# Parameters
data_name = "aNonTfh_mut;A;CL"
modisco_root = "/srv/scratch/msharmin/mouse_hem/with_tfd/full_mouse50/Naive_modisco2019"
tomtom_report_root = "http://mitra.stanford.edu/kundaje/msharmin/report/tomtom_outs/cells"
task_dir = "task_27-naivegw"
perf_file = "/srv/scratch/msharmin/mouse_hem/with_tfd/full_mouse50/fineFactorized/task_27-naivegw/NaiveauPRC.txt"
homer_root = "/srv/scratch/msharmin/mouse_hem/with_tfd/full_mouse50/Naive_scans"
reportfile = "/mnt/lab_data/kundaje/msharmin/annotations/filtering samples_MS2.xlsx"
sheetname = "filter23"

from matlas.reports import display_metadata

load data from labcluster

Using TensorFlow backend.
2019-08-30 18:45:26,870 [WARNING] git-lfs not installed

display_metadata(data_name, perf_file, reportfile, sheetname)

Sample Information

MetaData Name	Description
Cell type	activated non-Tfh (CD4+CD44+CXCR5-PD1-CD25-) MUT
Cell Group	T cells
Experiment Name	ATAC
Experiment Group	Casellas Lab

Pipeline Output

replicate	Naïve overlap peaks	IDR peaks	TSS enrichment (< 8 is very poor <10 is low)	Final number of unique mapping, dup-filtered, chrM filtered reads	Number of reads in called peak regions	Fraction of reads in called peak regions	Number of reads in promoter regions	Fraction of reads in promoter regions	Number of reads in enhancer regions	Fraction of reads in enhancer regions
rep1	88536	69498	13.7416	45981127	8039535	0.1749	6302869	0.1371	14063004	0.306

Modelling Metadata

Metric	Value
auPRC	0.6141
Calibrated Recall at 50% FDR	0.205
Number of Positive Examples in Test Data	79301
Number of Negative Examples in Test Data	7991550
Imbalance Ratio in Test Data	0.0098
Test Chromosomes	chr2, chr3, chr19

from matlas.reports import display_paiwise_pattern_comparison
from matlas.reports import display_denovo_patterns

display_denovo_patterns(data_name, modisco_root=modisco_root)

TF-MoDISco is using the TensorFlow backend.

The following two links show list of Denovo Patterns and corresponding Motifs discovered by TF-MoDISco

Click here for Denovo Patterns by TF-MoDISco: #19

Pattern Name	TF Name(s)	Modisco
metacluster_1/pattern_0 # seqlets: 5694 SequenceContrib ScoresHyp_Contrib Scores	Ctcf, Ctcfl
metacluster_1/pattern_1 # seqlets: 4944 SequenceContrib ScoresHyp_Contrib Scores	Ets1, Erg, Fli1, Gabpa, Elk4, Elk1, Etv4, Etv2, Etv5, Elk3, Fev, Spi1, Etv6, Etv1, Etv3, XP_911724.4, Elf2, Elf1, Elf4, Spib, Ehf, Elf5, Spdef, Elf3, Spic, Irf8, Irf4, Stat3, Zscan10, Stat4
metacluster_1/pattern_2 # seqlets: 4033 SequenceContrib ScoresHyp_Contrib Scores	Sp2, Sp3, Sp1, Klf3, Sp4, Klf4, E2f4, Klf6, Egr1, Klf5, Sp5, Zbtb17, Klf7, Klf8, Klf12, Wt1, Egr2, Zfp281, Klf1, Maz, E2f1, Klf15, Egr3, Srebf2, Sall4
metacluster_1/pattern_3 # seqlets: 1544 SequenceContrib ScoresHyp_Contrib Scores	Nfyb, Nfyc, Nfya, Foxi1, Pbx3
metacluster_1/pattern_4 # seqlets: 1488 SequenceContrib ScoresHyp_Contrib Scores	Irf1, Irf2, Stat1, Irf7, Prdm1, Stat2, Irf9, Irf3, Batf3
metacluster_1/pattern_5 # seqlets: 1321 SequenceContrib ScoresHyp_Contrib Scores	Nrf1
metacluster_1/pattern_6 # seqlets: 968 SequenceContrib ScoresHyp_Contrib Scores	Creb1, Jdp2, Atf2, Atf7, Creb5, Crem, Atf1, Atf3, Mafb, Fosl2, Fosl1, Jun, Nfil3, Tef, Hlf, Dbp, Tfe3, Gmeb2, Cebpg, Rorb
metacluster_1/pattern_7 # seqlets: 880 SequenceContrib ScoresHyp_Contrib Scores	Taf1, Yy1, Zfx, Zfp42, Rfx1, Mxi1
metacluster_1/pattern_8 # seqlets: 818 SequenceContrib ScoresHyp_Contrib Scores	Thap11, Zfp143, Tbx2
metacluster_1/pattern_9 # seqlets: 666 SequenceContrib ScoresHyp_Contrib Scores
metacluster_1/pattern_10 # seqlets: 653 SequenceContrib ScoresHyp_Contrib Scores	Usf1, Usf2, Tfeb, Arntl, Mitf, Tfec, Clock, Srebf1, Bhlhe40, Arnt, Mlx, Npas2, Mycn, Creb3l2, Max, Tcfl5, Myc, Bhlhe41, Xbp1, Rarg
metacluster_1/pattern_11 # seqlets: 556 SequenceContrib ScoresHyp_Contrib Scores	Runx1, Runx2, Runx3, Cbfb, Gfi1b
metacluster_1/pattern_12 # seqlets: 415 SequenceContrib ScoresHyp_Contrib Scores	Rfx3, Rfx2, Rfx4, Rfx7, Rfx6, Sox2, Pou5f1
metacluster_1/pattern_13 # seqlets: 403 SequenceContrib ScoresHyp_Contrib Scores	Fos, Jund, Batf, Fosb, Junb, Bach2, Bach1, Nfe2l2, Nfe2, Mafa, Mafk, Mafg, Maff, Maf
metacluster_1/pattern_14 # seqlets: 153 SequenceContrib ScoresHyp_Contrib Scores	Nfkb2, Nfkb1, Rela, Relb, Rel
metacluster_1/pattern_15 # seqlets: 112 SequenceContrib ScoresHyp_Contrib Scores	Zbtb33
metacluster_1/pattern_16 # seqlets: 102 SequenceContrib ScoresHyp_Contrib Scores
metacluster_1/pattern_17 # seqlets: 72 SequenceContrib ScoresHyp_Contrib Scores	Nfib, Nfia, Nfic
metacluster_1/pattern_18 # seqlets: 64 SequenceContrib ScoresHyp_Contrib Scores

