# Parameters
data_name = "ES;v6.5;A;GEO"
modisco_root = "/srv/scratch/msharmin/mouse_hem/with_tfd/full_mouse50/Naive_modisco2019"
tomtom_report_root = "http://mitra.stanford.edu/kundaje/msharmin/report/tomtom_outs/cells"
task_dir = "task_102-naivegw"
perf_file = "/srv/scratch/msharmin/mouse_hem/with_tfd/full_mouse50/fineFactorized/task_102-naivegw/NaiveauPRC.txt"
homer_root = "/srv/scratch/msharmin/mouse_hem/with_tfd/full_mouse50/Naive_scans"
reportfile = "/mnt/lab_data/kundaje/msharmin/annotations/filtering samples_MS2.xlsx"
sheetname = "filter23"

from matlas.reports import display_metadata

load data from labcluster

Using TensorFlow backend.
2019-08-30 19:02:45,529 [WARNING] git-lfs not installed

display_metadata(data_name, perf_file, reportfile, sheetname)

Sample Information

MetaData Name	Description
Cell type	Embryonic Stem Cells(v6.5)
Cell Group	ES cells and embryonic tissues
Experiment Name	ATAC
Experiment Group	GEO

Pipeline Output

replicate	Naïve overlap peaks	IDR peaks	TSS enrichment (< 8 is very poor <10 is low)	Final number of unique mapping, dup-filtered, chrM filtered reads	Number of reads in called peak regions	Fraction of reads in called peak regions	Number of reads in promoter regions	Fraction of reads in promoter regions	Number of reads in enhancer regions	Fraction of reads in enhancer regions
rep1	229299	140341	8.9389	79632607	15820994	0.1987	8462226	0.1063	33651641	0.4227

Modelling Metadata

Metric	Value
auPRC	0.6322
Calibrated Recall at 50% FDR	0.216
Number of Positive Examples in Test Data	124149
Number of Negative Examples in Test Data	7946702
Imbalance Ratio in Test Data	0.0154
Test Chromosomes	chr2, chr3, chr19

from matlas.reports import display_paiwise_pattern_comparison
from matlas.reports import display_denovo_patterns

display_denovo_patterns(data_name, modisco_root=modisco_root)

TF-MoDISco is using the TensorFlow backend.

The following two links show list of Denovo Patterns and corresponding Motifs discovered by TF-MoDISco

Click here for Denovo Patterns by TF-MoDISco: #26

Pattern Name	TF Name(s)	Modisco
metacluster_1/pattern_0 # seqlets: 3545 SequenceContrib ScoresHyp_Contrib Scores	Ctcf, Ctcfl
metacluster_1/pattern_1 # seqlets: 2989 SequenceContrib ScoresHyp_Contrib Scores	Sp4, Sp2, Klf3, Sp3, Sp1, Klf7, Klf4, Klf6, Klf8, Klf1, Klf12, E2f4, Egr1, Egr2, Klf5, Zbtb17, E2f1, Zfp281, Sp5, Zfp740, Sall4, Zbtb1, Egr3, Zfx
metacluster_1/pattern_2 # seqlets: 2093 SequenceContrib ScoresHyp_Contrib Scores	Maz, Wt1, Klf15, Bcl6, Rela, Srebf2
metacluster_1/pattern_3 # seqlets: 2045 SequenceContrib ScoresHyp_Contrib Scores	Pou5f1, Nanog, Sox2, Pou2f2, Lef1, Pou2f1
metacluster_1/pattern_4 # seqlets: 1680 SequenceContrib ScoresHyp_Contrib Scores
metacluster_1/pattern_5 # seqlets: 1273 SequenceContrib ScoresHyp_Contrib Scores	Fosl2, Atf3, Fosb, Jun, Batf, Junb, Fosl1, Jund, Fos, Jdp2, Bach2, Nfe2l2, Nfe2, Bach1, Mafk, Mafa, Mafb, Mafg, Maff, Maf, Nfatc1
metacluster_1/pattern_6 # seqlets: 1001 SequenceContrib ScoresHyp_Contrib Scores	Nfyb, Nfyc, Nfya, Foxi1, Pbx3
metacluster_1/pattern_7 # seqlets: 747 SequenceContrib ScoresHyp_Contrib Scores	Atf7, Creb1, Atf2, Creb5, Atf1, Crem, Usf1, Tfe3, Srebf1, Creb3l2, Usf2, Tfec, Nfil3, Hlf, Dbp, Tef, Tfeb, Mitf, Mlx, Bhlhe40, Rxrb, Xbp1, Cebpb, Arntl, Atf4, Cebpa
metacluster_1/pattern_8 # seqlets: 739 SequenceContrib ScoresHyp_Contrib Scores	Tead4, Tead2, Tead1
metacluster_1/pattern_9 # seqlets: 695 SequenceContrib ScoresHyp_Contrib Scores	Rfx2, Rfx6, Rfx3, Rfx1, Rfx4, Rfx7
metacluster_1/pattern_10 # seqlets: 648 SequenceContrib ScoresHyp_Contrib Scores	Zic2, Zic3, Zic1
metacluster_1/pattern_11 # seqlets: 617 SequenceContrib ScoresHyp_Contrib Scores	Gabpa, Elk1, Fli1, Elk4, Ets1, Erg, Elk3, Etv5, Fev, Elf1, Etv4, Etv1, Etv6, Etv3, XP_911724.4, Elf2, Etv2, Ehf, Elf5, Spi1, Elf4, Spdef, Elf3, Spic
metacluster_1/pattern_12 # seqlets: 570 SequenceContrib ScoresHyp_Contrib Scores	Nrf1
metacluster_1/pattern_13 # seqlets: 518 SequenceContrib ScoresHyp_Contrib Scores	Sox4, Sox17, Sox3, Sox6, Sox5, Sox14, Sox8, Sox7, Sox12, Sox18, Sry, Sox9, Sox11, Sox13, Sox21
metacluster_1/pattern_14 # seqlets: 282 SequenceContrib ScoresHyp_Contrib Scores	Six2, Six4, Six1
metacluster_1/pattern_15 # seqlets: 264 SequenceContrib ScoresHyp_Contrib Scores	Zfp143, Thap11, Tbx2
metacluster_1/pattern_16 # seqlets: 236 SequenceContrib ScoresHyp_Contrib Scores	Vsx2, Lhx2, Lhx9, Mnx1, Nobox, Prrx2, Hand1, Esx1, Pou1f1, Lbx2, Pax6, Gbx2, Lhx3, Arx, Rhox6, Msx3, Gbx1, Alx1, Shox2, Msx2, Prrx1, Alx4, En1, Uncx, Emx2, Alx3, Nkx1-1, Otp, Lhx1, Lhx4, En2, Hoxd3, Prop1, Lhx5, Barhl2, Hoxa3, Sebox
metacluster_1/pattern_17 # seqlets: 172 SequenceContrib ScoresHyp_Contrib Scores
metacluster_1/pattern_18 # seqlets: 171 SequenceContrib ScoresHyp_Contrib Scores	Taf1, Yy1, Zfp42, Mxi1
metacluster_1/pattern_19 # seqlets: 160 SequenceContrib ScoresHyp_Contrib Scores	Rest
metacluster_1/pattern_20 # seqlets: 76 SequenceContrib ScoresHyp_Contrib Scores	Grhl2
metacluster_1/pattern_21 # seqlets: 77 SequenceContrib ScoresHyp_Contrib Scores
metacluster_1/pattern_22 # seqlets: 58 SequenceContrib ScoresHyp_Contrib Scores
metacluster_1/pattern_23 # seqlets: 54 SequenceContrib ScoresHyp_Contrib Scores
metacluster_1/pattern_24 # seqlets: 53 SequenceContrib ScoresHyp_Contrib Scores
metacluster_1/pattern_25 # seqlets: 51 SequenceContrib ScoresHyp_Contrib Scores

