In [1]:
# Parameters
data_name = "BRN;PTMN;A;CL"
modisco_root = "/srv/scratch/msharmin/mouse_hem/with_tfd/full_mouse50/Naive_modisco2019"
tomtom_report_root = "http://mitra.stanford.edu/kundaje/msharmin/report/tomtom_outs/cells"
task_dir = "task_69-naivegw"
perf_file = "/srv/scratch/msharmin/mouse_hem/with_tfd/full_mouse50/fineFactorized/task_69-naivegw/NaiveauPRC.txt"
homer_root = "/srv/scratch/msharmin/mouse_hem/with_tfd/full_mouse50/Naive_scans"
reportfile = "/mnt/lab_data/kundaje/msharmin/annotations/filtering samples_MS2.xlsx"
sheetname = "filter23"
In [2]:
from matlas.reports import display_metadata
load data from labcluster
Using TensorFlow backend.
2019-08-30 18:55:42,023 [WARNING] git-lfs not installed
In [3]:
display_metadata(data_name, perf_file, reportfile, sheetname)
    Sample Information
    MetaData NameDescription
    Cell typeBrain- Putamen
    Cell GroupNeural Cells and Tissues
    Experiment NameATAC
    Experiment GroupCasellas Lab
    Pipeline Output
    replicateNaïve overlap peaksIDR peaksTSS enrichment (< 8 is very poor <10 is low)Final number of unique mapping, dup-filtered, chrM filtered readsNumber of reads in called peak regionsFraction of reads in called peak regionsNumber of reads in promoter regionsFraction of reads in promoter regionsNumber of reads in enhancer regionsFraction of reads in enhancer regions
    rep11440438367010.28755474897181428460.148854666710.0999216888270.3963
    Modelling Metadata
    MetricValue
    auPRC0.6488
    Calibrated Recall at 50% FDR0.227
    Number of Positive Examples in Test Data99284
    Number of Negative Examples in Test Data7971567
    Imbalance Ratio in Test Data0.0123
    Test Chromosomeschr2, chr3, chr19
In [4]:
from matlas.reports import display_paiwise_pattern_comparison
from matlas.reports import display_denovo_patterns
In [5]:
display_denovo_patterns(data_name, modisco_root=modisco_root)
TF-MoDISco is using the TensorFlow backend.
The following two links show list of Denovo Patterns and corresponding Motifs discovered by TF-MoDISco
Click here for Denovo Patterns by TF-MoDISco: #26
Pattern NameTF Name(s)Modisco
metacluster_1/pattern_0 # seqlets: 4993 SequenceContrib ScoresHyp_Contrib Scores
Egr2, Egr3, Egr1, Zbtb17, Zfp281, Klf6, Klf1, Sp4, Sp1, Sp5,

Zfp740, Gli3
metacluster_1/pattern_1 # seqlets: 2497 SequenceContrib ScoresHyp_Contrib Scores
Ctcf, Ctcfl
metacluster_1/pattern_2 # seqlets: 2143 SequenceContrib ScoresHyp_Contrib Scores
Sp2, Sp3, Klf3, Zfx, Wt1, Klf15, Klf5, Maz, Usf2, Fli1,

Mxi1, Klf4, Klf7, Elk4, Mbd2, Klf12, Tfap2b, E2f1, Klf8, E2f3, Fev,

E2f4, Rfx1, Nr1h4, Nhlh1, Ptf1a
metacluster_1/pattern_3 # seqlets: 1751 SequenceContrib ScoresHyp_Contrib Scores
Nrf1
metacluster_1/pattern_4 # seqlets: 1418 SequenceContrib ScoresHyp_Contrib Scores
Rfx2, Rfx3, Rfx4, Rfx7, Rfx6
metacluster_1/pattern_5 # seqlets: 1267 SequenceContrib ScoresHyp_Contrib Scores
Nfyb, Nfyc, Nfya, Pbx3, Foxi1
metacluster_1/pattern_6 # seqlets: 1050 SequenceContrib ScoresHyp_Contrib Scores
Mef2d, Mef2a, Mef2c
metacluster_1/pattern_7 # seqlets: 959 SequenceContrib ScoresHyp_Contrib Scores
Fosl2, Batf, Jdp2, Fosb, Fos, Jund, Junb, Atf3, Fosl1, Jun,

Bach2, Bach1, Nfe2, Nfe2l2, Mafa, Mafk
metacluster_1/pattern_8 # seqlets: 907 SequenceContrib ScoresHyp_Contrib Scores
Gabpa, Elk1, Erg, Ets1, Elf1, Elk3, Etv5, Etv2, Etv4, Etv1,

Etv6, Ehf, Etv3, Elf2, XP_911724.4, Elf5, Elf4, Elf3, Spi1, Spdef
metacluster_1/pattern_9 # seqlets: 783 SequenceContrib ScoresHyp_Contrib Scores
Creb1, Creb5, Atf7, Atf1, Atf2, Crem, Mafb, Nfil3, Tef, Dbp,

Rxrb, Hlf, Gmeb2, Cebpb, Cebpa, Gmeb1
metacluster_1/pattern_10 # seqlets: 780 SequenceContrib ScoresHyp_Contrib Scores
Nfib, Nfia, Nfic
metacluster_1/pattern_11 # seqlets: 671 SequenceContrib ScoresHyp_Contrib Scores
Taf1, Yy1, Zfp42
metacluster_1/pattern_12 # seqlets: 473 SequenceContrib ScoresHyp_Contrib Scores
Usf1, Tfe3, Tfec, Tfeb, Arntl, Mitf, Bhlhe40, Srebf1, Clock, Arnt,

Mlx, Npas2, Srebf2, Tcfl5, Max, Mycn, Creb3l2, Bhlhe41, Myc, Mlxip, Xbp1
metacluster_1/pattern_13 # seqlets: 383 SequenceContrib ScoresHyp_Contrib Scores
Zfp143, Thap11, Tbx2
metacluster_1/pattern_14 # seqlets: 340 SequenceContrib ScoresHyp_Contrib Scores
metacluster_1/pattern_15 # seqlets: 304 SequenceContrib ScoresHyp_Contrib Scores
Tgif1, Meis2, Meis1, Meis3, Snai1, Pknox1, Tgif2, Tbx20, Pknox2, Pbx1
metacluster_1/pattern_16 # seqlets: 186 SequenceContrib ScoresHyp_Contrib Scores
Sox9, Sox10, Sox2, Sox3, Sox4, Sox6, Sox17
metacluster_1/pattern_17 # seqlets: 168 SequenceContrib ScoresHyp_Contrib Scores
Pou2f2, Pou2f1, Pou5f1
metacluster_1/pattern_18 # seqlets: 161 SequenceContrib ScoresHyp_Contrib Scores
Tal1
metacluster_1/pattern_19 # seqlets: 139 SequenceContrib ScoresHyp_Contrib Scores
Zbtb33
metacluster_1/pattern_20 # seqlets: 100 SequenceContrib ScoresHyp_Contrib Scores
metacluster_1/pattern_21 # seqlets: 53 SequenceContrib ScoresHyp_Contrib Scores
Cebpg, Cebpd, Ddit3, Atf4, Pou3f3, Cebpe