Click here for Motifs by TF-MoDISco: #156

TF Name	Pattern(s)
Ctcf	Pattern Name Modisco Significance metacluster_1/pattern_0 2.79619e-15
Ctcfl	Pattern Name Modisco Significance metacluster_1/pattern_0 6.52506e-08
Ets1	Pattern Name Modisco Significance metacluster_1/pattern_1 0.000910385 metacluster_1/pattern_9 0.047787300000000005
Erg	Pattern Name Modisco Significance metacluster_1/pattern_1 0.000910385
Fli1	Pattern Name Modisco Significance metacluster_1/pattern_1 0.000910385
Gabpa	Pattern Name Modisco Significance metacluster_1/pattern_1 0.000910385
Elk4	Pattern Name Modisco Significance metacluster_1/pattern_1 0.000992723
Elk1	Pattern Name Modisco Significance metacluster_1/pattern_1 0.000910385
Etv4	Pattern Name Modisco Significance metacluster_1/pattern_1 0.000910385
Etv2	Pattern Name Modisco Significance metacluster_1/pattern_1 3.35962e-05
Etv5	Pattern Name Modisco Significance metacluster_1/pattern_1 0.000321813
Elk3	Pattern Name Modisco Significance metacluster_1/pattern_1 0.000910385
Fev	Pattern Name Modisco Significance metacluster_1/pattern_1 0.0007204819999999999
Spi1	Pattern Name Modisco Significance metacluster_1/pattern_1 0.0512506
Etv6	Pattern Name Modisco Significance metacluster_1/pattern_1 0.000910385
Etv1	Pattern Name Modisco Significance metacluster_1/pattern_1 0.00103846
Etv3	Pattern Name Modisco Significance metacluster_1/pattern_1 0.000910385
XP_911724.4	Pattern Name Modisco Significance metacluster_1/pattern_1 0.000910385
Elf2	Pattern Name Modisco Significance metacluster_1/pattern_1 0.00679186
Elf1	Pattern Name Modisco Significance metacluster_1/pattern_1 0.00210283
Elf4	Pattern Name Modisco Significance metacluster_1/pattern_1 0.00391188
Spib	Pattern Name Modisco Significance metacluster_1/pattern_1 0.00468124 metacluster_1/pattern_4 0.00105375
Ehf	Pattern Name Modisco Significance metacluster_1/pattern_1 0.00654154
Elf5	Pattern Name Modisco Significance metacluster_1/pattern_1 0.0231718
Spdef	Pattern Name Modisco Significance metacluster_1/pattern_1 0.0160529
Elf3	Pattern Name Modisco Significance metacluster_1/pattern_1 0.018377
Spic	Pattern Name Modisco Significance metacluster_1/pattern_1 0.021236900000000003
Irf8	Pattern Name Modisco Significance metacluster_1/pattern_1 0.0231718 metacluster_1/pattern_4 2.8939599999999995e-06
Irf4	Pattern Name Modisco Significance metacluster_1/pattern_1 0.0239188 metacluster_1/pattern_4 0.012537999999999999
Stat3	Pattern Name Modisco Significance metacluster_1/pattern_1 0.0512506
Zscan10	Pattern Name Modisco Significance metacluster_1/pattern_1 0.046228899999999996
Stat4	Pattern Name Modisco Significance metacluster_1/pattern_1 0.058782799999999996
Sp2	Pattern Name Modisco Significance metacluster_1/pattern_2 9.043919999999999e-09 metacluster_1/pattern_7 0.00011118 metacluster_1/pattern_15 0.00161377
Sp3	Pattern Name Modisco Significance metacluster_1/pattern_2 4.78463e-08 metacluster_1/pattern_7 0.000257656 metacluster_1/pattern_15 0.00236754
Sp1	Pattern Name Modisco Significance metacluster_1/pattern_2 0.000403692 metacluster_1/pattern_7 0.000116666 metacluster_1/pattern_15 0.000384206
Klf3	Pattern Name Modisco Significance metacluster_1/pattern_2 4.0305300000000003e-07 metacluster_1/pattern_7 0.0310915
Sp4	Pattern Name Modisco Significance metacluster_1/pattern_2 0.0012954000000000002 metacluster_1/pattern_7 0.048338099999999995
Klf4	Pattern Name Modisco Significance metacluster_1/pattern_2 0.0012954000000000002
E2f4	Pattern Name Modisco Significance metacluster_1/pattern_2 0.000361961
Klf6	Pattern Name Modisco Significance metacluster_1/pattern_2 0.000361961
Egr1	Pattern Name Modisco Significance metacluster_1/pattern_2 0.044839699999999996
Klf5	Pattern Name Modisco Significance metacluster_1/pattern_2 0.000686037
Sp5	Pattern Name Modisco Significance metacluster_1/pattern_2 0.000766588
Zbtb17	Pattern Name Modisco Significance metacluster_1/pattern_2 0.000964212 metacluster_1/pattern_7 0.015392700000000002
Klf7	Pattern Name Modisco Significance metacluster_1/pattern_2 0.000964212
Klf8	Pattern Name Modisco Significance metacluster_1/pattern_2 0.00149041
Klf12	Pattern Name Modisco Significance metacluster_1/pattern_2 0.00177923
Wt1	Pattern Name Modisco Significance metacluster_1/pattern_2 0.00235744 metacluster_1/pattern_7 0.0230932
Egr2	Pattern Name Modisco Significance metacluster_1/pattern_2 0.039722 metacluster_1/pattern_7 0.0391435
