004
Phox2a	Pattern Name Modisco Significance metacluster_1/pattern_9 0.043975099999999996
Gbx1	Pattern Name Modisco Significance metacluster_1/pattern_9 0.0403923
Shox2	Pattern Name Modisco Significance metacluster_1/pattern_9 0.0359961
Arx	Pattern Name Modisco Significance metacluster_1/pattern_9 0.03421969999999999
Noto	Pattern Name Modisco Significance metacluster_1/pattern_9 0.03421969999999999
Lhx8	Pattern Name Modisco Significance metacluster_1/pattern_9 0.043975099999999996
Esx1	Pattern Name Modisco Significance metacluster_1/pattern_9 0.03421969999999999
Pax7	Pattern Name Modisco Significance metacluster_1/pattern_9 0.03421969999999999
Pdx1	Pattern Name Modisco Significance metacluster_1/pattern_9 0.0476263
Uncx	Pattern Name Modisco Significance metacluster_1/pattern_9 0.036853199999999996
Lhx4	Pattern Name Modisco Significance metacluster_1/pattern_9 0.046795300000000005
Hoxc5	Pattern Name Modisco Significance metacluster_1/pattern_9 0.036853199999999996
Pou3f2	Pattern Name Modisco Significance metacluster_1/pattern_9 0.055491
Isx	Pattern Name Modisco Significance metacluster_1/pattern_9 0.0403923
Pax6	Pattern Name Modisco Significance metacluster_1/pattern_9 0.0403923
Evx1	Pattern Name Modisco Significance metacluster_1/pattern_9 0.0403923
Vsx2	Pattern Name Modisco Significance metacluster_1/pattern_9 0.0403923
Isl1	Pattern Name Modisco Significance metacluster_1/pattern_9 0.0403923
Vax2	Pattern Name Modisco Significance metacluster_1/pattern_9 0.0403923
Prop1	Pattern Name Modisco Significance metacluster_1/pattern_9 0.0421697
Hoxd3	Pattern Name Modisco Significance metacluster_1/pattern_9 0.043975099999999996
Alx3	Pattern Name Modisco Significance metacluster_1/pattern_9 0.0428084
Gsx2	Pattern Name Modisco Significance metacluster_1/pattern_9 0.0428084
Gbx2	Pattern Name Modisco Significance metacluster_1/pattern_9 0.0428084
Alx1	Pattern Name Modisco Significance metacluster_1/pattern_9 0.0451724
Alx4	Pattern Name Modisco Significance metacluster_1/pattern_9 0.0428084
Nkx1-1	Pattern Name Modisco Significance metacluster_1/pattern_9 0.043975099999999996
Vax1	Pattern Name Modisco Significance metacluster_1/pattern_9 0.043975099999999996
Lmx1b	Pattern Name Modisco Significance metacluster_1/pattern_9 0.043975099999999996
Phf21a	Pattern Name Modisco Significance metacluster_1/pattern_9 0.046815699999999995
Hoxb3	Pattern Name Modisco Significance metacluster_1/pattern_9 0.04984280000000001
Hoxb4	Pattern Name Modisco Significance metacluster_1/pattern_9 0.050105800000000006
Pou5f1	Pattern Name Modisco Significance metacluster_1/pattern_9 0.0531511
En1	Pattern Name Modisco Significance metacluster_1/pattern_9 0.0557111
Nrf1	Pattern Name Modisco Significance metacluster_1/pattern_10 2.34864e-07
Tead2	Pattern Name Modisco Significance metacluster_1/pattern_12 0.00036356199999999995
Tead4	Pattern Name Modisco Significance metacluster_1/pattern_12 8.26e-05
Tead1	Pattern Name Modisco Significance metacluster_1/pattern_12 0.000506361
Taf1	Pattern Name Modisco Significance metacluster_1/pattern_13 5.08062e-06
Yy1	Pattern Name Modisco Significance metacluster_1/pattern_13 1.85533e-05
Zfp42	Pattern Name Modisco Significance metacluster_1/pattern_13 0.012942799999999999
Zfp143	Pattern Name Modisco Significance metacluster_1/pattern_15 2.0770099999999998e-19
Thap11	Pattern Name Modisco Significance metacluster_1/pattern_15 2.5355999999999997e-19
Tbx2	Pattern Name Modisco Significance metacluster_1/pattern_15 7.21199e-13
Junb	Pattern Name Modisco Significance metacluster_1/pattern_16 1.45787e-06