metacluster_1/pattern_22 # seqlets: 49 SequenceContrib ScoresHyp_Contrib Scores
metacluster_1/pattern_23 # seqlets: 43 SequenceContrib ScoresHyp_Contrib Scores
metacluster_1/pattern_24 # seqlets: 42 SequenceContrib ScoresHyp_Contrib Scores
Pou3f1, Pou3f2
metacluster_1/pattern_25 # seqlets: 36 SequenceContrib ScoresHyp_Contrib Scores
Click here for Motifs by TF-MoDISco: #166
TF NamePattern(s)
Egr2
Pattern NameModiscoSignificance
metacluster_1/pattern_00.0143476
metacluster_1/pattern_20.029908299999999995
metacluster_1/pattern_110.0399022
Egr3
Pattern NameModiscoSignificance
metacluster_1/pattern_00.025705000000000002
Egr1
Pattern NameModiscoSignificance
metacluster_1/pattern_00.046994
metacluster_1/pattern_20.014544999999999999
Zbtb17
Pattern NameModiscoSignificance
metacluster_1/pattern_00.00186088
metacluster_1/pattern_20.000225885
metacluster_1/pattern_110.00710452
Zfp281
Pattern NameModiscoSignificance
metacluster_1/pattern_00.025892900000000003
metacluster_1/pattern_20.0170329
Klf6
Pattern NameModiscoSignificance
metacluster_1/pattern_00.0171852
metacluster_1/pattern_22.60669e-05
Klf1
Pattern NameModiscoSignificance
metacluster_1/pattern_00.0171852
metacluster_1/pattern_20.000621542
Sp4
Pattern NameModiscoSignificance
metacluster_1/pattern_00.0377099
metacluster_1/pattern_20.0226059
Sp1
Pattern NameModiscoSignificance
metacluster_1/pattern_00.0594312
metacluster_1/pattern_20.00373083
metacluster_1/pattern_117.39267e-05
metacluster_1/pattern_190.00841622
Sp5
Pattern NameModiscoSignificance
metacluster_1/pattern_00.0456179
metacluster_1/pattern_22.70529e-05
Zfp740
Pattern NameModiscoSignificance
metacluster_1/pattern_00.0497985
Gli3
Pattern NameModiscoSignificance
metacluster_1/pattern_00.0497985
Ctcf
Pattern NameModiscoSignificance
metacluster_1/pattern_14.60404e-10
metacluster_1/pattern_20.058438
Ctcfl
Pattern NameModiscoSignificance
metacluster_1/pattern_15.62115e-11
metacluster_1/pattern_20.00884311
Sp2
Pattern NameModiscoSignificance
metacluster_1/pattern_21.1985099999999998e-15
metacluster_1/pattern_117.39267e-05
metacluster_1/pattern_180.0372218
metacluster_1/pattern_190.00245433
Sp3
Pattern NameModiscoSignificance
metacluster_1/pattern_22.10847e-10
metacluster_1/pattern_110.00144104
metacluster_1/pattern_190.00224432
Klf3
Pattern NameModiscoSignificance
metacluster_1/pattern_21.95112e-08
metacluster_1/pattern_110.0383124
metacluster_1/pattern_190.00656487
Zfx
Pattern NameModiscoSignificance
metacluster_1/pattern_20.00395486
metacluster_1/pattern_110.00186142
metacluster_1/pattern_180.023438499999999998
metacluster_1/pattern_190.00155993
metacluster_1/pattern_200.0113741
Wt1
Pattern NameModiscoSignificance
metacluster_1/pattern_21.3046099999999999e-05
metacluster_1/pattern_110.0219959
Klf15
Pattern NameModiscoSignificance
metacluster_1/pattern_20.00106181
Klf5
Pattern NameModiscoSignificance
metacluster_1/pattern_20.00136323
Maz
Pattern NameModiscoSignificance
metacluster_1/pattern_20.00136323
metacluster_1/pattern_110.0327116
Usf2
Pattern NameModiscoSignificance
metacluster_1/pattern_20.00160278
metacluster_1/pattern_110.055418499999999996
metacluster_1/pattern_120.00509316
metacluster_1/pattern_190.00584084
Fli1
Pattern NameModiscoSignificance
metacluster_1/pattern_20.00375233
metacluster_1/pattern_80.00412859
Mxi1
Pattern NameModiscoSignificance
metacluster_1/pattern_20.0114642
metacluster_1/pattern_110.0327116
Klf4
Pattern NameModiscoSignificance
metacluster_1/pattern_20.0387535
Klf7
Pattern NameModiscoSignificance
metacluster_1/pattern_20.0160086
Elk4
Pattern NameModiscoSignificance
metacluster_1/pattern_20.0269983
metacluster_1/pattern_80.00255979
Mbd2
Pattern NameModiscoSignificance
metacluster_1/pattern_20.0293629
Klf12
Pattern NameModiscoSignificance
metacluster_1/pattern_20.0387535
Tfap2b
Pattern NameModiscoSignificance
metacluster_1/pattern_20.040800199999999995
E2f1
Pattern NameModiscoSignificance
metacluster_1/pattern_20.0417086
Klf8
Pattern NameModiscoSignificance
metacluster_1/pattern_20.0417086
E2f3
Pattern NameModiscoSignificance
metacluster_1/pattern_20.0417086
Fev
Pattern NameModiscoSignificance
metacluster_1/pattern_20.0446604
metacluster_1/pattern_80.00108819
E2f4
Pattern NameModiscoSignificance
metacluster_1/pattern_20.0454536
Rfx1
Pattern NameModiscoSignificance
metacluster_1/pattern_20.046687900000000004
metacluster_1/pattern_44.94498e-06
metacluster_1/pattern_110.00685693
Nr1h4
Pattern NameModiscoSignificance
metacluster_1/pattern_20.047735900000000005
Nhlh1
Pattern NameModiscoSignificance
metacluster_1/pattern_20.0573702
Ptf1a
Pattern NameModiscoSignificance
metacluster_1/pattern_20.05747000000000001
Nrf1
Pattern NameModiscoSignificance
metacluster_1/pattern_32.6342599999999998e-08
Rfx2
Pattern NameModiscoSignificance
metacluster_1/pattern_40.0582045
Rfx3
Pattern NameModiscoSignificance
metacluster_1/pattern_40.015502200000000002
Rfx4
Pattern NameModiscoSignificance
metacluster_1/pattern_44.7379399999999996e-05
Rfx7