Zfp281	Pattern Name Modisco Significance metacluster_1/pattern_2 0.00465787
Klf1	Pattern Name Modisco Significance metacluster_1/pattern_2 0.0274681
Maz	Pattern Name Modisco Significance metacluster_1/pattern_2 0.00768992 metacluster_1/pattern_7 0.0357816
E2f1	Pattern Name Modisco Significance metacluster_1/pattern_2 0.0187886
Klf15	Pattern Name Modisco Significance metacluster_1/pattern_2 0.022853799999999997
Egr3	Pattern Name Modisco Significance metacluster_1/pattern_2 0.035981
Srebf2	Pattern Name Modisco Significance metacluster_1/pattern_2 0.0404902 metacluster_1/pattern_10 0.009175
Sall4	Pattern Name Modisco Significance metacluster_1/pattern_2 0.044839699999999996
Nfyb	Pattern Name Modisco Significance metacluster_1/pattern_3 1.0013299999999998e-15
Nfyc	Pattern Name Modisco Significance metacluster_1/pattern_3 4.3291199999999997e-10
Nfya	Pattern Name Modisco Significance metacluster_1/pattern_3 1.4664100000000003e-09
Foxi1	Pattern Name Modisco Significance metacluster_1/pattern_3 9.412309999999999e-07
Pbx3	Pattern Name Modisco Significance metacluster_1/pattern_3 5.42765e-06
Irf1	Pattern Name Modisco Significance metacluster_1/pattern_4 1.74485e-16
Irf2	Pattern Name Modisco Significance metacluster_1/pattern_4 0.00105375
Stat1	Pattern Name Modisco Significance metacluster_1/pattern_4 9.87358e-06
Irf7	Pattern Name Modisco Significance metacluster_1/pattern_4 3.34124e-05
Prdm1	Pattern Name Modisco Significance metacluster_1/pattern_4 0.000139965
Stat2	Pattern Name Modisco Significance metacluster_1/pattern_4 0.000430069
Irf9	Pattern Name Modisco Significance metacluster_1/pattern_4 0.00111461
Irf3	Pattern Name Modisco Significance metacluster_1/pattern_4 0.00111461
Batf3	Pattern Name Modisco Significance metacluster_1/pattern_4 0.012117000000000001
Nrf1	Pattern Name Modisco Significance metacluster_1/pattern_5 6.56607e-08
Creb1	Pattern Name Modisco Significance metacluster_1/pattern_6 0.000445514 metacluster_1/pattern_10 0.028449900000000004
Jdp2	Pattern Name Modisco Significance metacluster_1/pattern_6 0.000169137 metacluster_1/pattern_13 0.00014111
Atf2	Pattern Name Modisco Significance metacluster_1/pattern_6 0.000445514
Atf7	Pattern Name Modisco Significance metacluster_1/pattern_6 0.000155558 metacluster_1/pattern_10 0.0510906
Creb5	Pattern Name Modisco Significance metacluster_1/pattern_6 0.000122542
Crem	Pattern Name Modisco Significance metacluster_1/pattern_6 0.00234527
Atf1	Pattern Name Modisco Significance metacluster_1/pattern_6 0.0201939 metacluster_1/pattern_10 0.025506
Atf3	Pattern Name Modisco Significance metacluster_1/pattern_6 0.00765799 metacluster_1/pattern_13 0.00014111
Mafb	Pattern Name Modisco Significance metacluster_1/pattern_6 0.00234527 metacluster_1/pattern_13 0.0294515
Fosl2	Pattern Name Modisco Significance metacluster_1/pattern_6 0.00642708 metacluster_1/pattern_13 2.65839e-06
Fosl1	Pattern Name Modisco Significance metacluster_1/pattern_6 0.00660142 metacluster_1/pattern_13 0.00695191
Jun	Pattern Name Modisco Significance metacluster_1/pattern_6 0.0320699 metacluster_1/pattern_13 0.0408024
Nfil3	Pattern Name Modisco Significance metacluster_1/pattern_6 0.00844357
Tef	Pattern Name Modisco Significance metacluster_1/pattern_6 0.0125773
Hlf	Pattern Name Modisco Significance metacluster_1/pattern_6 0.0213917
Dbp	Pattern Name Modisco Significance metacluster_1/pattern_6 0.036052499999999994
Tfe3	Pattern Name Modisco Significance metacluster_1/pattern_6 0.0372634 metacluster_1/pattern_10 0.00047549800000000003
Gmeb2	Pattern Name Modisco Significance metacluster_1/pattern_6 0.049525599999999996
Cebpg	Pattern Name Modisco Significance metacluster_1/pattern_6 0.05250740000000001
Rorb	Pattern Name Modisco Significance metacluster_1/pattern_6 0.0529586
Taf1	Pattern Name Modisco Significance metacluster_1/pattern_7 3.27634e-06
Yy1	Pattern Name Modisco Significance metacluster_1/pattern_7 5.68094e-06
Zfx	Pattern Name Modisco Significance metacluster_1/pattern_7 0.00326078 metacluster_1/pattern_15 0.000163556
Zfp42	Pattern Name Modisco Significance metacluster_1/pattern_7 0.015392700000000002
Rfx1	Pattern Name Modisco Significance metacluster_1/pattern_7 0.015466800000000001 metacluster_1/pattern_12 1.54912e-09
Mxi1	Pattern Name Modisco Significance metacluster_1/pattern_7 0.05078219999999999
Thap11	Pattern Name Modisco Significance metacluster_1/pattern_8 5.3124e-22
Zfp143	Pattern Name Modisco Significance metacluster_1/pattern_8 2.57681e-21