Fosl1	Pattern Name Modisco Significance metacluster_1/pattern_16 1.45787e-06
Jund	Pattern Name Modisco Significance metacluster_1/pattern_16 0.014284799999999999
Fosb	Pattern Name Modisco Significance metacluster_1/pattern_16 2.4342e-06
Fosl2	Pattern Name Modisco Significance metacluster_1/pattern_16 0.000228105
Fos	Pattern Name Modisco Significance metacluster_1/pattern_16 2.83991e-06
Bach2	Pattern Name Modisco Significance metacluster_1/pattern_16 0.000599824
Batf	Pattern Name Modisco Significance metacluster_1/pattern_16 0.00956646
Nfe2l2	Pattern Name Modisco Significance metacluster_1/pattern_16 0.00194887
Bach1	Pattern Name Modisco Significance metacluster_1/pattern_16 0.00177116
Nfe2	Pattern Name Modisco Significance metacluster_1/pattern_16 0.00177116
Mafa	Pattern Name Modisco Significance metacluster_1/pattern_16 0.030530400000000003
Mafk	Pattern Name Modisco Significance metacluster_1/pattern_16 0.0597001
Mef2d	Pattern Name Modisco Significance metacluster_1/pattern_17 8.39182e-10
Mef2a	Pattern Name Modisco Significance metacluster_1/pattern_17 7.328180000000001e-05
Mef2c	Pattern Name Modisco Significance metacluster_1/pattern_17 3.50168e-07
Rest	Pattern Name Modisco Significance metacluster_1/pattern_18 4.7527999999999994e-14

display_paiwise_pattern_comparison(data_name, modisco_root, homer_root)

Number of CISBP TFs obtained by TF-MoDISco and Homer

Shared TFs between TF-MoDISco and Homer: #67

TF Name	Modisco	Homer
Ascl1	Pattern Name Modisco Significance metacluster_1/pattern_7 0.00166986	Pattern Name Homer Significance motif11.motif 0.0115942
Pou2f2	Pattern Name Modisco Significance metacluster_1/pattern_9 0.03823819999999999	Pattern Name Homer Significance motif16.motif 0.0425761
Sox9	Pattern Name Modisco Significance metacluster_1/pattern_3 1.94952e-05	Pattern Name Homer Significance motif7.motif 0.010248100000000001
Tgif1	Pattern Name Modisco Significance metacluster_1/pattern_7 0.027662799999999998	Pattern Name Homer Significance motif11.motif 0.0485226
Myod1	Pattern Name Modisco Significance metacluster_1/pattern_7 0.00230502	Pattern Name Homer Significance motif11.motif 0.0122527
Rfx7	Pattern Name Modisco Significance metacluster_1/pattern_4 0.0116089 metacluster_1/pattern_14 0.048843199999999996	Pattern Name Homer Significance motif2.motif 0.00584898
Myf5	Pattern Name Modisco Significance metacluster_1/pattern_7 0.00684333	Pattern Name Homer Significance motif11.motif 0.015268899999999998
Crem	Pattern Name Modisco Significance metacluster_1/pattern_8 0.00474086	Pattern Name Homer Significance motif10.motif 0.0508801
Ptf1a	Pattern Name Modisco Significance metacluster_1/pattern_1 0.0378542 metacluster_1/pattern_7 0.00265161	Pattern Name Homer Significance motif11.motif 0.023811000000000002
Sp1	Pattern Name Modisco Significance metacluster_1/pattern_1 0.00029735 metacluster_1/pattern_13 6.43973e-05 metacluster_1/pattern_18 0.0176766	Pattern Name Homer Significance motif3.motif 0.044588800000000005
Rfx3	Pattern Name Modisco Significance metacluster_1/pattern_4 0.026782900000000002 metacluster_1/pattern_14 0.00547438	Pattern Name Homer Significance motif2.motif 0.013964600000000002
Creb5	Pattern Name Modisco Significance metacluster_1/pattern_8 0.000190625	Pattern Name Homer Significance motif10.motif 0.024013800000000002
Nrf1	Pattern Name Modisco Significance metacluster_1/pattern_10 2.34864e-07	Pattern Name Homer Significance motif19.motif 3.4720400000000002e-06
Nhlh2	Pattern Name Modisco Significance metacluster_1/pattern_7 0.00345819	Pattern Name Homer Significance motif11.motif 0.025964099999999997