Pattern NameModiscoSignificance
metacluster_1/pattern_40.00578354
Rfx6
Pattern NameModiscoSignificance
metacluster_1/pattern_40.0180838
Nfyb
Pattern NameModiscoSignificance
metacluster_1/pattern_57.950420000000001e-13
Nfyc
Pattern NameModiscoSignificance
metacluster_1/pattern_51.99061e-09
Nfya
Pattern NameModiscoSignificance
metacluster_1/pattern_53.3535499999999996e-08
Pbx3
Pattern NameModiscoSignificance
metacluster_1/pattern_53.0361400000000003e-06
Foxi1
Pattern NameModiscoSignificance
metacluster_1/pattern_51.10225e-05
Mef2d
Pattern NameModiscoSignificance
metacluster_1/pattern_69.439e-11
Mef2a
Pattern NameModiscoSignificance
metacluster_1/pattern_63.5868699999999995e-06
Mef2c
Pattern NameModiscoSignificance
metacluster_1/pattern_61.1586e-09
Fosl2
Pattern NameModiscoSignificance
metacluster_1/pattern_74.50971e-05
metacluster_1/pattern_90.050850099999999995
Batf
Pattern NameModiscoSignificance
metacluster_1/pattern_70.0107691
Jdp2
Pattern NameModiscoSignificance
metacluster_1/pattern_72.75593e-05
metacluster_1/pattern_90.000819367
metacluster_1/pattern_120.0543387
Fosb
Pattern NameModiscoSignificance
metacluster_1/pattern_72.75593e-05
Fos
Pattern NameModiscoSignificance
metacluster_1/pattern_72.8681100000000002e-05
Jund
Pattern NameModiscoSignificance
metacluster_1/pattern_70.00235174
metacluster_1/pattern_90.0447103
Junb
Pattern NameModiscoSignificance
metacluster_1/pattern_70.014956299999999999
metacluster_1/pattern_90.0437612
Atf3
Pattern NameModiscoSignificance
metacluster_1/pattern_74.6909399999999995e-05
metacluster_1/pattern_90.0447103
Fosl1
Pattern NameModiscoSignificance
metacluster_1/pattern_70.03505080000000001
metacluster_1/pattern_90.028451900000000002
Jun
Pattern NameModiscoSignificance
metacluster_1/pattern_70.0240715
metacluster_1/pattern_90.023238400000000003
Bach2
Pattern NameModiscoSignificance
metacluster_1/pattern_70.00712039
Bach1
Pattern NameModiscoSignificance
metacluster_1/pattern_70.0107691
Nfe2
Pattern NameModiscoSignificance
metacluster_1/pattern_70.0127662
Nfe2l2
Pattern NameModiscoSignificance
metacluster_1/pattern_70.0134963
Mafa
Pattern NameModiscoSignificance
metacluster_1/pattern_70.034148000000000005
Mafk
Pattern NameModiscoSignificance
metacluster_1/pattern_70.05909059999999999
Gabpa
Pattern NameModiscoSignificance
metacluster_1/pattern_80.00244474
Elk1
Pattern NameModiscoSignificance
metacluster_1/pattern_80.0018893
Erg
Pattern NameModiscoSignificance
metacluster_1/pattern_80.00412859
Ets1
Pattern NameModiscoSignificance
metacluster_1/pattern_80.00368878
Elf1
Pattern NameModiscoSignificance
metacluster_1/pattern_84.15401e-05
Elk3
Pattern NameModiscoSignificance
metacluster_1/pattern_80.00156909
Etv5
Pattern NameModiscoSignificance
metacluster_1/pattern_80.001057
Etv2
Pattern NameModiscoSignificance
metacluster_1/pattern_80.00173418
Etv4
Pattern NameModiscoSignificance
metacluster_1/pattern_80.00770439
Etv1
Pattern NameModiscoSignificance
metacluster_1/pattern_80.00299183
Etv6
Pattern NameModiscoSignificance
metacluster_1/pattern_80.0375327
Ehf
Pattern NameModiscoSignificance
metacluster_1/pattern_80.00779686
Etv3
Pattern NameModiscoSignificance
metacluster_1/pattern_80.00558885
Elf2
Pattern NameModiscoSignificance
metacluster_1/pattern_80.0190162
XP_911724.4
Pattern NameModiscoSignificance
metacluster_1/pattern_80.00624663
Elf5
Pattern NameModiscoSignificance
metacluster_1/pattern_80.056791499999999995
Elf4
Pattern NameModiscoSignificance
metacluster_1/pattern_80.011471799999999999
Elf3
Pattern NameModiscoSignificance
metacluster_1/pattern_80.030642400000000004
Spi1
Pattern NameModiscoSignificance
metacluster_1/pattern_80.0375327
Spdef
Pattern NameModiscoSignificance
metacluster_1/pattern_80.0228929
Creb1
Pattern NameModiscoSignificance
metacluster_1/pattern_90.000257764
metacluster_1/pattern_120.0420561
Creb5
Pattern NameModiscoSignificance
metacluster_1/pattern_99.60365e-05
Atf7
Pattern NameModiscoSignificance
metacluster_1/pattern_90.00015526
metacluster_1/pattern_120.0230801
Atf1
Pattern NameModiscoSignificance
metacluster_1/pattern_90.039081599999999994
metacluster_1/pattern_120.0166203
Atf2
Pattern NameModiscoSignificance
metacluster_1/pattern_90.000636828
metacluster_1/pattern_120.0537632
Crem
Pattern NameModiscoSignificance
metacluster_1/pattern_90.00112255
Mafb
Pattern NameModiscoSignificance
metacluster_1/pattern_90.00483039
Nfil3
Pattern NameModiscoSignificance
metacluster_1/pattern_90.00663753
metacluster_1/pattern_140.0238019
Tef
Pattern NameModiscoSignificance
metacluster_1/pattern_90.011171700000000001
Dbp
Pattern NameModiscoSignificance
metacluster_1/pattern_90.028451900000000002
metacluster_1/pattern_120.0463864
metacluster_1/pattern_140.041240399999999997
metacluster_1/pattern_210.059602999999999996
Rxrb
Pattern NameModiscoSignificance
metacluster_1/pattern_90.0335328
Hlf
Pattern NameModiscoSignificance
metacluster_1/pattern_90.033556300000000004
metacluster_1/pattern_120.029179700000000003
Gmeb2
Pattern NameModiscoSignificance
