Homer de novo Motif Results (/srv/scratch/imk1/TFBindingPredictionProject/MouseMutantData/indivRep_allPeaks-pr1.IDR0.05.ZF1vsWT.HomerResults//)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
If Homer is having trouble matching a motif to a known motif, try copy/pasting the matrix file into STAMP
More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 25502
Total background sequences = 75909
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 1e-489-1.126e+0333.72%18.94%106.5bp (127.7bp)CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer(0.735)
More Information | Similar Motifs Found		motif file (matrix)
2 1e-209-4.815e+0231.17%21.44%110.7bp (120.2bp)BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer(0.831)
More Information | Similar Motifs Found		motif file (matrix)
3 1e-166-3.832e+023.40%0.80%116.5bp (140.6bp)brk/dmmpmm(Bigfoot)/fly(0.681)
More Information | Similar Motifs Found		motif file (matrix)
4 1e-101-2.334e+021.60%0.27%137.3bp (138.4bp)Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer(0.613)
More Information | Similar Motifs Found		motif file (matrix)
5 1e-53-1.235e+0216.72%12.79%140.9bp (132.9bp)BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer(0.737)
More Information | Similar Motifs Found		motif file (matrix)
6 1e-29-6.759e+018.23%6.14%148.5bp (131.3bp)SeqBias: CG-repeat(0.737)
More Information | Similar Motifs Found		motif file (matrix)
7 1e-28-6.571e+0129.43%25.82%141.0bp (157.8bp)Trl(Zf)/S2-GAGAfactor-ChIP-Seq(GSE40646)/Homer(0.761)
More Information | Similar Motifs Found		motif file (matrix)
8 1e-27-6.299e+0128.86%25.35%146.0bp (130.3bp)RDS1/MA0361.1/Jaspar(0.871)
More Information | Similar Motifs Found		motif file (matrix)
9 1e-22-5.200e+010.86%0.34%138.6bp (149.5bp)PB0118.1_Esrra_2/Jaspar(0.758)
More Information | Similar Motifs Found		motif file (matrix)
10 1e-22-5.100e+016.37%4.77%137.6bp (154.1bp)ACE2/ACE2_YPD/2-SWI5(Harbison)/Yeast(0.666)
More Information | Similar Motifs Found		motif file (matrix)
11 1e-20-4.697e+019.97%8.04%151.6bp (135.1bp)IME1/MA0320.1/Jaspar(0.807)
More Information | Similar Motifs Found		motif file (matrix)
12 1e-19-4.377e+014.29%3.08%139.2bp (155.7bp)Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer(0.695)
More Information | Similar Motifs Found		motif file (matrix)
13 1e-18-4.371e+011.21%0.61%141.6bp (165.5bp)vvl/dmmpmm(Bigfoot)/fly(0.686)
More Information | Similar Motifs Found		motif file (matrix)
14 1e-18-4.280e+010.33%0.07%119.7bp (163.1bp)Sox11/MA0869.1/Jaspar(0.737)
More Information | Similar Motifs Found		motif file (matrix)
15 1e-18-4.256e+0127.20%24.39%138.5bp (158.3bp)Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer(0.776)
More Information | Similar Motifs Found		motif file (matrix)
16 1e-17-4.029e+011.48%0.83%141.5bp (165.9bp)SFL1(MacIsaac)/Yeast(0.732)
More Information | Similar Motifs Found		motif file (matrix)
17 1e-16-3.795e+011.13%0.59%140.1bp (159.0bp)che-1/MA0260.1/Jaspar(0.656)
More Information | Similar Motifs Found		motif file (matrix)
18 1e-15-3.600e+012.10%1.35%137.6bp (170.1bp)PB0091.1_Zbtb3_1/Jaspar(0.674)
More Information | Similar Motifs Found		motif file (matrix)
19 1e-13-3.140e+010.94%0.49%145.6bp (135.3bp)Hes1/MA1099.1/Jaspar(0.693)
More Information | Similar Motifs Found		motif file (matrix)
20 1e-13-3.085e+0127.71%25.33%147.0bp (142.7bp)SWI6(MacIsaac)/Yeast(0.701)
More Information | Similar Motifs Found		motif file (matrix)
21 1e-13-3.084e+011.28%0.75%145.1bp (147.9bp)Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer(0.693)
More Information | Similar Motifs Found		motif file (matrix)
22 1e-13-3.035e+0125.45%23.15%139.6bp (159.7bp)Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer(0.735)
More Information | Similar Motifs Found		motif file (matrix)
23 1e-12-2.857e+011.64%1.05%146.0bp (160.0bp)PH0037.1_Hdx/Jaspar(0.810)
More Information | Similar Motifs Found		motif file (matrix)
24 *1e-11-2.641e+014.94%3.93%140.8bp (159.8bp)PH0017.1_Cux1_2/Jaspar(0.708)
More Information | Similar Motifs Found		motif file (matrix)
25 *1e-10-2.308e+018.28%7.06%141.5bp (158.6bp)ESRRB/MA0141.3/Jaspar(0.710)
More Information | Similar Motifs Found		motif file (matrix)
26 *1e-8-1.963e+016.39%5.41%141.3bp (167.5bp)RFX1/MA0365.1/Jaspar(0.715)
More Information | Similar Motifs Found		motif file (matrix)
27 *1e-7-1.724e+010.07%0.00%131.0bp (210.8bp)slbo/dmmpmm(Pollard)/fly(0.666)
More Information | Similar Motifs Found		motif file (matrix)
28 *1e-7-1.677e+011.37%0.96%138.0bp (170.9bp)Vis/dmmpmm(Noyes_hd)/fly(0.816)
More Information | Similar Motifs Found		motif file (matrix)
29 *1e-6-1.549e+010.09%0.02%131.3bp (150.7bp)che-1/MA0260.1/Jaspar(0.601)
More Information | Similar Motifs Found		motif file (matrix)
30 *1e-6-1.464e+010.07%0.01%108.7bp (72.6bp)MAFK/MA0496.1/Jaspar(0.655)
More Information | Similar Motifs Found		motif file (matrix)
31 *1e-3-8.336e+006.48%5.87%135.9bp (160.3bp)MAFG::NFE2L1/MA0089.1/Jaspar(0.774)
More Information | Similar Motifs Found		motif file (matrix)
32 *1e-2-4.797e+001.44%1.24%128.6bp (164.1bp)vvl/dmmpmm(Down)/fly(0.766)
More Information | Similar Motifs Found		motif file (matrix)