Information for 20-TGATTTCATA (Motif 23)


Reverse Opposite:

p-value:1e-12
log p-value:-2.857e+01
Information Content per bp:1.813
Number of Target Sequences with motif418.0
Percentage of Target Sequences with motif1.64%
Number of Background Sequences with motif799.8
Percentage of Background Sequences with motif1.05%
Average Position of motif in Targets220.9 +/- 146.0bp
Average Position of motif in Background219.7 +/- 160.0bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0037.1_Hdx/Jaspar

Match Rank:1
Score:0.81
Offset:-5
Orientation:reverse strand
Alignment:-----TGATTTCATA--
TNNNATGATTTCNNCNN

SPT23/SPT23_YPD/[](Harbison)/Yeast

Match Rank:2
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-TGATTTCATA
TTGATTTC---

SPT23(MacIsaac)/Yeast

Match Rank:3
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-TGATTTCATA
TTGATTTC---

SPT23/MA0388.1/Jaspar

Match Rank:4
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-TGATTTCATA
TTGATTTC---

onecut/MA0235.1/Jaspar

Match Rank:5
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-TGATTTCATA
TTGATTT----

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:TGATTTCATA
TGGTTTCAGT

slbo/dmmpmm(Bigfoot)/fly

Match Rank:7
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:TGATTTCATA
TGATGGCAAA

Gfi1/MA0038.1/Jaspar

Match Rank:8
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---TGATTTCATA
CNGTGATTTN---

JUND(var.2)/MA0492.1/Jaspar

Match Rank:9
Score:0.69
Offset:-5
Orientation:forward strand
Alignment:-----TGATTTCATA
AAAGATGATGTCATC

onecut/dmmpmm(Noyes_hd)/fly

Match Rank:10
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---TGATTTCATA
NNTTGATTTG---