metacluster_1/pattern_90.033556300000000004
Cebpb
Pattern NameModiscoSignificance
metacluster_1/pattern_90.049022699999999995
metacluster_1/pattern_210.059602999999999996
Cebpa
Pattern NameModiscoSignificance
metacluster_1/pattern_90.050850099999999995
metacluster_1/pattern_210.059602999999999996
Gmeb1
Pattern NameModiscoSignificance
metacluster_1/pattern_90.052341399999999996
Nfib
Pattern NameModiscoSignificance
metacluster_1/pattern_102.43409e-07
Nfia
Pattern NameModiscoSignificance
metacluster_1/pattern_100.000431762
Nfic
Pattern NameModiscoSignificance
metacluster_1/pattern_100.00521317
Taf1
Pattern NameModiscoSignificance
metacluster_1/pattern_114.21953e-06
Yy1
Pattern NameModiscoSignificance
metacluster_1/pattern_114.61982e-06
Zfp42
Pattern NameModiscoSignificance
metacluster_1/pattern_110.00710452
Usf1
Pattern NameModiscoSignificance
metacluster_1/pattern_120.00442295
Tfe3
Pattern NameModiscoSignificance
metacluster_1/pattern_120.00205374
Tfec
Pattern NameModiscoSignificance
metacluster_1/pattern_120.00201951
Tfeb
Pattern NameModiscoSignificance
metacluster_1/pattern_120.000498712
Arntl
Pattern NameModiscoSignificance
metacluster_1/pattern_120.00621155
Mitf
Pattern NameModiscoSignificance
metacluster_1/pattern_120.00112515
Bhlhe40
Pattern NameModiscoSignificance
metacluster_1/pattern_120.00711671
Srebf1
Pattern NameModiscoSignificance
metacluster_1/pattern_120.0244427
Clock
Pattern NameModiscoSignificance
metacluster_1/pattern_120.0244427
Arnt
Pattern NameModiscoSignificance
metacluster_1/pattern_120.028575299999999998
Mlx
Pattern NameModiscoSignificance
metacluster_1/pattern_120.013828799999999999
Npas2
Pattern NameModiscoSignificance
metacluster_1/pattern_120.00345182
Srebf2
Pattern NameModiscoSignificance
metacluster_1/pattern_120.00377041
Tcfl5
Pattern NameModiscoSignificance
metacluster_1/pattern_120.00576405
Max
Pattern NameModiscoSignificance
metacluster_1/pattern_120.01063
Mycn
Pattern NameModiscoSignificance
metacluster_1/pattern_120.0113375
Creb3l2
Pattern NameModiscoSignificance
metacluster_1/pattern_120.0239253
Bhlhe41
Pattern NameModiscoSignificance
metacluster_1/pattern_120.0159861
Myc
Pattern NameModiscoSignificance
metacluster_1/pattern_120.0200214
Mlxip
Pattern NameModiscoSignificance
metacluster_1/pattern_120.042329000000000006
Xbp1
Pattern NameModiscoSignificance
metacluster_1/pattern_120.0581924
Zfp143
Pattern NameModiscoSignificance
metacluster_1/pattern_131.69278e-20
Thap11
Pattern NameModiscoSignificance
metacluster_1/pattern_138.166e-20
Tbx2
Pattern NameModiscoSignificance
metacluster_1/pattern_131.24756e-12
Tgif1
Pattern NameModiscoSignificance
metacluster_1/pattern_150.00462071
Meis2
Pattern NameModiscoSignificance
metacluster_1/pattern_150.0338188
Meis1
Pattern NameModiscoSignificance
metacluster_1/pattern_150.022897900000000002
Meis3
Pattern NameModiscoSignificance
metacluster_1/pattern_150.033694
Snai1
Pattern NameModiscoSignificance
metacluster_1/pattern_150.0121798
Pknox1
Pattern NameModiscoSignificance
metacluster_1/pattern_150.032563
Tgif2
Pattern NameModiscoSignificance
metacluster_1/pattern_150.0121798
Tbx20
Pattern NameModiscoSignificance
metacluster_1/pattern_150.032563
Pknox2
Pattern NameModiscoSignificance
metacluster_1/pattern_150.032563
Pbx1
Pattern NameModiscoSignificance
metacluster_1/pattern_150.032563
Sox9
Pattern NameModiscoSignificance
metacluster_1/pattern_169.69368e-17
Sox10
Pattern NameModiscoSignificance
metacluster_1/pattern_160.000244648
Sox2
Pattern NameModiscoSignificance
metacluster_1/pattern_160.000322571
Sox3
Pattern NameModiscoSignificance
metacluster_1/pattern_160.00794456
Sox4
Pattern NameModiscoSignificance
metacluster_1/pattern_160.032793699999999995
Sox6
Pattern NameModiscoSignificance
metacluster_1/pattern_160.0152393
Sox17
Pattern NameModiscoSignificance
metacluster_1/pattern_160.032793699999999995
Pou2f2
Pattern NameModiscoSignificance
metacluster_1/pattern_170.00129243
metacluster_1/pattern_242.4924499999999998e-05
Pou2f1
Pattern NameModiscoSignificance
metacluster_1/pattern_170.00272691
Pou5f1
Pattern NameModiscoSignificance
metacluster_1/pattern_170.0233597
Tal1
Pattern NameModiscoSignificance
metacluster_1/pattern_180.023438499999999998
Zbtb33
Pattern NameModiscoSignificance
metacluster_1/pattern_192.1293600000000002e-05
Cebpg
Pattern NameModiscoSignificance
metacluster_1/pattern_210.059602999999999996
Cebpd
Pattern NameModiscoSignificance
metacluster_1/pattern_210.05964169999999999
Ddit3
Pattern NameModiscoSignificance
metacluster_1/pattern_210.059602999999999996
Atf4
Pattern NameModiscoSignificance
metacluster_1/pattern_210.059602999999999996
Pou3f3
Pattern NameModiscoSignificance
metacluster_1/pattern_210.059602999999999996
Cebpe
Pattern NameModiscoSignificance
metacluster_1/pattern_210.059602999999999996
Pou3f1
Pattern NameModiscoSignificance
metacluster_1/pattern_245.01103e-06
Pou3f2
Pattern NameModiscoSignificance
metacluster_1/pattern_245.01103e-06
In [6]:
display_paiwise_pattern_comparison(data_name, modisco_root, homer_root)
Number of CISBP TFs obtained by TF-MoDISco and Homer
Shared TFs between TF-MoDISco and Homer: #79
TF NameModiscoHomer
Nfya
Pattern NameModiscoSignificance
metacluster_1/pattern_53.3535499999999996e-08
Pattern NameHomerSignificance
motif11.motif1.1311500000000002e-05
Mef2c
Pattern NameModiscoSignificance
metacluster_1/pattern_61.1586e-09
Pattern NameHomerSignificance
motif6.motif3.5615e-09
Ehf
Pattern NameModiscoSignificance
metacluster_1/pattern_80.00779686
Pattern NameHomerSignificance
motif14.motif0.033087
Rfx6
Pattern NameModiscoSignificance
metacluster_1/pattern_40.0180838
Pattern NameHomerSignificance
motif4.motif0.0404249
Sp1
Pattern NameModiscoSignificance
metacluster_1/pattern_00.0594312
metacluster_1/pattern_20.00373083
metacluster_1/pattern_117.39267e-05
metacluster_1/pattern_190.00841622
Pattern NameHomerSignificance
motif1.motif0.0336495
Nfe2
Pattern NameModiscoSignificance
metacluster_1/pattern_70.0127662
Pattern NameHomerSignificance
motif3.motif0.013616999999999999
Fosb
Pattern NameModiscoSignificance
metacluster_1/pattern_72.75593e-05
Pattern NameHomerSignificance
motif3.motif0.000125079
Nfyc
Pattern NameModiscoSignificance
metacluster_1/pattern_51.99061e-09
Pattern NameHomerSignificance
motif11.motif1.1311500000000002e-05
Elk3
Pattern NameModiscoSignificance
metacluster_1/pattern_80.00156909
Pattern NameHomerSignificance
motif14.motif0.017652099999999997
Ets1
Pattern NameModiscoSignificance
metacluster_1/pattern_80.00368878
Pattern NameHomerSignificance
motif14.motif0.033087
Etv1
Pattern NameModiscoSignificance
metacluster_1/pattern_80.00299183
Pattern NameHomerSignificance
motif14.motif0.0200953
Tbx2
Pattern NameModiscoSignificance
metacluster_1/pattern_131.24756e-12
Pattern NameHomerSignificance
motif5.motif1.8061000000000002e-06
Zfp143
Pattern NameModiscoSignificance
metacluster_1/pattern_131.69278e-20
Pattern NameHomerSignificance
motif5.motif1.01215e-08
Etv6
Pattern NameModiscoSignificance
metacluster_1/pattern_80.0375327
Pattern NameHomerSignificance
motif14.motif0.029235200000000003
Klf12
Pattern NameModiscoSignificance
metacluster_1/pattern_20.0387535
Pattern NameHomerSignificance
motif1.motif0.045002600000000004
Fos
Pattern NameModiscoSignificance
metacluster_1/pattern_72.8681100000000002e-05
Pattern NameHomerSignificance
motif3.motif9.408040000000001e-05
Etv4
Pattern NameModiscoSignificance
metacluster_1/pattern_80.00770439
Pattern NameHomerSignificance
motif14.motif0.019709
Rfx3
Pattern NameModiscoSignificance
metacluster_1/pattern_40.015502200000000002
Pattern NameHomerSignificance
motif4.motif0.028869099999999998
Egr1
Pattern NameModiscoSignificance
metacluster_1/pattern_00.046994
metacluster_1/pattern_20.014544999999999999
Pattern NameHomerSignificance
motif1.motif0.018728
Klf1
Pattern NameModiscoSignificance
metacluster_1/pattern_00.0171852
metacluster_1/pattern_20.000621542
Pattern NameHomerSignificance
motif1.motif0.0544981
Sp4
Pattern NameModiscoSignificance
metacluster_1/pattern_00.0377099
metacluster_1/pattern_20.0226059
Pattern NameHomerSignificance
motif1.motif0.0418735
Nfe2l2
Pattern NameModiscoSignificance
metacluster_1/pattern_70.0134963
Pattern NameHomerSignificance
motif3.motif0.0329847
Creb1
Pattern NameModiscoSignificance
metacluster_1/pattern_90.000257764
metacluster_1/pattern_120.0420561
Pattern NameHomerSignificance
motif10.motif0.052509900000000005
Klf4
Pattern NameModiscoSignificance
metacluster_1/pattern_20.0387535
Pattern NameHomerSignificance
motif1.motif0.037944599999999995
Fosl2
Pattern NameModiscoSignificance
metacluster_1/pattern_74.50971e-05
metacluster_1/pattern_90.050850099999999995
Pattern NameHomerSignificance
motif3.motif0.000607759
Batf
Pattern NameModiscoSignificance
metacluster_1/pattern_70.0107691
Pattern NameHomerSignificance
motif3.motif0.000125079
Jund
Pattern NameModiscoSignificance
metacluster_1/pattern_70.00235174
metacluster_1/pattern_90.0447103
Pattern NameHomerSignificance
motif3.motif0.0292976
Nfil3
Pattern NameModiscoSignificance
metacluster_1/pattern_90.00663753
metacluster_1/pattern_140.0238019
Pattern NameHomerSignificance
motif18.motif0.0153186
E2f1
Pattern NameModiscoSignificance
metacluster_1/pattern_20.0417086
Pattern NameHomerSignificance
motif1.motif0.0336495
E2f4
Pattern NameModiscoSignificance
metacluster_1/pattern_20.0454536
Pattern NameHomerSignificance
motif1.motif0.0336495
Dbp
Pattern NameModiscoSignificance
metacluster_1/pattern_90.028451900000000002
metacluster_1/pattern_120.0463864
metacluster_1/pattern_140.041240399999999997
metacluster_1/pattern_210.059602999999999996
Pattern NameHomerSignificance
motif18.motif0.0507981
Atf3
Pattern NameModiscoSignificance
metacluster_1/pattern_74.6909399999999995e-05
metacluster_1/pattern_90.0447103
Pattern NameHomerSignificance
motif3.motif0.000146623
Thap11
Pattern NameModiscoSignificance
metacluster_1/pattern_138.166e-20
Pattern NameHomerSignificance