Tcf7l1	Pattern Name Modisco Significance metacluster_1/pattern_7 0.00265161	Pattern Name Homer Significance motif11.motif 0.00547962
E2f4	Pattern Name Modisco Significance metacluster_1/pattern_1 0.0152894	Pattern Name Homer Significance motif3.motif 0.000243945
Tcf3	Pattern Name Modisco Significance metacluster_1/pattern_7 0.00882758	Pattern Name Homer Significance motif11.motif 0.0505326
Atf2	Pattern Name Modisco Significance metacluster_1/pattern_8 0.00121903	Pattern Name Homer Significance motif10.motif 0.0268188
Rfx6	Pattern Name Modisco Significance metacluster_1/pattern_4 0.0222875 metacluster_1/pattern_14 4.8968500000000004e-05	Pattern Name Homer Significance motif2.motif 0.013261700000000001
Jdp2	Pattern Name Modisco Significance metacluster_1/pattern_8 0.00503571 metacluster_1/pattern_16 0.000862884	Pattern Name Homer Significance motif10.motif 0.0508801
Myf6	Pattern Name Modisco Significance metacluster_1/pattern_7 0.044253	Pattern Name Homer Significance motif11.motif 0.0273983
Neurod1	Pattern Name Modisco Significance metacluster_1/pattern_7 0.0459211	Pattern Name Homer Significance motif11.motif 0.028139599999999997
Klf15	Pattern Name Modisco Significance metacluster_1/pattern_1 1.63794e-05 metacluster_1/pattern_13 0.0412726	Pattern Name Homer Significance motif3.motif 0.0328827
Klf8	Pattern Name Modisco Significance metacluster_1/pattern_1 0.010387299999999999	Pattern Name Homer Significance motif3.motif 0.0328827
Rfx2	Pattern Name Modisco Significance metacluster_1/pattern_4 2.3043200000000002e-06 metacluster_1/pattern_14 1.95868e-05	Pattern Name Homer Significance motif2.motif 1.62491e-05
Sox4	Pattern Name Modisco Significance metacluster_1/pattern_3 0.00552389	Pattern Name Homer Significance motif7.motif 0.0189149
Sox2	Pattern Name Modisco Significance metacluster_1/pattern_3 0.018194400000000003	Pattern Name Homer Significance motif7.motif 0.017694
Tcf4	Pattern Name Modisco Significance metacluster_1/pattern_7 0.010267499999999999	Pattern Name Homer Significance motif11.motif 0.05519450000000001
Sp2	Pattern Name Modisco Significance metacluster_1/pattern_1 7.419980000000001e-16 metacluster_1/pattern_10 0.0381791 metacluster_1/pattern_13 1.5984200000000002e-05 metacluster_1/pattern_18 0.016397799999999997	Pattern Name Homer Significance motif3.motif 0.007232
Tbx2	Pattern Name Modisco Significance metacluster_1/pattern_15 7.21199e-13	Pattern Name Homer Significance motif4.motif 3.32285e-05
Egr1	Pattern Name Modisco Significance metacluster_1/pattern_1 0.0396399	Pattern Name Homer Significance motif3.motif 0.044588800000000005
Creb1	Pattern Name Modisco Significance metacluster_1/pattern_8 0.0010797	Pattern Name Homer Significance motif10.motif 0.024013800000000002
E2f1	Pattern Name Modisco Significance metacluster_1/pattern_1 0.0178458	Pattern Name Homer Significance motif3.motif 0.0011869
Lyl1	Pattern Name Modisco Significance metacluster_1/pattern_7 0.0101383	Pattern Name Homer Significance motif11.motif 0.0599058
Atf7	Pattern Name Modisco Significance metacluster_1/pattern_8 0.0010747	Pattern Name Homer Significance motif10.motif 0.0268188
E2f6	Pattern Name Modisco Significance metacluster_1/pattern_1 0.0391485	Pattern Name Homer Significance motif3.motif 0.0328827
Klf3	Pattern Name Modisco Significance metacluster_1/pattern_1 1.57684e-08 metacluster_1/pattern_13 0.0213372	Pattern Name Homer Significance motif3.motif 0.0107101
Klf6	Pattern Name Modisco Significance metacluster_1/pattern_1 2.4040400000000004e-06	Pattern Name Homer Significance motif3.motif 0.018941299999999998