Tbx2	Pattern Name Modisco Significance metacluster_1/pattern_8 1.22707e-13
Usf1	Pattern Name Modisco Significance metacluster_1/pattern_10 0.0114916
Usf2	Pattern Name Modisco Significance metacluster_1/pattern_10 0.00287501
Tfeb	Pattern Name Modisco Significance metacluster_1/pattern_10 0.00025623599999999996
Arntl	Pattern Name Modisco Significance metacluster_1/pattern_10 0.010006000000000001
Mitf	Pattern Name Modisco Significance metacluster_1/pattern_10 0.00043872199999999995
Tfec	Pattern Name Modisco Significance metacluster_1/pattern_10 0.00047549800000000003
Clock	Pattern Name Modisco Significance metacluster_1/pattern_10 0.00974177
Srebf1	Pattern Name Modisco Significance metacluster_1/pattern_10 0.027934800000000003
Bhlhe40	Pattern Name Modisco Significance metacluster_1/pattern_10 0.0220746
Arnt	Pattern Name Modisco Significance metacluster_1/pattern_10 0.00126565
Mlx	Pattern Name Modisco Significance metacluster_1/pattern_10 0.00567084
Npas2	Pattern Name Modisco Significance metacluster_1/pattern_10 0.00270431
Mycn	Pattern Name Modisco Significance metacluster_1/pattern_10 0.0571226
Creb3l2	Pattern Name Modisco Significance metacluster_1/pattern_10 0.0196533
Max	Pattern Name Modisco Significance metacluster_1/pattern_10 0.014719999999999999
Tcfl5	Pattern Name Modisco Significance metacluster_1/pattern_10 0.0151144
Myc	Pattern Name Modisco Significance metacluster_1/pattern_10 0.0158451
Bhlhe41	Pattern Name Modisco Significance metacluster_1/pattern_10 0.0295185
Xbp1	Pattern Name Modisco Significance metacluster_1/pattern_10 0.0359766
Rarg	Pattern Name Modisco Significance metacluster_1/pattern_10 0.038069
Runx1	Pattern Name Modisco Significance metacluster_1/pattern_11 5.6593100000000005e-05
Runx2	Pattern Name Modisco Significance metacluster_1/pattern_11 0.0105479
Runx3	Pattern Name Modisco Significance metacluster_1/pattern_11 0.00028462400000000003
Cbfb	Pattern Name Modisco Significance metacluster_1/pattern_11 0.00166074
Gfi1b	Pattern Name Modisco Significance metacluster_1/pattern_11 0.023618200000000002
Rfx3	Pattern Name Modisco Significance metacluster_1/pattern_12 0.0004958030000000001
Rfx2	Pattern Name Modisco Significance metacluster_1/pattern_12 0.00811107
Rfx4	Pattern Name Modisco Significance metacluster_1/pattern_12 4.6592200000000004e-05
Rfx7	Pattern Name Modisco Significance metacluster_1/pattern_12 0.000280348
Rfx6	Pattern Name Modisco Significance metacluster_1/pattern_12 0.000970182
Sox2	Pattern Name Modisco Significance metacluster_1/pattern_12 0.0321861
Pou5f1	Pattern Name Modisco Significance metacluster_1/pattern_12 0.037540699999999996
Fos	Pattern Name Modisco Significance metacluster_1/pattern_13 2.65839e-06
Jund	Pattern Name Modisco Significance metacluster_1/pattern_13 0.00469556
Batf	Pattern Name Modisco Significance metacluster_1/pattern_13 0.040288
Fosb	Pattern Name Modisco Significance metacluster_1/pattern_13 9.016430000000001e-05
Junb	Pattern Name Modisco Significance metacluster_1/pattern_13 0.019199400000000002
Bach2	Pattern Name Modisco Significance metacluster_1/pattern_13 0.00121773
Bach1	Pattern Name Modisco Significance metacluster_1/pattern_13 0.0021208000000000004
Nfe2l2	Pattern Name Modisco Significance metacluster_1/pattern_13 0.00314191
Nfe2	Pattern Name Modisco Significance metacluster_1/pattern_13 0.00271878
Mafa	Pattern Name Modisco Significance metacluster_1/pattern_13 0.00452375
Mafk	Pattern Name Modisco Significance metacluster_1/pattern_13 0.0196857
Mafg	Pattern Name Modisco Significance metacluster_1/pattern_13 0.0352216
Maff	Pattern Name Modisco Significance metacluster_1/pattern_13 0.0433221
Maf	Pattern Name Modisco Significance metacluster_1/pattern_13 0.052266999999999994
Nfkb2	Pattern Name Modisco Significance metacluster_1/pattern_14 2.82916e-07
Nfkb1	Pattern Name Modisco Significance metacluster_1/pattern_14 1.3625599999999999e-05
Rela	Pattern Name Modisco Significance metacluster_1/pattern_14 0.000165088
Relb	Pattern Name Modisco Significance metacluster_1/pattern_14 5.42907e-05
Rel	Pattern Name Modisco Significance metacluster_1/pattern_14 0.0204134
Zbtb33	Pattern Name Modisco Significance metacluster_1/pattern_15 7.75922e-05
Nfib	Pattern Name Modisco Significance metacluster_1/pattern_17 7.79931e-05
Nfia	Pattern Name Modisco Significance metacluster_1/pattern_17 7.79931e-05
Nfic	Pattern Name Modisco Significance metacluster_1/pattern_17 0.00674112