Click here for Motifs by TF-MoDISco: #191

TF Name	Pattern(s)
Ctcf	Pattern Name Modisco Significance metacluster_1/pattern_0 3.62873e-15 metacluster_1/pattern_17 0.014058700000000002 metacluster_1/pattern_24 8.48009e-07
Ctcfl	Pattern Name Modisco Significance metacluster_1/pattern_0 1.01099e-09 metacluster_1/pattern_12 0.055470900000000004 metacluster_1/pattern_24 1.23751e-05
Sp4	Pattern Name Modisco Significance metacluster_1/pattern_1 0.00144701 metacluster_1/pattern_2 0.044307599999999996
Sp2	Pattern Name Modisco Significance metacluster_1/pattern_1 2.8958e-06 metacluster_1/pattern_2 0.0033338 metacluster_1/pattern_12 0.004142100000000001 metacluster_1/pattern_18 2.97381e-05
Klf3	Pattern Name Modisco Significance metacluster_1/pattern_1 2.8958e-06 metacluster_1/pattern_2 0.00408985 metacluster_1/pattern_18 0.027369499999999998
Sp3	Pattern Name Modisco Significance metacluster_1/pattern_1 9.28513e-06 metacluster_1/pattern_2 0.000964998 metacluster_1/pattern_12 0.004142100000000001 metacluster_1/pattern_18 0.000754318
Sp1	Pattern Name Modisco Significance metacluster_1/pattern_1 0.00016916700000000002 metacluster_1/pattern_2 0.044307599999999996 metacluster_1/pattern_12 0.0518885 metacluster_1/pattern_18 0.000452931
Klf7	Pattern Name Modisco Significance metacluster_1/pattern_1 0.000129335 metacluster_1/pattern_2 0.04020719999999999
Klf4	Pattern Name Modisco Significance metacluster_1/pattern_1 0.00291023 metacluster_1/pattern_2 0.0356496
Klf6	Pattern Name Modisco Significance metacluster_1/pattern_1 0.000198835 metacluster_1/pattern_2 0.013206899999999999
Klf8	Pattern Name Modisco Significance metacluster_1/pattern_1 0.000198835 metacluster_1/pattern_2 0.0331323
Klf1	Pattern Name Modisco Significance metacluster_1/pattern_1 0.0114477
Klf12	Pattern Name Modisco Significance metacluster_1/pattern_1 0.00378422 metacluster_1/pattern_2 0.0598624
E2f4	Pattern Name Modisco Significance metacluster_1/pattern_1 0.000233475 metacluster_1/pattern_2 0.043776999999999996
Egr1	Pattern Name Modisco Significance metacluster_1/pattern_1 0.028061400000000004 metacluster_1/pattern_2 0.0535869 metacluster_1/pattern_18 0.0491961
Egr2	Pattern Name Modisco Significance metacluster_1/pattern_1 0.028893799999999997 metacluster_1/pattern_2 0.00302987 metacluster_1/pattern_18 0.042253
Klf5	Pattern Name Modisco Significance metacluster_1/pattern_1 0.00671317 metacluster_1/pattern_2 0.00418846
Zbtb17	Pattern Name Modisco Significance metacluster_1/pattern_1 0.0074631 metacluster_1/pattern_2 1.33612e-06 metacluster_1/pattern_18 0.010282
E2f1	Pattern Name Modisco Significance metacluster_1/pattern_1 0.00950325 metacluster_1/pattern_2 0.046335900000000006
Zfp281	Pattern Name Modisco Significance metacluster_1/pattern_1 0.0249248 metacluster_1/pattern_2 0.00472625
Sp5	Pattern Name Modisco Significance metacluster_1/pattern_1 0.027642400000000004 metacluster_1/pattern_2 0.000136878
Zfp740	Pattern Name Modisco Significance metacluster_1/pattern_1 0.028893799999999997 metacluster_1/pattern_2 0.021031599999999998
Sall4	Pattern Name Modisco Significance metacluster_1/pattern_1 0.0404508 metacluster_1/pattern_2 0.0356496
Zbtb1	Pattern Name Modisco Significance metacluster_1/pattern_1 0.041526
Egr3	Pattern Name Modisco Significance metacluster_1/pattern_1 0.05317569999999999
Zfx	Pattern Name Modisco Significance metacluster_1/pattern_1 0.055565199999999995 metacluster_1/pattern_12 0.004142100000000001 metacluster_1/pattern_18 0.00596039
Maz	Pattern Name Modisco Significance metacluster_1/pattern_2 0.00109364 metacluster_1/pattern_18 0.0382971
Wt1	Pattern Name Modisco Significance metacluster_1/pattern_2 0.00188175 metacluster_1/pattern_18 0.0375259
Klf15	Pattern Name Modisco Significance metacluster_1/pattern_2 0.00507483
Bcl6	Pattern Name Modisco Significance metacluster_1/pattern_2 0.043776999999999996
Rela	Pattern Name Modisco Significance metacluster_1/pattern_2 0.0535869
Srebf2	Pattern Name Modisco Significance metacluster_1/pattern_2 0.0548111 metacluster_1/pattern_7 0.05395369999999999
Pou5f1	Pattern Name Modisco Significance metacluster_1/pattern_3 2.9137299999999997e-06 metacluster_1/pattern_16 0.0358473
Nanog	Pattern Name Modisco Significance metacluster_1/pattern_3 4.44553e-09 metacluster_1/pattern_16 0.0307546
Sox2	Pattern Name Modisco Significance metacluster_1/pattern_3 3.7221499999999996e-06 metacluster_1/pattern_13 0.0247111 metacluster_1/pattern_16 0.032394900000000004
Pou2f2	Pattern Name Modisco Significance metacluster_1/pattern_3 0.0404559
Lef1	Pattern Name Modisco Significance metacluster_1/pattern_3 0.0226752 metacluster_1/pattern_16 0.032394900000000004
Pou2f1	Pattern Name Modisco Significance metacluster_1/pattern_3 0.057188800000000005
Fosl2	Pattern Name Modisco Significance metacluster_1/pattern_5 3.1685599999999998e-06 metacluster_1/pattern_7 0.00481486
Atf3	Pattern Name Modisco Significance metacluster_1/pattern_5 9.13634e-07 metacluster_1/pattern_7 0.00481486
Fosb	Pattern Name Modisco Significance metacluster_1/pattern_5 3.1685599999999998e-06
Jun	Pattern Name Modisco Significance metacluster_1/pattern_5 3.1685599999999998e-06 metacluster_1/pattern_7 0.0192446
Batf	Pattern Name Modisco Significance metacluster_1/pattern_5 0.00195895
Junb	Pattern Name Modisco Significance metacluster_1/pattern_5 0.056305499999999994
Fosl1	Pattern Name Modisco Significance metacluster_1/pattern_5 5.00743e-06 metacluster_1/pattern_7 0.0118599
Jund	Pattern Name Modisco Significance metacluster_1/pattern_5 0.014021
Fos	Pattern Name Modisco Significance metacluster_1/pattern_5 1.14018e-05