Tal1	Pattern Name Modisco Significance metacluster_1/pattern_7 0.00265161	Pattern Name Homer Significance motif11.motif 0.0115942
Pou2f1	Pattern Name Modisco Significance metacluster_1/pattern_9 0.050105800000000006	Pattern Name Homer Significance motif16.motif 0.00300168
Atf1	Pattern Name Modisco Significance metacluster_1/pattern_8 0.039824599999999995	Pattern Name Homer Significance motif10.motif 0.00200551
Rfx4	Pattern Name Modisco Significance metacluster_1/pattern_4 0.000117001	Pattern Name Homer Significance motif2.motif 8.592059999999999e-05
Myog	Pattern Name Modisco Significance metacluster_1/pattern_7 0.00753281	Pattern Name Homer Significance motif11.motif 0.013184
Klf12	Pattern Name Modisco Significance metacluster_1/pattern_1 0.00845711	Pattern Name Homer Significance motif3.motif 0.044588800000000005
Ascl2	Pattern Name Modisco Significance metacluster_1/pattern_7 0.00043653699999999997	Pattern Name Homer Significance motif11.motif 0.0115942
Neurod2	Pattern Name Modisco Significance metacluster_1/pattern_7 0.0178967	Pattern Name Homer Significance motif11.motif 0.018741099999999997
Sp4	Pattern Name Modisco Significance metacluster_1/pattern_1 0.00468586	Pattern Name Homer Significance motif3.motif 0.044588800000000005
Ctcfl	Pattern Name Modisco Significance metacluster_1/pattern_0 4.1484500000000003e-10 metacluster_1/pattern_1 0.00739873	Pattern Name Homer Significance motif1.motif 0.000490435
Rfx1	Pattern Name Modisco Significance metacluster_1/pattern_1 0.0168303 metacluster_1/pattern_4 1.1834300000000001e-05 metacluster_1/pattern_13 0.00597908	Pattern Name Homer Significance motif2.motif 8.901309999999999e-05
Rxrb	Pattern Name Modisco Significance metacluster_1/pattern_8 0.0162319	Pattern Name Homer Significance motif10.motif 0.0268188
Atoh1	Pattern Name Modisco Significance metacluster_1/pattern_7 0.00537982	Pattern Name Homer Significance motif11.motif 0.018741099999999997
Neurog2	Pattern Name Modisco Significance metacluster_1/pattern_7 0.0312153	Pattern Name Homer Significance motif11.motif 0.018778200000000002
Lhx3	Pattern Name Modisco Significance metacluster_1/pattern_9 0.0557111	Pattern Name Homer Significance motif16.motif 0.0425761
Pou2f3	Pattern Name Modisco Significance metacluster_1/pattern_9 0.0303168	Pattern Name Homer Significance motif16.motif 0.0425761
Bhlha15	Pattern Name Modisco Significance metacluster_1/pattern_7 0.00142326	Pattern Name Homer Significance motif11.motif 0.0115942
Sp3	Pattern Name Modisco Significance metacluster_1/pattern_1 2.64898e-12 metacluster_1/pattern_13 6.43973e-05 metacluster_1/pattern_18 0.0176766	Pattern Name Homer Significance motif3.motif 0.0166578
Ctcf	Pattern Name Modisco Significance metacluster_1/pattern_0 4.1484500000000003e-10 metacluster_1/pattern_1 0.0406959	Pattern Name Homer Significance motif1.motif 4.1430900000000003e-05
Thap11	Pattern Name Modisco Significance metacluster_1/pattern_15 2.5355999999999997e-19	Pattern Name Homer Significance motif4.motif 4.02123e-08
Tcf12	Pattern Name Modisco Significance metacluster_1/pattern_7 0.0342872	Pattern Name Homer Significance motif11.motif 0.0251742
Olig2	Pattern Name Modisco Significance metacluster_1/pattern_7 0.044425900000000004	Pattern Name Homer Significance motif11.motif 0.0485226
Evx2	Pattern Name Modisco Significance metacluster_1/pattern_9 0.0303168	Pattern Name Homer Significance motif16.motif 0.0425761
Klf7	Pattern Name Modisco Significance metacluster_1/pattern_1 0.00447961	Pattern Name Homer Significance motif3.motif 0.018941299999999998
Zfp143	Pattern Name Modisco Significance metacluster_1/pattern_15 2.0770099999999998e-19	Pattern Name Homer Significance motif4.motif 4.02123e-08