display_paiwise_pattern_comparison(data_name, modisco_root, homer_root)

Number of CISBP TFs obtained by TF-MoDISco and Homer

Shared TFs between TF-MoDISco and Homer: #66

TF Name	Modisco	Homer
Klf1	Pattern Name Modisco Significance metacluster_1/pattern_2 0.0274681	Pattern Name Homer Significance motif3.motif 0.0332659
E2f1	Pattern Name Modisco Significance metacluster_1/pattern_2 0.0187886	Pattern Name Homer Significance motif3.motif 0.0389602
Elk3	Pattern Name Modisco Significance metacluster_1/pattern_1 0.000910385	Pattern Name Homer Significance motif2.motif 0.00029251099999999996
Taf1	Pattern Name Modisco Significance metacluster_1/pattern_7 3.27634e-06	Pattern Name Homer Significance motif11.motif 6.10511e-05
Irf7	Pattern Name Modisco Significance metacluster_1/pattern_4 3.34124e-05	Pattern Name Homer Significance motif15.motif 0.00129667
Stat2	Pattern Name Modisco Significance metacluster_1/pattern_4 0.000430069	Pattern Name Homer Significance motif15.motif 0.0149829
Fev	Pattern Name Modisco Significance metacluster_1/pattern_1 0.0007204819999999999	Pattern Name Homer Significance motif2.motif 0.00291477
Fli1	Pattern Name Modisco Significance metacluster_1/pattern_1 0.000910385	Pattern Name Homer Significance motif2.motif 0.000159463
Egr1	Pattern Name Modisco Significance metacluster_1/pattern_2 0.044839699999999996	Pattern Name Homer Significance motif3.motif 0.0158584
Klf12	Pattern Name Modisco Significance metacluster_1/pattern_2 0.00177923	Pattern Name Homer Significance motif3.motif 0.00974027
Klf7	Pattern Name Modisco Significance metacluster_1/pattern_2 0.000964212	Pattern Name Homer Significance motif3.motif 0.000303443
Sp2	Pattern Name Modisco Significance metacluster_1/pattern_2 9.043919999999999e-09 metacluster_1/pattern_7 0.00011118 metacluster_1/pattern_15 0.00161377	Pattern Name Homer Significance motif3.motif 2.6727e-06
Klf3	Pattern Name Modisco Significance metacluster_1/pattern_2 4.0305300000000003e-07 metacluster_1/pattern_7 0.0310915	Pattern Name Homer Significance motif3.motif 6.6330700000000005e-06
Irf8	Pattern Name Modisco Significance metacluster_1/pattern_1 0.0231718 metacluster_1/pattern_4 2.8939599999999995e-06	Pattern Name Homer Significance motif15.motif 0.0235096
Klf5	Pattern Name Modisco Significance metacluster_1/pattern_2 0.000686037	Pattern Name Homer Significance motif3.motif 0.0158584
Etv1	Pattern Name Modisco Significance metacluster_1/pattern_1 0.00103846	Pattern Name Homer Significance motif2.motif 1.54495e-07
Nfyb	Pattern Name Modisco Significance metacluster_1/pattern_3 1.0013299999999998e-15	Pattern Name Homer Significance motif7.motif 1.32419e-07
Irf9	Pattern Name Modisco Significance metacluster_1/pattern_4 0.00111461	Pattern Name Homer Significance motif15.motif 0.00791385
Ctcf	Pattern Name Modisco Significance metacluster_1/pattern_0 2.79619e-15	Pattern Name Homer Significance motif1.motif 0.000602861
Elf4	Pattern Name Modisco Significance metacluster_1/pattern_1 0.00391188	Pattern Name Homer Significance motif2.motif 0.000758462
Irf3	Pattern Name Modisco Significance metacluster_1/pattern_4 0.00111461	Pattern Name Homer Significance motif15.motif 0.0254163
Zbtb17	Pattern Name Modisco Significance metacluster_1/pattern_2 0.000964212 metacluster_1/pattern_7 0.015392700000000002	Pattern Name Homer Significance motif3.motif 0.0177822
Etv6	Pattern Name Modisco Significance metacluster_1/pattern_1 0.000910385	Pattern Name Homer Significance motif2.motif 0.00788324
Nfyc	Pattern Name Modisco Significance metacluster_1/pattern_3 4.3291199999999997e-10	Pattern Name Homer Significance motif7.motif 6.058150000000001e-06
Zfp143	Pattern Name Modisco Significance metacluster_1/pattern_8 2.57681e-21	Pattern Name Homer Significance motif5.motif 7.64851e-06
Foxi1	Pattern Name Modisco Significance metacluster_1/pattern_3 9.412309999999999e-07	Pattern Name Homer Significance motif7.motif 0.000959582
Ctcfl	Pattern Name Modisco Significance metacluster_1/pattern_0 6.52506e-08	Pattern Name Homer Significance motif1.motif 0.0011013
Tbx2	Pattern Name Modisco Significance metacluster_1/pattern_8 1.22707e-13	Pattern Name Homer Significance motif5.motif 2.9809000000000002e-05
Prdm1	Pattern Name Modisco Significance metacluster_1/pattern_4 0.000139965	Pattern Name Homer Significance motif15.motif 0.000470912
Etv2	Pattern Name Modisco Significance metacluster_1/pattern_1 3.35962e-05	Pattern Name Homer Significance motif2.motif 0.000530114
Klf15	Pattern Name Modisco Significance metacluster_1/pattern_2 0.022853799999999997	Pattern Name Homer Significance motif3.motif 0.0389602
Nrf1	Pattern Name Modisco Significance metacluster_1/pattern_5 6.56607e-08	Pattern Name Homer Significance motif9.motif 1.50823e-05