Jdp2	Pattern Name Modisco Significance metacluster_1/pattern_5 7.63642e-05 metacluster_1/pattern_7 0.00034038
Bach2	Pattern Name Modisco Significance metacluster_1/pattern_5 0.000236255
Nfe2l2	Pattern Name Modisco Significance metacluster_1/pattern_5 0.0013109999999999999
Nfe2	Pattern Name Modisco Significance metacluster_1/pattern_5 0.00117292
Bach1	Pattern Name Modisco Significance metacluster_1/pattern_5 0.00154392
Mafk	Pattern Name Modisco Significance metacluster_1/pattern_5 0.00264605
Mafa	Pattern Name Modisco Significance metacluster_1/pattern_5 0.00606043
Mafb	Pattern Name Modisco Significance metacluster_1/pattern_5 0.008272700000000001 metacluster_1/pattern_7 0.00501104
Mafg	Pattern Name Modisco Significance metacluster_1/pattern_5 0.00613149
Maff	Pattern Name Modisco Significance metacluster_1/pattern_5 0.00788488
Maf	Pattern Name Modisco Significance metacluster_1/pattern_5 0.016083
Nfatc1	Pattern Name Modisco Significance metacluster_1/pattern_5 0.027247399999999998
Nfyb	Pattern Name Modisco Significance metacluster_1/pattern_6 3.04543e-11
Nfyc	Pattern Name Modisco Significance metacluster_1/pattern_6 1.4134e-08
Nfya	Pattern Name Modisco Significance metacluster_1/pattern_6 2.08932e-07
Foxi1	Pattern Name Modisco Significance metacluster_1/pattern_6 3.3209699999999996e-06
Pbx3	Pattern Name Modisco Significance metacluster_1/pattern_6 1.05976e-05
Atf7	Pattern Name Modisco Significance metacluster_1/pattern_7 0.0001511
Creb1	Pattern Name Modisco Significance metacluster_1/pattern_7 0.000753269
Atf2	Pattern Name Modisco Significance metacluster_1/pattern_7 0.000486647
Creb5	Pattern Name Modisco Significance metacluster_1/pattern_7 9.366e-05
Atf1	Pattern Name Modisco Significance metacluster_1/pattern_7 0.00905973
Crem	Pattern Name Modisco Significance metacluster_1/pattern_7 0.0037485999999999995
Usf1	Pattern Name Modisco Significance metacluster_1/pattern_7 0.00375424
Tfe3	Pattern Name Modisco Significance metacluster_1/pattern_7 0.052000199999999996
Srebf1	Pattern Name Modisco Significance metacluster_1/pattern_7 0.0275438
Creb3l2	Pattern Name Modisco Significance metacluster_1/pattern_7 0.00657661
Usf2	Pattern Name Modisco Significance metacluster_1/pattern_7 0.05395369999999999
Tfec	Pattern Name Modisco Significance metacluster_1/pattern_7 0.0361418
Nfil3	Pattern Name Modisco Significance metacluster_1/pattern_7 0.0375676
Hlf	Pattern Name Modisco Significance metacluster_1/pattern_7 0.0117402
Dbp	Pattern Name Modisco Significance metacluster_1/pattern_7 0.0403656
Tef	Pattern Name Modisco Significance metacluster_1/pattern_7 0.0131011
Tfeb	Pattern Name Modisco Significance metacluster_1/pattern_7 0.0501946
Mitf	Pattern Name Modisco Significance metacluster_1/pattern_7 0.0272406
Mlx	Pattern Name Modisco Significance metacluster_1/pattern_7 0.050673800000000005
Bhlhe40	Pattern Name Modisco Significance metacluster_1/pattern_7 0.028166200000000002
Rxrb	Pattern Name Modisco Significance metacluster_1/pattern_7 0.0361418
Xbp1	Pattern Name Modisco Significance metacluster_1/pattern_7 0.050673800000000005
Cebpb	Pattern Name Modisco Significance metacluster_1/pattern_7 0.05395369999999999
Arntl	Pattern Name Modisco Significance metacluster_1/pattern_7 0.0475284
Atf4	Pattern Name Modisco Significance metacluster_1/pattern_7 0.05395369999999999
Cebpa	Pattern Name Modisco Significance metacluster_1/pattern_7 0.0565636
Tead4	Pattern Name Modisco Significance metacluster_1/pattern_8 0.00135408
Tead2	Pattern Name Modisco Significance metacluster_1/pattern_8 0.00412703
Tead1	Pattern Name Modisco Significance metacluster_1/pattern_8 0.00871739
Rfx2	Pattern Name Modisco Significance metacluster_1/pattern_9 0.019123400000000002
Rfx6	Pattern Name Modisco Significance metacluster_1/pattern_9 3.825e-06
Rfx3	Pattern Name Modisco Significance metacluster_1/pattern_9 0.00514027
Rfx1	Pattern Name Modisco Significance metacluster_1/pattern_9 4.42606e-05 metacluster_1/pattern_18 0.010282
Rfx4	Pattern Name Modisco Significance metacluster_1/pattern_9 5.1026e-05
Rfx7	Pattern Name Modisco Significance metacluster_1/pattern_9 0.00289365
Zic2	Pattern Name Modisco Significance metacluster_1/pattern_10 4.80799e-13 metacluster_1/pattern_24 0.039732199999999995
Zic3	Pattern Name Modisco Significance metacluster_1/pattern_10 0.0277431 metacluster_1/pattern_24 0.047617
Zic1	Pattern Name Modisco Significance metacluster_1/pattern_10 0.036339800000000005
Gabpa	Pattern Name Modisco Significance metacluster_1/pattern_11 0.00107122
Elk1	Pattern Name Modisco Significance metacluster_1/pattern_11 0.000896801
Fli1	Pattern Name Modisco Significance metacluster_1/pattern_11 0.00192242
Elk4	Pattern Name Modisco Significance metacluster_1/pattern_11 0.00123011
Ets1	Pattern Name Modisco Significance metacluster_1/pattern_11 0.00192242
Erg	Pattern Name Modisco Significance metacluster_1/pattern_11 0.00192242
Elk3	Pattern Name Modisco Significance metacluster_1/pattern_11 0.000892817
Etv5	Pattern Name Modisco Significance metacluster_1/pattern_11 0.000522242
Fev	Pattern Name Modisco Significance metacluster_1/pattern_11 0.0006539240000000001
Elf1	Pattern Name Modisco Significance metacluster_1/pattern_11 0.00107122
Etv4	Pattern Name Modisco Significance metacluster_1/pattern_11 0.00548868
Etv1	Pattern Name Modisco Significance metacluster_1/pattern_11 0.00126233
Etv6	Pattern Name Modisco Significance metacluster_1/pattern_11 0.0129506
Etv3	Pattern Name Modisco Significance metacluster_1/pattern_11 0.00283493
XP_911724.4	Pattern Name Modisco Significance metacluster_1/pattern_11 0.00292161
Elf2	Pattern Name Modisco Significance metacluster_1/pattern_11 0.0180055