Zbtb17	Pattern Name Modisco Significance metacluster_1/pattern_1 5.79996e-06 metacluster_1/pattern_13 0.00870384	Pattern Name Homer Significance motif3.motif 0.044588800000000005
Sox3	Pattern Name Modisco Significance metacluster_1/pattern_3 1.94952e-05	Pattern Name Homer Significance motif7.motif 0.0189149
Snai2	Pattern Name Modisco Significance metacluster_1/pattern_7 0.017612299999999997	Pattern Name Homer Significance motif11.motif 0.0402121
Snai1	Pattern Name Modisco Significance metacluster_1/pattern_7 0.0422182	Pattern Name Homer Significance motif11.motif 0.05612140000000001

Unique TF-MoDISco TFs: #146

TF Name	Modisco	Homer
Vsx2	Pattern Name Modisco Significance metacluster_1/pattern_9 0.0403923	Absent
Etv2	Pattern Name Modisco Significance metacluster_1/pattern_5 0.00320631	Absent
Elf4	Pattern Name Modisco Significance metacluster_1/pattern_5 0.011874	Absent
Pou3f2	Pattern Name Modisco Significance metacluster_1/pattern_9 0.055491	Absent
Mef2a	Pattern Name Modisco Significance metacluster_1/pattern_17 7.328180000000001e-05	Absent
Lhx8	Pattern Name Modisco Significance metacluster_1/pattern_9 0.043975099999999996	Absent
Pou3f1	Pattern Name Modisco Significance metacluster_1/pattern_9 0.051033800000000004	Absent
En1	Pattern Name Modisco Significance metacluster_1/pattern_9 0.0557111	Absent
Fev	Pattern Name Modisco Significance metacluster_1/pattern_5 0.000482913	Absent
Nanog	Pattern Name Modisco Significance metacluster_1/pattern_3 0.0355724	Absent
Nfyb	Pattern Name Modisco Significance metacluster_1/pattern_6 4.14342e-12	Absent
Tfap2c	Pattern Name Modisco Significance metacluster_1/pattern_1 0.0396399	Absent
Pax7	Pattern Name Modisco Significance metacluster_1/pattern_9 0.03421969999999999	Absent
En2	Pattern Name Modisco Significance metacluster_1/pattern_9 0.052281100000000004	Absent
Nfil3	Pattern Name Modisco Significance metacluster_1/pattern_8 0.0497535	Absent
Lhx2	Pattern Name Modisco Significance metacluster_1/pattern_9 0.03421969999999999	Absent
Arx	Pattern Name Modisco Significance metacluster_1/pattern_9 0.03421969999999999	Absent
Creb3l2	Pattern Name Modisco Significance metacluster_1/pattern_8 0.0368222	Absent
Emx2	Pattern Name Modisco Significance metacluster_1/pattern_9 0.0303168	Absent
Nfic	Pattern Name Modisco Significance metacluster_1/pattern_2 0.00624277	Absent
Atf3	Pattern Name Modisco Significance metacluster_1/pattern_8 0.0340943 metacluster_1/pattern_16 1.45787e-06	Absent
Elk4	Pattern Name Modisco Significance metacluster_1/pattern_5 0.000952295	Absent
Nr1h4	Pattern Name Modisco Significance metacluster_1/pattern_1 0.00821423	Absent
Zfp281	Pattern Name Modisco Significance metacluster_1/pattern_1 0.00325735	Absent
Hoxd3	Pattern Name Modisco Significance metacluster_1/pattern_9 0.043975099999999996	Absent
Nfe2	Pattern Name Modisco Significance metacluster_1/pattern_16 0.00177116	Absent
Usf2	Pattern Name Modisco Significance metacluster_1/pattern_1 0.00144422 metacluster_1/pattern_8 0.0561692 metacluster_1/pattern_13 0.0257858	Absent
Prrx2	Pattern Name Modisco Significance metacluster_1/pattern_9 0.0403923	Absent
Zfp42	Pattern Name Modisco Significance metacluster_1/pattern_13 0.012942799999999999	Absent
Gbx1	Pattern Name Modisco Significance metacluster_1/pattern_9 0.0403923	Absent
Vax2	Pattern Name Modisco Significance metacluster_1/pattern_9 0.0403923	Absent
Etv6	Pattern Name Modisco Significance metacluster_1/pattern_5 0.0159506	Absent
Sall4	Pattern Name Modisco Significance metacluster_1/pattern_1 0.048688	Absent