Gabpa	Pattern Name Modisco Significance metacluster_1/pattern_1 0.000910385	Pattern Name Homer Significance motif2.motif 0.00291139
Elf1	Pattern Name Modisco Significance metacluster_1/pattern_1 0.00210283	Pattern Name Homer Significance motif2.motif 0.00208729
Ets1	Pattern Name Modisco Significance metacluster_1/pattern_1 0.000910385 metacluster_1/pattern_9 0.047787300000000005	Pattern Name Homer Significance motif2.motif 9.71389e-06
Thap11	Pattern Name Modisco Significance metacluster_1/pattern_8 5.3124e-22	Pattern Name Homer Significance motif5.motif 2.69435e-06
Stat1	Pattern Name Modisco Significance metacluster_1/pattern_4 9.87358e-06	Pattern Name Homer Significance motif15.motif 0.0235096
Nfya	Pattern Name Modisco Significance metacluster_1/pattern_3 1.4664100000000003e-09	Pattern Name Homer Significance motif7.motif 3.21422e-06
Pbx3	Pattern Name Modisco Significance metacluster_1/pattern_3 5.42765e-06	Pattern Name Homer Significance motif7.motif 0.000511143
Spdef	Pattern Name Modisco Significance metacluster_1/pattern_1 0.0160529	Pattern Name Homer Significance motif2.motif 0.0221252
Elf5	Pattern Name Modisco Significance metacluster_1/pattern_1 0.0231718	Pattern Name Homer Significance motif2.motif 0.0139815
Elf3	Pattern Name Modisco Significance metacluster_1/pattern_1 0.018377	Pattern Name Homer Significance motif2.motif 0.0130995
Sp1	Pattern Name Modisco Significance metacluster_1/pattern_2 0.000403692 metacluster_1/pattern_7 0.000116666 metacluster_1/pattern_15 0.000384206	Pattern Name Homer Significance motif3.motif 0.00974027
Sp3	Pattern Name Modisco Significance metacluster_1/pattern_2 4.78463e-08 metacluster_1/pattern_7 0.000257656 metacluster_1/pattern_15 0.00236754	Pattern Name Homer Significance motif3.motif 7.3240600000000005e-06
Elf2	Pattern Name Modisco Significance metacluster_1/pattern_1 0.00679186	Pattern Name Homer Significance motif2.motif 0.00939868
E2f4	Pattern Name Modisco Significance metacluster_1/pattern_2 0.000361961	Pattern Name Homer Significance motif3.motif 0.00191291
Irf2	Pattern Name Modisco Significance metacluster_1/pattern_4 0.00105375	Pattern Name Homer Significance motif15.motif 0.000470912
Klf4	Pattern Name Modisco Significance metacluster_1/pattern_2 0.0012954000000000002	Pattern Name Homer Significance motif3.motif 0.0483033
Zfp42	Pattern Name Modisco Significance metacluster_1/pattern_7 0.015392700000000002	Pattern Name Homer Significance motif11.motif 0.00445489
Klf8	Pattern Name Modisco Significance metacluster_1/pattern_2 0.00149041	Pattern Name Homer Significance motif3.motif 0.00062619
Etv3	Pattern Name Modisco Significance metacluster_1/pattern_1 0.000910385	Pattern Name Homer Significance motif2.motif 2.40759e-05
Zbtb33	Pattern Name Modisco Significance metacluster_1/pattern_15 7.75922e-05	Pattern Name Homer Significance motif12.motif 0.00208262
Irf4	Pattern Name Modisco Significance metacluster_1/pattern_1 0.0239188 metacluster_1/pattern_4 0.012537999999999999	Pattern Name Homer Significance motif15.motif 0.053745600000000004
Klf6	Pattern Name Modisco Significance metacluster_1/pattern_2 0.000361961	Pattern Name Homer Significance motif3.motif 0.000243014
Irf1	Pattern Name Modisco Significance metacluster_1/pattern_4 1.74485e-16	Pattern Name Homer Significance motif15.motif 0.00129667
Etv4	Pattern Name Modisco Significance metacluster_1/pattern_1 0.000910385	Pattern Name Homer Significance motif2.motif 0.00360978
Yy1	Pattern Name Modisco Significance metacluster_1/pattern_7 5.68094e-06	Pattern Name Homer Significance motif11.motif 1.00066e-07
Erg	Pattern Name Modisco Significance metacluster_1/pattern_1 0.000910385	Pattern Name Homer Significance motif2.motif 8.85487e-07
Etv5	Pattern Name Modisco Significance metacluster_1/pattern_1 0.000321813	Pattern Name Homer Significance motif2.motif 2.03918e-06
XP_911724.4	Pattern Name Modisco Significance metacluster_1/pattern_1 0.000910385	Pattern Name Homer Significance motif2.motif 2.79531e-05
Ehf	Pattern Name Modisco Significance metacluster_1/pattern_1 0.00654154	Pattern Name Homer Significance motif2.motif 0.000897192
Sp4	Pattern Name Modisco Significance metacluster_1/pattern_2 0.0012954000000000002 metacluster_1/pattern_7 0.048338099999999995	Pattern Name Homer Significance motif3.motif 0.0205104
Elk4	Pattern Name Modisco Significance metacluster_1/pattern_1 0.000992723	Pattern Name Homer Significance motif2.motif 8.85487e-07
Spib	Pattern Name Modisco Significance metacluster_1/pattern_1 0.00468124 metacluster_1/pattern_4 0.00105375	Pattern Name Homer Significance motif15.motif 0.0254163
Spic	Pattern Name Modisco Significance metacluster_1/pattern_1 0.021236900000000003	Pattern Name Homer Significance motif2.motif 0.0187465
Elk1	Pattern Name Modisco Significance metacluster_1/pattern_1 0.000910385	Pattern Name Homer Significance motif2.motif 0.000259846