motif5.motif1.74872e-07
Hlf
Pattern NameModiscoSignificance
metacluster_1/pattern_90.033556300000000004
metacluster_1/pattern_120.029179700000000003
Pattern NameHomerSignificance
motif18.motif0.0507981
Elk4
Pattern NameModiscoSignificance
metacluster_1/pattern_20.0269983
metacluster_1/pattern_80.00255979
Pattern NameHomerSignificance
motif14.motif0.0237793
Rfx1
Pattern NameModiscoSignificance
metacluster_1/pattern_20.046687900000000004
metacluster_1/pattern_44.94498e-06
metacluster_1/pattern_110.00685693
Pattern NameHomerSignificance
motif4.motif9.78954e-06
Mafk
Pattern NameModiscoSignificance
metacluster_1/pattern_70.05909059999999999
Pattern NameHomerSignificance
motif3.motif0.0427593
Elk1
Pattern NameModiscoSignificance
metacluster_1/pattern_80.0018893
Pattern NameHomerSignificance
motif14.motif0.017652099999999997
Elf2
Pattern NameModiscoSignificance
metacluster_1/pattern_80.0190162
Pattern NameHomerSignificance
motif14.motif0.019709
Fosl1
Pattern NameModiscoSignificance
metacluster_1/pattern_70.03505080000000001
metacluster_1/pattern_90.028451900000000002
Pattern NameHomerSignificance
motif3.motif0.000125079
Mef2d
Pattern NameModiscoSignificance
metacluster_1/pattern_69.439e-11
Pattern NameHomerSignificance
motif6.motif3.05681e-11
Gabpa
Pattern NameModiscoSignificance
metacluster_1/pattern_80.00244474
Pattern NameHomerSignificance
motif14.motif0.017652099999999997
Mafa
Pattern NameModiscoSignificance
metacluster_1/pattern_70.034148000000000005
Pattern NameHomerSignificance
motif3.motif0.0329847
Zfp281
Pattern NameModiscoSignificance
metacluster_1/pattern_00.025892900000000003
metacluster_1/pattern_20.0170329
Pattern NameHomerSignificance
motif1.motif0.0418735
Jdp2
Pattern NameModiscoSignificance
metacluster_1/pattern_72.75593e-05
metacluster_1/pattern_90.000819367
metacluster_1/pattern_120.0543387
Pattern NameHomerSignificance
motif3.motif0.000607759
Ctcf
Pattern NameModiscoSignificance
metacluster_1/pattern_14.60404e-10
metacluster_1/pattern_20.058438
Pattern NameHomerSignificance
motif2.motif2.3166e-07
Zbtb33
Pattern NameModiscoSignificance
metacluster_1/pattern_192.1293600000000002e-05
Pattern NameHomerSignificance
motif19.motif0.00123523
Zfp740
Pattern NameModiscoSignificance
metacluster_1/pattern_00.0497985
Pattern NameHomerSignificance
motif1.motif0.045002600000000004
Elf1
Pattern NameModiscoSignificance
metacluster_1/pattern_84.15401e-05
Pattern NameHomerSignificance
motif14.motif0.00591968
Maz
Pattern NameModiscoSignificance
metacluster_1/pattern_20.00136323
metacluster_1/pattern_110.0327116
Pattern NameHomerSignificance
motif1.motif0.040075400000000004
Zbtb17
Pattern NameModiscoSignificance
metacluster_1/pattern_00.00186088
metacluster_1/pattern_20.000225885
metacluster_1/pattern_110.00710452
Pattern NameHomerSignificance
motif1.motif0.0460207
Mef2a
Pattern NameModiscoSignificance
metacluster_1/pattern_63.5868699999999995e-06
Pattern NameHomerSignificance
motif6.motif2.22855e-06
Ctcfl
Pattern NameModiscoSignificance
metacluster_1/pattern_15.62115e-11
metacluster_1/pattern_20.00884311
Pattern NameHomerSignificance
motif2.motif2.13614e-05
Elf4
Pattern NameModiscoSignificance
metacluster_1/pattern_80.011471799999999999
Pattern NameHomerSignificance
motif14.motif0.021846
Nfyb
Pattern NameModiscoSignificance
metacluster_1/pattern_57.950420000000001e-13
Pattern NameHomerSignificance
motif11.motif9.38312e-08
Jun
Pattern NameModiscoSignificance
metacluster_1/pattern_70.0240715
metacluster_1/pattern_90.023238400000000003
Pattern NameHomerSignificance
motif3.motif0.000125079
Elf5
Pattern NameModiscoSignificance
metacluster_1/pattern_80.056791499999999995
Pattern NameHomerSignificance
motif14.motif0.0159288
XP_911724.4
Pattern NameModiscoSignificance
metacluster_1/pattern_80.00624663
Pattern NameHomerSignificance
motif14.motif0.033962
Klf8
Pattern NameModiscoSignificance
metacluster_1/pattern_20.0417086
Pattern NameHomerSignificance
motif1.motif0.037944599999999995
Rfx4
Pattern NameModiscoSignificance
metacluster_1/pattern_44.7379399999999996e-05
Pattern NameHomerSignificance
motif4.motif0.000118643
Junb
Pattern NameModiscoSignificance
metacluster_1/pattern_70.014956299999999999
metacluster_1/pattern_90.0437612
Pattern NameHomerSignificance
motif3.motif0.0487148
Meis1
Pattern NameModiscoSignificance
metacluster_1/pattern_150.022897900000000002
Pattern NameHomerSignificance
motif8.motif0.0494985
Rfx2
Pattern NameModiscoSignificance
metacluster_1/pattern_40.0582045
Pattern NameHomerSignificance
motif4.motif1.4257900000000001e-06
Pbx3
Pattern NameModiscoSignificance
metacluster_1/pattern_53.0361400000000003e-06
Pattern NameHomerSignificance
motif11.motif0.00028879299999999997
Pknox1
Pattern NameModiscoSignificance
metacluster_1/pattern_150.032563
Pattern NameHomerSignificance
motif8.motif0.043868199999999996
Nrf1
Pattern NameModiscoSignificance
metacluster_1/pattern_32.6342599999999998e-08
Pattern NameHomerSignificance
motif7.motif1.25599e-05
Erg
Pattern NameModiscoSignificance