Foxi1	Pattern Name Modisco Significance metacluster_1/pattern_6 4.30589e-07	Absent
Usf1	Pattern Name Modisco Significance metacluster_1/pattern_8 0.0302159	Absent
Zfx	Pattern Name Modisco Significance metacluster_1/pattern_1 0.00343524 metacluster_1/pattern_13 0.00336681	Absent
Mbd2	Pattern Name Modisco Significance metacluster_1/pattern_1 0.021844	Absent
Ehf	Pattern Name Modisco Significance metacluster_1/pattern_5 0.0362291	Absent
Uncx	Pattern Name Modisco Significance metacluster_1/pattern_9 0.036853199999999996	Absent
Junb	Pattern Name Modisco Significance metacluster_1/pattern_16 1.45787e-06	Absent
Vsx1	Pattern Name Modisco Significance metacluster_1/pattern_9 0.043975099999999996	Absent
Nfia	Pattern Name Modisco Significance metacluster_1/pattern_2 0.0008066610000000001	Absent
Dbp	Pattern Name Modisco Significance metacluster_1/pattern_8 0.0456745	Absent
Shox2	Pattern Name Modisco Significance metacluster_1/pattern_9 0.0359961	Absent
Batf	Pattern Name Modisco Significance metacluster_1/pattern_16 0.00956646	Absent
Bach2	Pattern Name Modisco Significance metacluster_1/pattern_16 0.000599824	Absent
Etv1	Pattern Name Modisco Significance metacluster_1/pattern_5 0.000952295	Absent
Elf2	Pattern Name Modisco Significance metacluster_1/pattern_5 0.0171965	Absent
Bach1	Pattern Name Modisco Significance metacluster_1/pattern_16 0.00177116	Absent
Tfap2b	Pattern Name Modisco Significance metacluster_1/pattern_1 0.025717200000000003	Absent
Hlf	Pattern Name Modisco Significance metacluster_1/pattern_8 0.021769999999999998	Absent
Alx4	Pattern Name Modisco Significance metacluster_1/pattern_9 0.0428084	Absent
Pax6	Pattern Name Modisco Significance metacluster_1/pattern_9 0.0403923	Absent
Phf21a	Pattern Name Modisco Significance metacluster_1/pattern_9 0.046815699999999995	Absent
Rax	Pattern Name Modisco Significance metacluster_1/pattern_9 0.0303168	Absent
Mxi1	Pattern Name Modisco Significance metacluster_1/pattern_1 0.010387299999999999 metacluster_1/pattern_13 0.0257858	Absent
Lmx1b	Pattern Name Modisco Significance metacluster_1/pattern_9 0.043975099999999996	Absent
Taf1	Pattern Name Modisco Significance metacluster_1/pattern_13 5.08062e-06	Absent
Klf4	Pattern Name Modisco Significance metacluster_1/pattern_1 0.0175531	Absent
Hoxb3	Pattern Name Modisco Significance metacluster_1/pattern_9 0.04984280000000001	Absent
Gabpa	Pattern Name Modisco Significance metacluster_1/pattern_5 0.000952295	Absent
XP_911724.4	Pattern Name Modisco Significance metacluster_1/pattern_5 0.00176625	Absent
Tfe3	Pattern Name Modisco Significance metacluster_1/pattern_8 0.025671199999999998	Absent
Phox2a	Pattern Name Modisco Significance metacluster_1/pattern_9 0.043975099999999996	Absent
Alx1	Pattern Name Modisco Significance metacluster_1/pattern_9 0.0451724	Absent
Wt1	Pattern Name Modisco Significance metacluster_1/pattern_1 9.58115e-06 metacluster_1/pattern_13 0.012141899999999999	Absent
Xbp1	Pattern Name Modisco Significance metacluster_1/pattern_8 0.0525903	Absent
Elf1	Pattern Name Modisco Significance metacluster_1/pattern_5 0.00116868	Absent
Esx1	Pattern Name Modisco Significance metacluster_1/pattern_9 0.03421969999999999	Absent
Fosl1	Pattern Name Modisco Significance metacluster_1/pattern_16 1.45787e-06	Absent
Mef2c	Pattern Name Modisco Significance metacluster_1/pattern_17 3.50168e-07	Absent
Pbx3	Pattern Name Modisco Significance metacluster_1/pattern_6 1.72741e-05	Absent
Mlx	Pattern Name Modisco Significance metacluster_1/pattern_8 0.023091099999999996	Absent
Lhx4	Pattern Name Modisco Significance metacluster_1/pattern_9 0.046795300000000005	Absent