Unique TF-MoDISco TFs: #90

TF Name	Modisco	Homer
Fosl1	Pattern Name Modisco Significance metacluster_1/pattern_6 0.00660142 metacluster_1/pattern_13 0.00695191	Absent
Bach1	Pattern Name Modisco Significance metacluster_1/pattern_13 0.0021208000000000004	Absent
Mlx	Pattern Name Modisco Significance metacluster_1/pattern_10 0.00567084	Absent
Nfe2	Pattern Name Modisco Significance metacluster_1/pattern_13 0.00271878	Absent
Mafa	Pattern Name Modisco Significance metacluster_1/pattern_13 0.00452375	Absent
Stat3	Pattern Name Modisco Significance metacluster_1/pattern_1 0.0512506	Absent
Usf2	Pattern Name Modisco Significance metacluster_1/pattern_10 0.00287501	Absent
Jund	Pattern Name Modisco Significance metacluster_1/pattern_13 0.00469556	Absent
Zscan10	Pattern Name Modisco Significance metacluster_1/pattern_1 0.046228899999999996	Absent
Mafk	Pattern Name Modisco Significance metacluster_1/pattern_13 0.0196857	Absent
Creb5	Pattern Name Modisco Significance metacluster_1/pattern_6 0.000122542	Absent
Wt1	Pattern Name Modisco Significance metacluster_1/pattern_2 0.00235744 metacluster_1/pattern_7 0.0230932	Absent
Nfe2l2	Pattern Name Modisco Significance metacluster_1/pattern_13 0.00314191	Absent
Sox2	Pattern Name Modisco Significance metacluster_1/pattern_12 0.0321861	Absent
Mafg	Pattern Name Modisco Significance metacluster_1/pattern_13 0.0352216	Absent
Sall4	Pattern Name Modisco Significance metacluster_1/pattern_2 0.044839699999999996	Absent
Rfx2	Pattern Name Modisco Significance metacluster_1/pattern_12 0.00811107	Absent
Gmeb2	Pattern Name Modisco Significance metacluster_1/pattern_6 0.049525599999999996	Absent
Rfx1	Pattern Name Modisco Significance metacluster_1/pattern_7 0.015466800000000001 metacluster_1/pattern_12 1.54912e-09	Absent
Rel	Pattern Name Modisco Significance metacluster_1/pattern_14 0.0204134	Absent
Tfeb	Pattern Name Modisco Significance metacluster_1/pattern_10 0.00025623599999999996	Absent
Tfec	Pattern Name Modisco Significance metacluster_1/pattern_10 0.00047549800000000003	Absent
Nfia	Pattern Name Modisco Significance metacluster_1/pattern_17 7.79931e-05	Absent
Fos	Pattern Name Modisco Significance metacluster_1/pattern_13 2.65839e-06	Absent
Zfx	Pattern Name Modisco Significance metacluster_1/pattern_7 0.00326078 metacluster_1/pattern_15 0.000163556	Absent
Srebf2	Pattern Name Modisco Significance metacluster_1/pattern_2 0.0404902 metacluster_1/pattern_10 0.009175	Absent
Bhlhe41	Pattern Name Modisco Significance metacluster_1/pattern_10 0.0295185	Absent
Creb3l2	Pattern Name Modisco Significance metacluster_1/pattern_10 0.0196533	Absent
Gfi1b	Pattern Name Modisco Significance metacluster_1/pattern_11 0.023618200000000002	Absent
Rfx4	Pattern Name Modisco Significance metacluster_1/pattern_12 4.6592200000000004e-05	Absent
Usf1	Pattern Name Modisco Significance metacluster_1/pattern_10 0.0114916	Absent
Mycn	Pattern Name Modisco Significance metacluster_1/pattern_10 0.0571226	Absent
Rfx7	Pattern Name Modisco Significance metacluster_1/pattern_12 0.000280348	Absent
Batf3	Pattern Name Modisco Significance metacluster_1/pattern_4 0.012117000000000001	Absent
Sp5	Pattern Name Modisco Significance metacluster_1/pattern_2 0.000766588	Absent
Rela	Pattern Name Modisco Significance metacluster_1/pattern_14 0.000165088	Absent
Atf2	Pattern Name Modisco Significance metacluster_1/pattern_6 0.000445514	Absent
Nfkb1	Pattern Name Modisco Significance metacluster_1/pattern_14 1.3625599999999999e-05	Absent
Mitf	Pattern Name Modisco Significance metacluster_1/pattern_10 0.00043872199999999995	Absent
Max	Pattern Name Modisco Significance metacluster_1/pattern_10 0.014719999999999999	Absent
Rfx3	Pattern Name Modisco Significance metacluster_1/pattern_12 0.0004958030000000001	Absent
Arnt	Pattern Name Modisco Significance metacluster_1/pattern_10 0.00126565	Absent
Batf	Pattern Name Modisco Significance metacluster_1/pattern_13 0.040288	Absent
Myc	Pattern Name Modisco Significance metacluster_1/pattern_10 0.0158451	Absent
Clock	Pattern Name Modisco Significance metacluster_1/pattern_10 0.00974177	Absent
Nfib	Pattern Name Modisco Significance metacluster_1/pattern_17 7.79931e-05	Absent
Jdp2	Pattern Name Modisco Significance metacluster_1/pattern_6 0.000169137 metacluster_1/pattern_13 0.00014111	Absent