Etv2	Pattern Name Modisco Significance metacluster_1/pattern_11 0.00461116
Ehf	Pattern Name Modisco Significance metacluster_1/pattern_11 0.0329451
Elf5	Pattern Name Modisco Significance metacluster_1/pattern_11 0.00804599
Spi1	Pattern Name Modisco Significance metacluster_1/pattern_11 0.0557498
Elf4	Pattern Name Modisco Significance metacluster_1/pattern_11 0.012556600000000001
Spdef	Pattern Name Modisco Significance metacluster_1/pattern_11 0.0294209
Elf3	Pattern Name Modisco Significance metacluster_1/pattern_11 0.0368724
Spic	Pattern Name Modisco Significance metacluster_1/pattern_11 0.0557498
Nrf1	Pattern Name Modisco Significance metacluster_1/pattern_12 2.2857500000000002e-07
Sox4	Pattern Name Modisco Significance metacluster_1/pattern_13 0.0344262
Sox17	Pattern Name Modisco Significance metacluster_1/pattern_13 0.008460700000000002
Sox3	Pattern Name Modisco Significance metacluster_1/pattern_13 0.015419899999999999
Sox6	Pattern Name Modisco Significance metacluster_1/pattern_13 0.008460700000000002
Sox5	Pattern Name Modisco Significance metacluster_1/pattern_13 0.008460700000000002
Sox14	Pattern Name Modisco Significance metacluster_1/pattern_13 0.00893707
Sox8	Pattern Name Modisco Significance metacluster_1/pattern_13 0.015419899999999999
Sox7	Pattern Name Modisco Significance metacluster_1/pattern_13 0.015419899999999999
Sox12	Pattern Name Modisco Significance metacluster_1/pattern_13 0.0163699
Sox18	Pattern Name Modisco Significance metacluster_1/pattern_13 0.024019
Sry	Pattern Name Modisco Significance metacluster_1/pattern_13 0.0247111
Sox9	Pattern Name Modisco Significance metacluster_1/pattern_13 0.027057799999999996
Sox11	Pattern Name Modisco Significance metacluster_1/pattern_13 0.0299642
Sox13	Pattern Name Modisco Significance metacluster_1/pattern_13 0.0471294
Sox21	Pattern Name Modisco Significance metacluster_1/pattern_13 0.0520362
Six2	Pattern Name Modisco Significance metacluster_1/pattern_14 1.59502e-06
Six4	Pattern Name Modisco Significance metacluster_1/pattern_14 1.59502e-06
Six1	Pattern Name Modisco Significance metacluster_1/pattern_14 3.03661e-05
Zfp143	Pattern Name Modisco Significance metacluster_1/pattern_15 1.50917e-22
Thap11	Pattern Name Modisco Significance metacluster_1/pattern_15 4.40862e-21
Tbx2	Pattern Name Modisco Significance metacluster_1/pattern_15 1.4929399999999999e-12
Vsx2	Pattern Name Modisco Significance metacluster_1/pattern_16 0.0307546
Lhx2	Pattern Name Modisco Significance metacluster_1/pattern_16 0.0341137
Lhx9	Pattern Name Modisco Significance metacluster_1/pattern_16 0.0349385
Mnx1	Pattern Name Modisco Significance metacluster_1/pattern_16 0.0358473
Nobox	Pattern Name Modisco Significance metacluster_1/pattern_16 0.057272699999999996
Prrx2	Pattern Name Modisco Significance metacluster_1/pattern_16 0.0399621
Hand1	Pattern Name Modisco Significance metacluster_1/pattern_16 0.0358473
Esx1	Pattern Name Modisco Significance metacluster_1/pattern_16 0.0399505
Pou1f1	Pattern Name Modisco Significance metacluster_1/pattern_16 0.0399505
Lbx2	Pattern Name Modisco Significance metacluster_1/pattern_16 0.0399505
Pax6	Pattern Name Modisco Significance metacluster_1/pattern_16 0.0399505
Gbx2	Pattern Name Modisco Significance metacluster_1/pattern_16 0.0399505
Lhx3	Pattern Name Modisco Significance metacluster_1/pattern_16 0.0584442
Arx	Pattern Name Modisco Significance metacluster_1/pattern_16 0.0399505
Rhox6	Pattern Name Modisco Significance metacluster_1/pattern_16 0.0399621
Msx3	Pattern Name Modisco Significance metacluster_1/pattern_16 0.0399621
Gbx1	Pattern Name Modisco Significance metacluster_1/pattern_16 0.0399621
Alx1	Pattern Name Modisco Significance metacluster_1/pattern_16 0.0418372
Shox2	Pattern Name Modisco Significance metacluster_1/pattern_16 0.0399621
Msx2	Pattern Name Modisco Significance metacluster_1/pattern_16 0.0399621
Prrx1	Pattern Name Modisco Significance metacluster_1/pattern_16 0.0399621
Alx4	Pattern Name Modisco Significance metacluster_1/pattern_16 0.0418372
En1	Pattern Name Modisco Significance metacluster_1/pattern_16 0.057272699999999996
Uncx	Pattern Name Modisco Significance metacluster_1/pattern_16 0.057272699999999996
Emx2	Pattern Name Modisco Significance metacluster_1/pattern_16 0.057272699999999996
Alx3	Pattern Name Modisco Significance metacluster_1/pattern_16 0.057272699999999996
Nkx1-1	Pattern Name Modisco Significance metacluster_1/pattern_16 0.057272699999999996
Otp	Pattern Name Modisco Significance metacluster_1/pattern_16 0.0584442
Lhx1	Pattern Name Modisco Significance metacluster_1/pattern_16 0.0584442
Lhx4	Pattern Name Modisco Significance metacluster_1/pattern_16 0.0584442
En2	Pattern Name Modisco Significance metacluster_1/pattern_16 0.0584442
Hoxd3	Pattern Name Modisco Significance metacluster_1/pattern_16 0.0584442
Prop1	Pattern Name Modisco Significance metacluster_1/pattern_16 0.0584442
Lhx5	Pattern Name Modisco Significance metacluster_1/pattern_16 0.0584442
Barhl2	Pattern Name Modisco Significance metacluster_1/pattern_16 0.0584442
Hoxa3	Pattern Name Modisco Significance metacluster_1/pattern_16 0.0584442
Sebox	Pattern Name Modisco Significance metacluster_1/pattern_16 0.0584442
Taf1	Pattern Name Modisco Significance metacluster_1/pattern_18 7.19745e-06
Yy1	Pattern Name Modisco Significance metacluster_1/pattern_18 2.8238699999999998e-05
Zfp42	Pattern Name Modisco Significance metacluster_1/pattern_18 0.0184146
Mxi1	Pattern Name Modisco Significance metacluster_1/pattern_18 0.0382971
Rest	Pattern Name Modisco Significance metacluster_1/pattern_19 5.32378e-17
Grhl2	Pattern Name Modisco Significance metacluster_1/pattern_20 0.019375