Jund	Pattern Name Modisco Significance metacluster_1/pattern_16 0.014284799999999999	Absent
Nkx1-1	Pattern Name Modisco Significance metacluster_1/pattern_9 0.043975099999999996	Absent
Prop1	Pattern Name Modisco Significance metacluster_1/pattern_9 0.0421697	Absent
Hoxa2	Pattern Name Modisco Significance metacluster_1/pattern_9 0.055491	Absent
Pou5f1	Pattern Name Modisco Significance metacluster_1/pattern_9 0.0531511	Absent
Bhlhe40	Pattern Name Modisco Significance metacluster_1/pattern_8 0.0235793	Absent
Mitf	Pattern Name Modisco Significance metacluster_1/pattern_8 0.0235793	Absent
Fos	Pattern Name Modisco Significance metacluster_1/pattern_16 2.83991e-06	Absent
Elk3	Pattern Name Modisco Significance metacluster_1/pattern_5 0.000729862	Absent
Elk1	Pattern Name Modisco Significance metacluster_1/pattern_5 0.000865157	Absent
Tead4	Pattern Name Modisco Significance metacluster_1/pattern_12 8.26e-05	Absent
Mafb	Pattern Name Modisco Significance metacluster_1/pattern_8 0.036770300000000006	Absent
Alx3	Pattern Name Modisco Significance metacluster_1/pattern_9 0.0428084	Absent
Nhlh1	Pattern Name Modisco Significance metacluster_1/pattern_7 0.00537982	Absent
Prrx1	Pattern Name Modisco Significance metacluster_1/pattern_9 0.0317732	Absent
Cebpa	Pattern Name Modisco Significance metacluster_1/pattern_8 0.0456745	Absent
Fosl2	Pattern Name Modisco Significance metacluster_1/pattern_16 0.000228105	Absent
Evx1	Pattern Name Modisco Significance metacluster_1/pattern_9 0.0403923	Absent
Nfib	Pattern Name Modisco Significance metacluster_1/pattern_2 0.000106104	Absent
Klf1	Pattern Name Modisco Significance metacluster_1/pattern_1 4.60841e-05	Absent
Lhx9	Pattern Name Modisco Significance metacluster_1/pattern_9 0.0303168	Absent
Klf5	Pattern Name Modisco Significance metacluster_1/pattern_1 0.00211103	Absent
Nkx1-2	Pattern Name Modisco Significance metacluster_1/pattern_9 0.0303168	Absent
Rest	Pattern Name Modisco Significance metacluster_1/pattern_18 4.7527999999999994e-14	Absent
Etv3	Pattern Name Modisco Significance metacluster_1/pattern_5 0.00176625	Absent
Sp5	Pattern Name Modisco Significance metacluster_1/pattern_1 0.00211103 metacluster_1/pattern_13 0.0426967	Absent
Gbx2	Pattern Name Modisco Significance metacluster_1/pattern_9 0.0428084	Absent
Tef	Pattern Name Modisco Significance metacluster_1/pattern_8 0.0241457	Absent
Sox17	Pattern Name Modisco Significance metacluster_1/pattern_3 0.00022440400000000002	Absent
Etv5	Pattern Name Modisco Significance metacluster_1/pattern_5 0.00033551699999999997	Absent
Pou1f1	Pattern Name Modisco Significance metacluster_1/pattern_9 0.0403923	Absent
Phox2b	Pattern Name Modisco Significance metacluster_1/pattern_9 0.0317732	Absent
Mafk	Pattern Name Modisco Significance metacluster_1/pattern_16 0.0597001	Absent
Tead1	Pattern Name Modisco Significance metacluster_1/pattern_12 0.000506361	Absent
Mafa	Pattern Name Modisco Significance metacluster_1/pattern_16 0.030530400000000003	Absent
Isl1	Pattern Name Modisco Significance metacluster_1/pattern_9 0.0403923	Absent
Otp	Pattern Name Modisco Significance metacluster_1/pattern_9 0.0303168	Absent
Nfe2l2	Pattern Name Modisco Significance metacluster_1/pattern_16 0.00194887	Absent
Yy1	Pattern Name Modisco Significance metacluster_1/pattern_13 1.85533e-05	Absent
Elf5	Pattern Name Modisco Significance metacluster_1/pattern_5 0.0565996	Absent
Hoxb4	Pattern Name Modisco Significance metacluster_1/pattern_9 0.050105800000000006	Absent
Tcf21	Pattern Name Modisco Significance metacluster_1/pattern_7 0.0436622	Absent
Tead2	Pattern Name Modisco Significance metacluster_1/pattern_12 0.00036356199999999995	Absent