Nfil3	Pattern Name Modisco Significance metacluster_1/pattern_6 0.00844357	Absent
Rarg	Pattern Name Modisco Significance metacluster_1/pattern_10 0.038069	Absent
Relb	Pattern Name Modisco Significance metacluster_1/pattern_14 5.42907e-05	Absent
Egr2	Pattern Name Modisco Significance metacluster_1/pattern_2 0.039722 metacluster_1/pattern_7 0.0391435	Absent
Fosb	Pattern Name Modisco Significance metacluster_1/pattern_13 9.016430000000001e-05	Absent
Arntl	Pattern Name Modisco Significance metacluster_1/pattern_10 0.010006000000000001	Absent
Rfx6	Pattern Name Modisco Significance metacluster_1/pattern_12 0.000970182	Absent
Xbp1	Pattern Name Modisco Significance metacluster_1/pattern_10 0.0359766	Absent
Maf	Pattern Name Modisco Significance metacluster_1/pattern_13 0.052266999999999994	Absent
Junb	Pattern Name Modisco Significance metacluster_1/pattern_13 0.019199400000000002	Absent
Atf1	Pattern Name Modisco Significance metacluster_1/pattern_6 0.0201939 metacluster_1/pattern_10 0.025506	Absent
Nfkb2	Pattern Name Modisco Significance metacluster_1/pattern_14 2.82916e-07	Absent
Stat4	Pattern Name Modisco Significance metacluster_1/pattern_1 0.058782799999999996	Absent
Hlf	Pattern Name Modisco Significance metacluster_1/pattern_6 0.0213917	Absent
Runx2	Pattern Name Modisco Significance metacluster_1/pattern_11 0.0105479	Absent
Egr3	Pattern Name Modisco Significance metacluster_1/pattern_2 0.035981	Absent
Bach2	Pattern Name Modisco Significance metacluster_1/pattern_13 0.00121773	Absent
Crem	Pattern Name Modisco Significance metacluster_1/pattern_6 0.00234527	Absent
Cebpg	Pattern Name Modisco Significance metacluster_1/pattern_6 0.05250740000000001	Absent
Zfp281	Pattern Name Modisco Significance metacluster_1/pattern_2 0.00465787	Absent
Jun	Pattern Name Modisco Significance metacluster_1/pattern_6 0.0320699 metacluster_1/pattern_13 0.0408024	Absent
Cbfb	Pattern Name Modisco Significance metacluster_1/pattern_11 0.00166074	Absent
Maff	Pattern Name Modisco Significance metacluster_1/pattern_13 0.0433221	Absent
Srebf1	Pattern Name Modisco Significance metacluster_1/pattern_10 0.027934800000000003	Absent
Mxi1	Pattern Name Modisco Significance metacluster_1/pattern_7 0.05078219999999999	Absent
Dbp	Pattern Name Modisco Significance metacluster_1/pattern_6 0.036052499999999994	Absent
Tfe3	Pattern Name Modisco Significance metacluster_1/pattern_6 0.0372634 metacluster_1/pattern_10 0.00047549800000000003	Absent
Atf7	Pattern Name Modisco Significance metacluster_1/pattern_6 0.000155558 metacluster_1/pattern_10 0.0510906	Absent
Creb1	Pattern Name Modisco Significance metacluster_1/pattern_6 0.000445514 metacluster_1/pattern_10 0.028449900000000004	Absent
Npas2	Pattern Name Modisco Significance metacluster_1/pattern_10 0.00270431	Absent
Tef	Pattern Name Modisco Significance metacluster_1/pattern_6 0.0125773	Absent
Runx1	Pattern Name Modisco Significance metacluster_1/pattern_11 5.6593100000000005e-05	Absent
Rorb	Pattern Name Modisco Significance metacluster_1/pattern_6 0.0529586	Absent
Pou5f1	Pattern Name Modisco Significance metacluster_1/pattern_12 0.037540699999999996	Absent
Bhlhe40	Pattern Name Modisco Significance metacluster_1/pattern_10 0.0220746	Absent
Nfic	Pattern Name Modisco Significance metacluster_1/pattern_17 0.00674112	Absent
Maz	Pattern Name Modisco Significance metacluster_1/pattern_2 0.00768992 metacluster_1/pattern_7 0.0357816	Absent
Runx3	Pattern Name Modisco Significance metacluster_1/pattern_11 0.00028462400000000003	Absent
Fosl2	Pattern Name Modisco Significance metacluster_1/pattern_6 0.00642708 metacluster_1/pattern_13 2.65839e-06	Absent
Tcfl5	Pattern Name Modisco Significance metacluster_1/pattern_10 0.0151144	Absent
Spi1	Pattern Name Modisco Significance metacluster_1/pattern_1 0.0512506	Absent
Mafb	Pattern Name Modisco Significance metacluster_1/pattern_6 0.00234527 metacluster_1/pattern_13 0.0294515	Absent
Atf3	Pattern Name Modisco Significance metacluster_1/pattern_6 0.00765799 metacluster_1/pattern_13 0.00014111	Absent

Unique Homer TFs: #3

TF Name	Modisco	Homer
Zbtb1	Absent	Pattern Name Homer Significance motif3.motif 0.049117400000000005
E2f7	Absent	Pattern Name Homer Significance motif3.motif 0.04047630000000001
Irf6	Absent	Pattern Name Homer Significance motif2.motif 0.0178467