display_paiwise_pattern_comparison(data_name, modisco_root, homer_root)

Number of CISBP TFs obtained by TF-MoDISco and Homer

Shared TFs between TF-MoDISco and Homer: #92

TF Name	Modisco	Homer
Fli1	Pattern Name Modisco Significance metacluster_1/pattern_11 0.00192242	Pattern Name Homer Significance motif12.motif 0.0458161
E2f1	Pattern Name Modisco Significance metacluster_1/pattern_1 0.00950325 metacluster_1/pattern_2 0.046335900000000006	Pattern Name Homer Significance motif2.motif 0.00318084
Nrf1	Pattern Name Modisco Significance metacluster_1/pattern_12 2.2857500000000002e-07	Pattern Name Homer Significance motif21.motif 4.7146e-06
Atf3	Pattern Name Modisco Significance metacluster_1/pattern_5 9.13634e-07 metacluster_1/pattern_7 0.00481486	Pattern Name Homer Significance motif3.motif 2.50623e-05 motif19.motif 0.0316218
Rfx3	Pattern Name Modisco Significance metacluster_1/pattern_9 0.00514027	Pattern Name Homer Significance motif20.motif 0.0161929
Klf8	Pattern Name Modisco Significance metacluster_1/pattern_1 0.000198835 metacluster_1/pattern_2 0.0331323	Pattern Name Homer Significance motif2.motif 0.000135794
Foxi1	Pattern Name Modisco Significance metacluster_1/pattern_6 3.3209699999999996e-06	Pattern Name Homer Significance motif5.motif 1.07043e-06
Batf	Pattern Name Modisco Significance metacluster_1/pattern_5 0.00195895	Pattern Name Homer Significance motif3.motif 0.043443199999999994
Pou2f2	Pattern Name Modisco Significance metacluster_1/pattern_3 0.0404559	Pattern Name Homer Significance motif4.motif 0.0213144
Usf2	Pattern Name Modisco Significance metacluster_1/pattern_7 0.05395369999999999	Pattern Name Homer Significance motif19.motif 0.023122099999999996
Jun	Pattern Name Modisco Significance metacluster_1/pattern_5 3.1685599999999998e-06 metacluster_1/pattern_7 0.0192446	Pattern Name Homer Significance motif3.motif 8.35399e-06
Rfx1	Pattern Name Modisco Significance metacluster_1/pattern_9 4.42606e-05 metacluster_1/pattern_18 0.010282	Pattern Name Homer Significance motif20.motif 0.00401581
Jdp2	Pattern Name Modisco Significance metacluster_1/pattern_5 7.63642e-05 metacluster_1/pattern_7 0.00034038	Pattern Name Homer Significance motif3.motif 0.00340446 motif19.motif 0.0101282
Pou5f1	Pattern Name Modisco Significance metacluster_1/pattern_3 2.9137299999999997e-06 metacluster_1/pattern_16 0.0358473	Pattern Name Homer Significance motif4.motif 7.74143e-06 motif10.motif 0.0352176
Nfyb	Pattern Name Modisco Significance metacluster_1/pattern_6 3.04543e-11	Pattern Name Homer Significance motif5.motif 1.0048e-09
Etv4	Pattern Name Modisco Significance metacluster_1/pattern_11 0.00548868	Pattern Name Homer Significance motif12.motif 0.0458161
Fosb	Pattern Name Modisco Significance metacluster_1/pattern_5 3.1685599999999998e-06	Pattern Name Homer Significance motif3.motif 0.00011077899999999999
Atf1	Pattern Name Modisco Significance metacluster_1/pattern_7 0.00905973	Pattern Name Homer Significance motif19.motif 0.0016481999999999998
Ets1	Pattern Name Modisco Significance metacluster_1/pattern_11 0.00192242	Pattern Name Homer Significance motif12.motif 0.055747500000000005
Fev	Pattern Name Modisco Significance metacluster_1/pattern_11 0.0006539240000000001	Pattern Name Homer Significance motif12.motif 0.0458161
Nfe2	Pattern Name Modisco Significance metacluster_1/pattern_5 0.00117292	Pattern Name Homer Significance motif3.motif 0.0197012
Etv5	Pattern Name Modisco Significance metacluster_1/pattern_11 0.000522242	Pattern Name Homer Significance motif12.motif 0.0244914
Sox5	Pattern Name Modisco Significance metacluster_1/pattern_13 0.008460700000000002	Pattern Name Homer Significance motif10.motif 0.059730099999999994
Klf4	Pattern Name Modisco Significance metacluster_1/pattern_1 0.00291023 metacluster_1/pattern_2 0.0356496	Pattern Name Homer Significance motif2.motif 0.00936939
Klf12	Pattern Name Modisco Significance metacluster_1/pattern_1 0.00378422 metacluster_1/pattern_2 0.0598624	Pattern Name Homer Significance motif2.motif 0.0101713
Fos	Pattern Name Modisco Significance metacluster_1/pattern_5 1.14018e-05	Pattern Name Homer Significance motif3.motif 0.00014812200000000002
Zbtb17	Pattern Name Modisco Significance metacluster_1/pattern_1 0.0074631 metacluster_1/pattern_2 1.33612e-06 metacluster_1/pattern_18 0.010282	Pattern Name Homer Significance motif2.motif 0.00433185
E2f4	Pattern Name Modisco Significance metacluster_1/pattern_1 0.000233475 metacluster_1/pattern_2 0.043776999999999996	Pattern Name Homer Significance motif2.motif 0.00046313800000000004
Klf5	Pattern Name Modisco Significance metacluster_1/pattern_1 0.00671317 metacluster_1/pattern_2 0.00418846	Pattern Name Homer Significance motif2.motif 0.0021125999999999996
Elk3	Pattern Name Modisco Significance metacluster_1/pattern_11 0.000892817	Pattern Name Homer Significance motif12.motif 0.0458161
Rfx4	Pattern Name Modisco Significance metacluster_1/pattern_9 5.1026e-05	Pattern Name Homer Significance motif20.motif 0.00124646
Nfe2l2	Pattern Name Modisco Significance metacluster_1/pattern_5 0.0013109999999999999	Pattern Name Homer Significance motif3.motif 0.0318505
Gabpa	Pattern Name Modisco Significance metacluster_1/pattern_11 0.00107122	Pattern Name Homer Significance motif12.motif 0.0458161
Mafg	Pattern Name Modisco Significance metacluster_1/pattern_5 0.00613149	Pattern Name Homer Significance motif3.motif 0.0198133
Mafa	Pattern Name Modisco Significance metacluster_1/pattern_5 0.00606043	Pattern Name Homer Significance motif3.motif 0.00292103
Elk4	Pattern Name Modisco Significance metacluster_1/pattern_11 0.00123011	Pattern Name Homer Significance motif12.motif 0.05662999999999999
Jund	Pattern Name Modisco Significance metacluster_1/pattern_5 0.014021	Pattern Name Homer Significance motif3.motif 0.0247801
Elf4	Pattern Name Modisco Significance metacluster_1/pattern_11 0.012556600000000001	Pattern Name Homer Significance motif12.motif 0.05363919999999999
Sox2	Pattern Name Modisco Significance metacluster_1/pattern_3 3.7221499999999996e-06 metacluster_1/pattern_13 0.0247111 metacluster_1/pattern_16 0.032394900000000004	Pattern Name Homer Significance motif4.motif 3.73906e-06 motif10.motif 0.0352176
Sp3	Pattern Name Modisco Significance metacluster_1/pattern_1 9.28513e-06 metacluster_1/pattern_2 0.000964998 metacluster_1/pattern_12 0.004142100000000001 metacluster_1/pattern_18 0.000754318	Pattern Name Homer Significance motif2.motif 0.00018564700000000002
Etv1	Pattern Name Modisco Significance metacluster_1/pattern_11 0.00126233	Pattern Name Homer Significance motif12.motif 0.048117599999999996
Creb1	Pattern Name Modisco Significance metacluster_1/pattern_7 0.000753269	Pattern Name Homer Significance motif19.motif 0.01505
Egr1	Pattern Name Modisco Significance metacluster_1/pattern_1 0.028061400000000004 metacluster_1/pattern_2 0.0535869 metacluster_1/pattern_18 0.0491961	Pattern Name Homer Significance motif2.motif 0.05172619999999999
Sp2	Pattern Name Modisco Significance metacluster_1/pattern_1 2.8958e-06 metacluster_1/pattern_2 0.0033338 metacluster_1/pattern_12 0.004142100000000001 metacluster_1/pattern_18 2.97381e-05	Pattern Name Homer Significance motif2.motif 0.000117041