metacluster_1/pattern_80.00412859
Pattern NameHomerSignificance
motif14.motif0.0306675
Fev
Pattern NameModiscoSignificance
metacluster_1/pattern_20.0446604
metacluster_1/pattern_80.00108819
Pattern NameHomerSignificance
motif14.motif0.0159288
Etv5
Pattern NameModiscoSignificance
metacluster_1/pattern_80.001057
Pattern NameHomerSignificance
motif14.motif0.0121306
Etv3
Pattern NameModiscoSignificance
metacluster_1/pattern_80.00558885
Pattern NameHomerSignificance
motif14.motif0.0368642
Egr2
Pattern NameModiscoSignificance
metacluster_1/pattern_00.0143476
metacluster_1/pattern_20.029908299999999995
metacluster_1/pattern_110.0399022
Pattern NameHomerSignificance
motif1.motif0.00842896
Rfx7
Pattern NameModiscoSignificance
metacluster_1/pattern_40.00578354
Pattern NameHomerSignificance
motif4.motif0.0125935
Foxi1
Pattern NameModiscoSignificance
metacluster_1/pattern_51.10225e-05
Pattern NameHomerSignificance
motif11.motif4.6395200000000006e-05
Egr3
Pattern NameModiscoSignificance
metacluster_1/pattern_00.025705000000000002
Pattern NameHomerSignificance
motif1.motif0.039375400000000005
Klf5
Pattern NameModiscoSignificance
metacluster_1/pattern_20.00136323
Pattern NameHomerSignificance
motif1.motif0.0276314
Bach2
Pattern NameModiscoSignificance
metacluster_1/pattern_70.00712039
Pattern NameHomerSignificance
motif3.motif0.0145852
Fli1
Pattern NameModiscoSignificance
metacluster_1/pattern_20.00375233
metacluster_1/pattern_80.00412859
Pattern NameHomerSignificance
motif14.motif0.0299322
Tgif1
Pattern NameModiscoSignificance
metacluster_1/pattern_150.00462071
Pattern NameHomerSignificance
motif8.motif0.0494985
Pbx1
Pattern NameModiscoSignificance
metacluster_1/pattern_150.032563
Pattern NameHomerSignificance
motif8.motif0.00495795
Unique TF-MoDISco TFs: #87
TF NameModiscoHomer
Tgif2
Pattern NameModiscoSignificance
metacluster_1/pattern_150.0121798
Absent
Tfe3
Pattern NameModiscoSignificance
metacluster_1/pattern_120.00205374
Absent
Mlx
Pattern NameModiscoSignificance
metacluster_1/pattern_120.013828799999999999
Absent
Cebpd
Pattern NameModiscoSignificance
metacluster_1/pattern_210.05964169999999999
Absent
Creb3l2
Pattern NameModiscoSignificance
metacluster_1/pattern_120.0239253
Absent
Mycn
Pattern NameModiscoSignificance
metacluster_1/pattern_120.0113375
Absent
Spi1
Pattern NameModiscoSignificance
metacluster_1/pattern_80.0375327
Absent
Meis2
Pattern NameModiscoSignificance
metacluster_1/pattern_150.0338188
Absent
Arnt
Pattern NameModiscoSignificance
metacluster_1/pattern_120.028575299999999998
Absent
Nfia
Pattern NameModiscoSignificance
metacluster_1/pattern_100.000431762
Absent
Zfp42
Pattern NameModiscoSignificance
metacluster_1/pattern_110.00710452
Absent
Pou3f3
Pattern NameModiscoSignificance
metacluster_1/pattern_210.059602999999999996
Absent
Myc
Pattern NameModiscoSignificance
metacluster_1/pattern_120.0200214
Absent
Srebf2
Pattern NameModiscoSignificance
metacluster_1/pattern_120.00377041
Absent
Atf1
Pattern NameModiscoSignificance
metacluster_1/pattern_90.039081599999999994
metacluster_1/pattern_120.0166203
Absent
Sox4
Pattern NameModiscoSignificance
metacluster_1/pattern_160.032793699999999995
Absent
Atf4
Pattern NameModiscoSignificance
metacluster_1/pattern_210.059602999999999996
Absent
Etv2
Pattern NameModiscoSignificance
metacluster_1/pattern_80.00173418
Absent
Tcfl5
Pattern NameModiscoSignificance
metacluster_1/pattern_120.00576405
Absent
Sp5
Pattern NameModiscoSignificance
metacluster_1/pattern_00.0456179
metacluster_1/pattern_22.70529e-05
Absent
Pou3f1
Pattern NameModiscoSignificance
metacluster_1/pattern_245.01103e-06
Absent
Tbx20
Pattern NameModiscoSignificance
metacluster_1/pattern_150.032563
Absent
Usf2
Pattern NameModiscoSignificance
metacluster_1/pattern_20.00160278
metacluster_1/pattern_110.055418499999999996
metacluster_1/pattern_120.00509316
metacluster_1/pattern_190.00584084
Absent
Sox2
Pattern NameModiscoSignificance
metacluster_1/pattern_160.000322571
Absent
Srebf1
Pattern NameModiscoSignificance
metacluster_1/pattern_120.0244427
Absent
Mlxip
Pattern NameModiscoSignificance
metacluster_1/pattern_120.042329000000000006
Absent
Tal1
Pattern NameModiscoSignificance
metacluster_1/pattern_180.023438499999999998
Absent
Gmeb2
Pattern NameModiscoSignificance
metacluster_1/pattern_90.033556300000000004
Absent
Creb5
Pattern NameModiscoSignificance
metacluster_1/pattern_99.60365e-05
Absent
Tef
Pattern NameModiscoSignificance
metacluster_1/pattern_90.011171700000000001
Absent
Mafb
Pattern NameModiscoSignificance
metacluster_1/pattern_90.00483039
Absent
Nr1h4
Pattern NameModiscoSignificance
metacluster_1/pattern_20.047735900000000005
Absent
Sox6
Pattern NameModiscoSignificance
metacluster_1/pattern_160.0152393
Absent
Klf15
Pattern NameModiscoSignificance
metacluster_1/pattern_20.00106181
Absent
Tfec
Pattern NameModiscoSignificance
metacluster_1/pattern_120.00201951
Absent
Sp2
Pattern NameModiscoSignificance
metacluster_1/pattern_21.1985099999999998e-15