Spi1	Pattern Name Modisco Significance metacluster_1/pattern_5 0.0114929	Absent
Srebf1	Pattern Name Modisco Significance metacluster_1/pattern_8 0.04971130000000001	Absent
Spdef	Pattern Name Modisco Significance metacluster_1/pattern_5 0.025281799999999997	Absent
Ets1	Pattern Name Modisco Significance metacluster_1/pattern_5 0.00118485	Absent
Fosb	Pattern Name Modisco Significance metacluster_1/pattern_16 2.4342e-06	Absent
Gsx2	Pattern Name Modisco Significance metacluster_1/pattern_9 0.0428084	Absent
Egr2	Pattern Name Modisco Significance metacluster_1/pattern_1 0.0190517 metacluster_1/pattern_13 0.0426967	Absent
Tfec	Pattern Name Modisco Significance metacluster_1/pattern_8 0.00781575	Absent
Fli1	Pattern Name Modisco Significance metacluster_1/pattern_1 0.033375800000000004 metacluster_1/pattern_5 0.00121311	Absent
Rhox6	Pattern Name Modisco Significance metacluster_1/pattern_9 0.0303168	Absent
Isx	Pattern Name Modisco Significance metacluster_1/pattern_9 0.0403923	Absent
Pdx1	Pattern Name Modisco Significance metacluster_1/pattern_9 0.0476263	Absent
Hoxc5	Pattern Name Modisco Significance metacluster_1/pattern_9 0.036853199999999996	Absent
Nfyc	Pattern Name Modisco Significance metacluster_1/pattern_6 2.70502e-10	Absent
Erg	Pattern Name Modisco Significance metacluster_1/pattern_5 0.00121311	Absent
Mef2d	Pattern Name Modisco Significance metacluster_1/pattern_17 8.39182e-10	Absent
Etv4	Pattern Name Modisco Significance metacluster_1/pattern_5 0.00552681	Absent
Jun	Pattern Name Modisco Significance metacluster_1/pattern_8 0.022362 metacluster_1/pattern_16 1.17385e-06	Absent
Cebpb	Pattern Name Modisco Significance metacluster_1/pattern_8 0.0456745	Absent
Foxd1	Pattern Name Modisco Significance metacluster_1/pattern_3 0.026622399999999997	Absent
Egr3	Pattern Name Modisco Significance metacluster_1/pattern_1 0.0141061	Absent
Sox12	Pattern Name Modisco Significance metacluster_1/pattern_3 0.029158	Absent
Elf3	Pattern Name Modisco Significance metacluster_1/pattern_5 0.030965899999999998	Absent
Maz	Pattern Name Modisco Significance metacluster_1/pattern_1 0.000111579 metacluster_1/pattern_13 0.0142196	Absent
Noto	Pattern Name Modisco Significance metacluster_1/pattern_9 0.03421969999999999	Absent
Vax1	Pattern Name Modisco Significance metacluster_1/pattern_9 0.043975099999999996	Absent
Nfya	Pattern Name Modisco Significance metacluster_1/pattern_6 2.70502e-10	Absent
Sox6	Pattern Name Modisco Significance metacluster_1/pattern_3 0.00129544	Absent
Lbx2	Pattern Name Modisco Significance metacluster_1/pattern_9 0.0317732	Absent

Unique Homer TFs: #13

TF Name	Modisco	Homer
Zic2	Absent	Pattern Name Homer Significance motif11.motif 0.05612140000000001
Pknox1	Absent	Pattern Name Homer Significance motif11.motif 0.0465999
Prdm9	Absent	Pattern Name Homer Significance motif11.motif 0.0599058
Pknox2	Absent	Pattern Name Homer Significance motif11.motif 0.0227774
E2f3	Absent	Pattern Name Homer Significance motif3.motif 0.05943480000000001
Meis2	Absent	Pattern Name Homer Significance motif11.motif 0.0279158
Meis1	Absent	Pattern Name Homer Significance motif11.motif 0.051936800000000005
Meis3	Absent	Pattern Name Homer Significance motif11.motif 0.0587276
Hey2	Absent	Pattern Name Homer Significance motif11.motif 0.0599058
E2f7	Absent	Pattern Name Homer Significance motif3.motif 0.00340224
Nfkb1	Absent	Pattern Name Homer Significance motif20.motif 0.05460790000000001
Zbtb33	Absent	Pattern Name Homer Significance motif22.motif 0.00202901
Rela	Absent	Pattern Name Homer Significance motif20.motif 0.05460790000000001