Klf3	Pattern Name Modisco Significance metacluster_1/pattern_1 2.8958e-06 metacluster_1/pattern_2 0.00408985 metacluster_1/pattern_18 0.027369499999999998	Pattern Name Homer Significance motif2.motif 5.19949e-05
Klf7	Pattern Name Modisco Significance metacluster_1/pattern_1 0.000129335 metacluster_1/pattern_2 0.04020719999999999	Pattern Name Homer Significance motif2.motif 0.000135794
Egr2	Pattern Name Modisco Significance metacluster_1/pattern_1 0.028893799999999997 metacluster_1/pattern_2 0.00302987 metacluster_1/pattern_18 0.042253	Pattern Name Homer Significance motif2.motif 0.043012699999999994
Zfp281	Pattern Name Modisco Significance metacluster_1/pattern_1 0.0249248 metacluster_1/pattern_2 0.00472625	Pattern Name Homer Significance motif2.motif 0.0417259
Atf7	Pattern Name Modisco Significance metacluster_1/pattern_7 0.0001511	Pattern Name Homer Significance motif19.motif 0.00812669
Ehf	Pattern Name Modisco Significance metacluster_1/pattern_11 0.0329451	Pattern Name Homer Significance motif12.motif 0.0458161
Elf2	Pattern Name Modisco Significance metacluster_1/pattern_11 0.0180055	Pattern Name Homer Significance motif12.motif 0.048117599999999996
Elf5	Pattern Name Modisco Significance metacluster_1/pattern_11 0.00804599	Pattern Name Homer Significance motif12.motif 0.048117599999999996
Rfx6	Pattern Name Modisco Significance metacluster_1/pattern_9 3.825e-06	Pattern Name Homer Significance motif20.motif 0.006794199999999999
Sp4	Pattern Name Modisco Significance metacluster_1/pattern_1 0.00144701 metacluster_1/pattern_2 0.044307599999999996	Pattern Name Homer Significance motif2.motif 0.0101713
Zfp143	Pattern Name Modisco Significance metacluster_1/pattern_15 1.50917e-22	Pattern Name Homer Significance motif6.motif 1.27752e-08
Junb	Pattern Name Modisco Significance metacluster_1/pattern_5 0.056305499999999994	Pattern Name Homer Significance motif3.motif 0.00014812200000000002
Rfx2	Pattern Name Modisco Significance metacluster_1/pattern_9 0.019123400000000002	Pattern Name Homer Significance motif20.motif 0.0161929
Pou1f1	Pattern Name Modisco Significance metacluster_1/pattern_16 0.0399505	Pattern Name Homer Significance motif26.motif 0.010873200000000001
Bach2	Pattern Name Modisco Significance metacluster_1/pattern_5 0.000236255	Pattern Name Homer Significance motif3.motif 0.00247391
Rxrb	Pattern Name Modisco Significance metacluster_1/pattern_7 0.0361418	Pattern Name Homer Significance motif19.motif 0.029174900000000004
Fosl2	Pattern Name Modisco Significance metacluster_1/pattern_5 3.1685599999999998e-06 metacluster_1/pattern_7 0.00481486	Pattern Name Homer Significance motif3.motif 0.000189289
Nfya	Pattern Name Modisco Significance metacluster_1/pattern_6 2.08932e-07	Pattern Name Homer Significance motif5.motif 4.97185e-07
Rest	Pattern Name Modisco Significance metacluster_1/pattern_19 5.32378e-17	Pattern Name Homer Significance motif27.motif 0.013034299999999999
Fosl1	Pattern Name Modisco Significance metacluster_1/pattern_5 5.00743e-06 metacluster_1/pattern_7 0.0118599	Pattern Name Homer Significance motif3.motif 0.000129105
Sp5	Pattern Name Modisco Significance metacluster_1/pattern_1 0.027642400000000004 metacluster_1/pattern_2 0.000136878	Pattern Name Homer Significance motif2.motif 0.019737599999999998
Tbx2	Pattern Name Modisco Significance metacluster_1/pattern_15 1.4929399999999999e-12	Pattern Name Homer Significance motif6.motif 4.70123e-06
Elf1	Pattern Name Modisco Significance metacluster_1/pattern_11 0.00107122	Pattern Name Homer Significance motif12.motif 0.0458161
Erg	Pattern Name Modisco Significance metacluster_1/pattern_11 0.00192242	Pattern Name Homer Significance motif12.motif 0.0244914
Klf1	Pattern Name Modisco Significance metacluster_1/pattern_1 0.0114477	Pattern Name Homer Significance motif2.motif 0.043012699999999994
Maff	Pattern Name Modisco Significance metacluster_1/pattern_5 0.00788488	Pattern Name Homer Significance motif3.motif 0.0128155
Crem	Pattern Name Modisco Significance metacluster_1/pattern_7 0.0037485999999999995	Pattern Name Homer Significance motif19.motif 0.0403594
Klf15	Pattern Name Modisco Significance metacluster_1/pattern_2 0.00507483	Pattern Name Homer Significance motif2.motif 0.00964738
Etv6	Pattern Name Modisco Significance metacluster_1/pattern_11 0.0129506	Pattern Name Homer Significance motif12.motif 0.055747500000000005
Nfyc	Pattern Name Modisco Significance metacluster_1/pattern_6 1.4134e-08	Pattern Name Homer Significance motif5.motif 4.97185e-07
Ctcf	Pattern Name Modisco Significance metacluster_1/pattern_0 3.62873e-15 metacluster_1/pattern_17 0.014058700000000002 metacluster_1/pattern_24 8.48009e-07	Pattern Name Homer Significance motif1.motif 5.03742e-05
Sp1	Pattern Name Modisco Significance metacluster_1/pattern_1 0.00016916700000000002 metacluster_1/pattern_2 0.044307599999999996 metacluster_1/pattern_12 0.0518885 metacluster_1/pattern_18 0.000452931	Pattern Name Homer Significance motif2.motif 0.00433185
Sox13	Pattern Name Modisco Significance metacluster_1/pattern_13 0.0471294	Pattern Name Homer Significance motif10.motif 0.0352176
Rfx7	Pattern Name Modisco Significance metacluster_1/pattern_9 0.00289365	Pattern Name Homer Significance motif20.motif 0.006794199999999999
Bach1	Pattern Name Modisco Significance metacluster_1/pattern_5 0.00154392	Pattern Name Homer Significance motif3.motif 0.00821721
Elk1	Pattern Name Modisco Significance metacluster_1/pattern_11 0.000896801	Pattern Name Homer Significance motif12.motif 0.0458161
Pbx3	Pattern Name Modisco Significance metacluster_1/pattern_6 1.05976e-05	Pattern Name Homer Significance motif5.motif 9.55964e-05
Mafb	Pattern Name Modisco Significance metacluster_1/pattern_5 0.008272700000000001 metacluster_1/pattern_7 0.00501104	Pattern Name Homer Significance motif3.motif 0.0130815 motif19.motif 0.018637400000000002
Zbtb1	Pattern Name Modisco Significance metacluster_1/pattern_1 0.041526	Pattern Name Homer Significance motif2.motif 0.0101713
Nanog	Pattern Name Modisco Significance metacluster_1/pattern_3 4.44553e-09 metacluster_1/pattern_16 0.0307546	Pattern Name Homer Significance motif4.motif 9.14606e-07 motif10.motif 0.0324203
Thap11	Pattern Name Modisco Significance metacluster_1/pattern_15 4.40862e-21	Pattern Name Homer Significance motif6.motif 3.0752900000000005e-08
Creb5	Pattern Name Modisco Significance metacluster_1/pattern_7 9.366e-05	Pattern Name Homer Significance motif19.motif 0.00812669
Klf6	Pattern Name Modisco Significance metacluster_1/pattern_1 0.000198835 metacluster_1/pattern_2 0.013206899999999999	Pattern Name Homer Significance motif2.motif 0.00046313800000000004
Ctcfl	Pattern Name Modisco Significance metacluster_1/pattern_0 1.01099e-09 metacluster_1/pattern_12 0.055470900000000004 metacluster_1/pattern_24 1.23751e-05	Pattern Name Homer Significance motif1.motif 0.000325423
Mafk	Pattern Name Modisco Significance metacluster_1/pattern_5 0.00264605	Pattern Name Homer Significance motif3.motif 0.024858900000000003
Sox6	Pattern Name Modisco Significance metacluster_1/pattern_13 0.008460700000000002	Pattern Name Homer Significance motif10.motif 0.0352176
Atf2	Pattern Name Modisco Significance metacluster_1/pattern_7 0.000486647	Pattern Name Homer Significance motif19.motif 0.0180354
Dbp	Pattern Name Modisco Significance metacluster_1/pattern_7 0.0403656	Pattern Name Homer Significance motif4.motif 0.058913099999999996

