Information for 5-CGGSCGCY (Motif 8)


Reverse Opposite:

p-value:1e-27
log p-value:-6.299e+01
Information Content per bp:1.785
Number of Target Sequences with motif7360.0
Percentage of Target Sequences with motif28.86%
Number of Background Sequences with motif19245.6
Percentage of Background Sequences with motif25.35%
Average Position of motif in Targets234.4 +/- 146.0bp
Average Position of motif in Background218.0 +/- 130.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.60
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

RDS1/MA0361.1/Jaspar

Match Rank:1
Score:0.87
Offset:0
Orientation:forward strand
Alignment:CGGSCGCY
CGGCCGA-

RDS1(MacIsaac)/Yeast

Match Rank:2
Score:0.84
Offset:0
Orientation:forward strand
Alignment:CGGSCGCY
CGGCCG--

RDS1/RDS1_H2O2Hi/[](Harbison)/Yeast

Match Rank:3
Score:0.79
Offset:-1
Orientation:reverse strand
Alignment:-CGGSCGCY
TCGGCCGA-

ERF098/MA0999.1/Jaspar

Match Rank:4
Score:0.78
Offset:0
Orientation:forward strand
Alignment:CGGSCGCY
CCGCCGCC

YLL054C/MA0429.1/Jaspar

Match Rank:5
Score:0.77
Offset:-1
Orientation:reverse strand
Alignment:-CGGSCGCY
TCGGCCG--

ERF13/MA1004.1/Jaspar

Match Rank:6
Score:0.76
Offset:1
Orientation:forward strand
Alignment:CGGSCGCY-
-CGCCGCCA

ERF4/MA0992.1/Jaspar

Match Rank:7
Score:0.76
Offset:0
Orientation:forward strand
Alignment:CGGSCGCY
CCGCCGCC

CRF2/MA0975.1/Jaspar

Match Rank:8
Score:0.75
Offset:0
Orientation:forward strand
Alignment:CGGSCGCY
CCGCCGCC

ERF094/MA1049.1/Jaspar

Match Rank:9
Score:0.75
Offset:1
Orientation:forward strand
Alignment:CGGSCGCY-
-CGCCGCCG

ERF096/MA0998.1/Jaspar

Match Rank:10
Score:0.74
Offset:0
Orientation:forward strand
Alignment:CGGSCGCY--
CCGCCGCCAT