metacluster_1/pattern_117.39267e-05
metacluster_1/pattern_180.0372218
metacluster_1/pattern_190.00245433
Absent
Yy1
Pattern NameModiscoSignificance
metacluster_1/pattern_114.61982e-06
Absent
Tfap2b
Pattern NameModiscoSignificance
metacluster_1/pattern_20.040800199999999995
Absent
Ddit3
Pattern NameModiscoSignificance
metacluster_1/pattern_210.059602999999999996
Absent
Pou5f1
Pattern NameModiscoSignificance
metacluster_1/pattern_170.0233597
Absent
Klf6
Pattern NameModiscoSignificance
metacluster_1/pattern_00.0171852
metacluster_1/pattern_22.60669e-05
Absent
Xbp1
Pattern NameModiscoSignificance
metacluster_1/pattern_120.0581924
Absent
Ptf1a
Pattern NameModiscoSignificance
metacluster_1/pattern_20.05747000000000001
Absent
Zfx
Pattern NameModiscoSignificance
metacluster_1/pattern_20.00395486
metacluster_1/pattern_110.00186142
metacluster_1/pattern_180.023438499999999998
metacluster_1/pattern_190.00155993
metacluster_1/pattern_200.0113741
Absent
Klf3
Pattern NameModiscoSignificance
metacluster_1/pattern_21.95112e-08
metacluster_1/pattern_110.0383124
metacluster_1/pattern_190.00656487
Absent
Cebpe
Pattern NameModiscoSignificance
metacluster_1/pattern_210.059602999999999996
Absent
Rxrb
Pattern NameModiscoSignificance
metacluster_1/pattern_90.0335328
Absent
Pou2f1
Pattern NameModiscoSignificance
metacluster_1/pattern_170.00272691
Absent
Nfib
Pattern NameModiscoSignificance
metacluster_1/pattern_102.43409e-07
Absent
Cebpa
Pattern NameModiscoSignificance
metacluster_1/pattern_90.050850099999999995
metacluster_1/pattern_210.059602999999999996
Absent
Sox10
Pattern NameModiscoSignificance
metacluster_1/pattern_160.000244648
Absent
Bhlhe41
Pattern NameModiscoSignificance
metacluster_1/pattern_120.0159861
Absent
Sox17
Pattern NameModiscoSignificance
metacluster_1/pattern_160.032793699999999995
Absent
Mxi1
Pattern NameModiscoSignificance
metacluster_1/pattern_20.0114642
metacluster_1/pattern_110.0327116
Absent
Atf2
Pattern NameModiscoSignificance
metacluster_1/pattern_90.000636828
metacluster_1/pattern_120.0537632
Absent
Bach1
Pattern NameModiscoSignificance
metacluster_1/pattern_70.0107691
Absent
Taf1
Pattern NameModiscoSignificance
metacluster_1/pattern_114.21953e-06
Absent
Max
Pattern NameModiscoSignificance
metacluster_1/pattern_120.01063
Absent
Nfic
Pattern NameModiscoSignificance
metacluster_1/pattern_100.00521317
Absent
Arntl
Pattern NameModiscoSignificance
metacluster_1/pattern_120.00621155
Absent
Meis3
Pattern NameModiscoSignificance
metacluster_1/pattern_150.033694
Absent
Nhlh1
Pattern NameModiscoSignificance
metacluster_1/pattern_20.0573702
Absent
Sox3
Pattern NameModiscoSignificance
metacluster_1/pattern_160.00794456
Absent
Tfeb
Pattern NameModiscoSignificance
metacluster_1/pattern_120.000498712
Absent
Atf7
Pattern NameModiscoSignificance
metacluster_1/pattern_90.00015526
metacluster_1/pattern_120.0230801
Absent
Gli3
Pattern NameModiscoSignificance
metacluster_1/pattern_00.0497985
Absent
Mbd2
Pattern NameModiscoSignificance
metacluster_1/pattern_20.0293629
Absent
Pou2f2
Pattern NameModiscoSignificance
metacluster_1/pattern_170.00129243
metacluster_1/pattern_242.4924499999999998e-05
Absent
Pknox2
Pattern NameModiscoSignificance
metacluster_1/pattern_150.032563
Absent
Clock
Pattern NameModiscoSignificance
metacluster_1/pattern_120.0244427
Absent
Klf7
Pattern NameModiscoSignificance
metacluster_1/pattern_20.0160086
Absent
Sp3
Pattern NameModiscoSignificance
metacluster_1/pattern_22.10847e-10
metacluster_1/pattern_110.00144104
metacluster_1/pattern_190.00224432
Absent
Cebpb
Pattern NameModiscoSignificance
metacluster_1/pattern_90.049022699999999995
metacluster_1/pattern_210.059602999999999996
Absent
Mitf
Pattern NameModiscoSignificance
metacluster_1/pattern_120.00112515
Absent
Pou3f2
Pattern NameModiscoSignificance
metacluster_1/pattern_245.01103e-06
Absent
Bhlhe40
Pattern NameModiscoSignificance
metacluster_1/pattern_120.00711671
Absent
Elf3
Pattern NameModiscoSignificance
metacluster_1/pattern_80.030642400000000004
Absent
Usf1
Pattern NameModiscoSignificance
metacluster_1/pattern_120.00442295
Absent
Wt1
Pattern NameModiscoSignificance
metacluster_1/pattern_21.3046099999999999e-05
metacluster_1/pattern_110.0219959
Absent
Gmeb1
Pattern NameModiscoSignificance
metacluster_1/pattern_90.052341399999999996
Absent
Snai1
Pattern NameModiscoSignificance
metacluster_1/pattern_150.0121798
Absent
Cebpg
Pattern NameModiscoSignificance
metacluster_1/pattern_210.059602999999999996
Absent
Crem
Pattern NameModiscoSignificance
metacluster_1/pattern_90.00112255
Absent
E2f3
Pattern NameModiscoSignificance
metacluster_1/pattern_20.0417086
Absent
Spdef
Pattern NameModiscoSignificance
metacluster_1/pattern_80.0228929
Absent
Npas2
Pattern NameModiscoSignificance
metacluster_1/pattern_120.00345182
Absent
Sox9
Pattern NameModiscoSignificance
metacluster_1/pattern_169.69368e-17
Absent
Unique Homer TFs: #1
TF NameModiscoHomer
Sall4Absent
Pattern NameHomerSignificance
motif1.motif0.00429661