Unique TF-MoDISco TFs: #99

TF Name	Modisco	Homer
Alx3	Pattern Name Modisco Significance metacluster_1/pattern_16 0.057272699999999996	Absent
Tfeb	Pattern Name Modisco Significance metacluster_1/pattern_7 0.0501946	Absent
En1	Pattern Name Modisco Significance metacluster_1/pattern_16 0.057272699999999996	Absent
Sox9	Pattern Name Modisco Significance metacluster_1/pattern_13 0.027057799999999996	Absent
Sox3	Pattern Name Modisco Significance metacluster_1/pattern_13 0.015419899999999999	Absent
Grhl2	Pattern Name Modisco Significance metacluster_1/pattern_20 0.019375	Absent
Emx2	Pattern Name Modisco Significance metacluster_1/pattern_16 0.057272699999999996	Absent
Rhox6	Pattern Name Modisco Significance metacluster_1/pattern_16 0.0399621	Absent
Sox12	Pattern Name Modisco Significance metacluster_1/pattern_13 0.0163699	Absent
Elf3	Pattern Name Modisco Significance metacluster_1/pattern_11 0.0368724	Absent
Etv2	Pattern Name Modisco Significance metacluster_1/pattern_11 0.00461116	Absent
Mitf	Pattern Name Modisco Significance metacluster_1/pattern_7 0.0272406	Absent
Sox21	Pattern Name Modisco Significance metacluster_1/pattern_13 0.0520362	Absent
Tead4	Pattern Name Modisco Significance metacluster_1/pattern_8 0.00135408	Absent
Tfec	Pattern Name Modisco Significance metacluster_1/pattern_7 0.0361418	Absent
Sebox	Pattern Name Modisco Significance metacluster_1/pattern_16 0.0584442	Absent
Nfil3	Pattern Name Modisco Significance metacluster_1/pattern_7 0.0375676	Absent
Esx1	Pattern Name Modisco Significance metacluster_1/pattern_16 0.0399505	Absent
Wt1	Pattern Name Modisco Significance metacluster_1/pattern_2 0.00188175 metacluster_1/pattern_18 0.0375259	Absent
Rela	Pattern Name Modisco Significance metacluster_1/pattern_2 0.0535869	Absent
Six2	Pattern Name Modisco Significance metacluster_1/pattern_14 1.59502e-06	Absent
Shox2	Pattern Name Modisco Significance metacluster_1/pattern_16 0.0399621	Absent
Sox17	Pattern Name Modisco Significance metacluster_1/pattern_13 0.008460700000000002	Absent
Tfe3	Pattern Name Modisco Significance metacluster_1/pattern_7 0.052000199999999996	Absent
Lbx2	Pattern Name Modisco Significance metacluster_1/pattern_16 0.0399505	Absent
XP_911724.4	Pattern Name Modisco Significance metacluster_1/pattern_11 0.00292161	Absent
Mlx	Pattern Name Modisco Significance metacluster_1/pattern_7 0.050673800000000005	Absent
Alx4	Pattern Name Modisco Significance metacluster_1/pattern_16 0.0418372	Absent
Vsx2	Pattern Name Modisco Significance metacluster_1/pattern_16 0.0307546	Absent
Usf1	Pattern Name Modisco Significance metacluster_1/pattern_7 0.00375424	Absent
Maz	Pattern Name Modisco Significance metacluster_1/pattern_2 0.00109364 metacluster_1/pattern_18 0.0382971	Absent
Hoxd3	Pattern Name Modisco Significance metacluster_1/pattern_16 0.0584442	Absent
Mnx1	Pattern Name Modisco Significance metacluster_1/pattern_16 0.0358473	Absent
Arntl	Pattern Name Modisco Significance metacluster_1/pattern_7 0.0475284	Absent
Spic	Pattern Name Modisco Significance metacluster_1/pattern_11 0.0557498	Absent
Zfx	Pattern Name Modisco Significance metacluster_1/pattern_1 0.055565199999999995 metacluster_1/pattern_12 0.004142100000000001 metacluster_1/pattern_18 0.00596039	Absent
Mxi1	Pattern Name Modisco Significance metacluster_1/pattern_18 0.0382971	Absent
Prrx1	Pattern Name Modisco Significance metacluster_1/pattern_16 0.0399621	Absent
Alx1	Pattern Name Modisco Significance metacluster_1/pattern_16 0.0418372	Absent
Six1	Pattern Name Modisco Significance metacluster_1/pattern_14 3.03661e-05	Absent
Sox8	Pattern Name Modisco Significance metacluster_1/pattern_13 0.015419899999999999	Absent
Sox14	Pattern Name Modisco Significance metacluster_1/pattern_13 0.00893707	Absent
Sall4	Pattern Name Modisco Significance metacluster_1/pattern_1 0.0404508 metacluster_1/pattern_2 0.0356496	Absent
Six4	Pattern Name Modisco Significance metacluster_1/pattern_14 1.59502e-06	Absent
Prop1	Pattern Name Modisco Significance metacluster_1/pattern_16 0.0584442	Absent
Tef	Pattern Name Modisco Significance metacluster_1/pattern_7 0.0131011	Absent
Sox18	Pattern Name Modisco Significance metacluster_1/pattern_13 0.024019	Absent
Hlf	Pattern Name Modisco Significance metacluster_1/pattern_7 0.0117402	Absent
Arx	Pattern Name Modisco Significance metacluster_1/pattern_16 0.0399505	Absent
Barhl2	Pattern Name Modisco Significance metacluster_1/pattern_16 0.0584442	Absent
Nobox	Pattern Name Modisco Significance metacluster_1/pattern_16 0.057272699999999996	Absent
Creb3l2	Pattern Name Modisco Significance metacluster_1/pattern_7 0.00657661	Absent
Uncx	Pattern Name Modisco Significance metacluster_1/pattern_16 0.057272699999999996	Absent
Tead1	Pattern Name Modisco Significance metacluster_1/pattern_8 0.00871739	Absent
Zfp42	Pattern Name Modisco Significance metacluster_1/pattern_18 0.0184146	Absent
Srebf2	Pattern Name Modisco Significance metacluster_1/pattern_2 0.0548111 metacluster_1/pattern_7 0.05395369999999999	Absent
Hoxa3	Pattern Name Modisco Significance metacluster_1/pattern_16 0.0584442	Absent
Lhx3	Pattern Name Modisco Significance metacluster_1/pattern_16 0.0584442	Absent
Pou2f1	Pattern Name Modisco Significance metacluster_1/pattern_3 0.057188800000000005	Absent
Nfatc1	Pattern Name Modisco Significance metacluster_1/pattern_5 0.027247399999999998	Absent
Lhx2	Pattern Name Modisco Significance metacluster_1/pattern_16 0.0341137	Absent
Spi1	Pattern Name Modisco Significance metacluster_1/pattern_11 0.0557498	Absent
Lhx9	Pattern Name Modisco Significance metacluster_1/pattern_16 0.0349385	Absent
Msx3	Pattern Name Modisco Significance metacluster_1/pattern_16 0.0399621	Absent
Cebpb	Pattern Name Modisco Significance metacluster_1/pattern_7 0.05395369999999999	Absent
Zfp740	Pattern Name Modisco Significance metacluster_1/pattern_1 0.028893799999999997 metacluster_1/pattern_2 0.021031599999999998	Absent
Sox11	Pattern Name Modisco Significance metacluster_1/pattern_13 0.0299642	Absent
Xbp1	Pattern Name Modisco Significance metacluster_1/pattern_7 0.050673800000000005	Absent
Lhx4	Pattern Name Modisco Significance metacluster_1/pattern_16 0.0584442	Absent
Hand1	Pattern Name Modisco Significance metacluster_1/pattern_16 0.0358473	Absent
Tead2	Pattern Name Modisco Significance metacluster_1/pattern_8 0.00412703	Absent
Egr3	Pattern Name Modisco Significance metacluster_1/pattern_1 0.05317569999999999	Absent
Taf1	Pattern Name Modisco Significance metacluster_1/pattern_18 7.19745e-06	Absent
Srebf1	Pattern Name Modisco Significance metacluster_1/pattern_7 0.0275438	Absent
Gbx2	Pattern Name Modisco Significance metacluster_1/pattern_16 0.0399505	Absent
Zic2	Pattern Name Modisco Significance metacluster_1/pattern_10 4.80799e-13 metacluster_1/pattern_24 0.039732199999999995	Absent
Pax6	Pattern Name Modisco Significance metacluster_1/pattern_16 0.0399505	Absent
Atf4	Pattern Name Modisco Significance metacluster_1/pattern_7 0.05395369999999999	Absent
Bcl6	Pattern Name Modisco Significance metacluster_1/pattern_2 0.043776999999999996	Absent
Lef1	Pattern Name Modisco Significance metacluster_1/pattern_3 0.0226752 metacluster_1/pattern_16 0.032394900000000004	Absent
Lhx5	Pattern Name Modisco Significance metacluster_1/pattern_16 0.0584442	Absent
Sox7	Pattern Name Modisco Significance metacluster_1/pattern_13 0.015419899999999999	Absent
Lhx1	Pattern Name Modisco Significance metacluster_1/pattern_16 0.0584442	Absent
Nkx1-1	Pattern Name Modisco Significance metacluster_1/pattern_16 0.057272699999999996	Absent
Prrx2	Pattern Name Modisco Significance metacluster_1/pattern_16 0.0399621	Absent
Otp	Pattern Name Modisco Significance metacluster_1/pattern_16 0.0584442	Absent
Yy1	Pattern Name Modisco Significance metacluster_1/pattern_18 2.8238699999999998e-05	Absent
Spdef	Pattern Name Modisco Significance metacluster_1/pattern_11 0.0294209	Absent
Etv3	Pattern Name Modisco Significance metacluster_1/pattern_11 0.00283493	Absent
Gbx1	Pattern Name Modisco Significance metacluster_1/pattern_16 0.0399621	Absent
Maf	Pattern Name Modisco Significance metacluster_1/pattern_5 0.016083	Absent
Sry	Pattern Name Modisco Significance metacluster_1/pattern_13 0.0247111	Absent
Zic1	Pattern Name Modisco Significance metacluster_1/pattern_10 0.036339800000000005	Absent
En2	Pattern Name Modisco Significance metacluster_1/pattern_16 0.0584442	Absent
Msx2	Pattern Name Modisco Significance metacluster_1/pattern_16 0.0399621	Absent
Bhlhe40	Pattern Name Modisco Significance metacluster_1/pattern_7 0.028166200000000002	Absent
Zic3	Pattern Name Modisco Significance metacluster_1/pattern_10 0.0277431 metacluster_1/pattern_24 0.047617	Absent
Cebpa	Pattern Name Modisco Significance metacluster_1/pattern_7 0.0565636	Absent
Sox4	Pattern Name Modisco Significance metacluster_1/pattern_13 0.0344262	Absent

Unique Homer TFs: #5

TF Name	Modisco	Homer
Nfib	Absent	Pattern Name Homer Significance motif20.motif 0.0517775
Nr2c1	Absent	Pattern Name Homer Significance motif19.motif 0.036617800000000006
E2f6	Absent	Pattern Name Homer Significance motif2.motif 0.0368431
E2f7	Absent	Pattern Name Homer Significance motif2.motif 0.0101713
Stat4	Absent	Pattern Name Homer Significance motif20.motif 0.0416286