Information for 25-GATGAAAA (Motif 32)


Reverse Opposite:

p-value:1e-2
log p-value:-4.797e+00
Information Content per bp:1.530
Number of Target Sequences with motif368.0
Percentage of Target Sequences with motif1.44%
Number of Background Sequences with motif943.9
Percentage of Background Sequences with motif1.24%
Average Position of motif in Targets218.1 +/- 128.6bp
Average Position of motif in Background233.1 +/- 164.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

vvl/dmmpmm(Down)/fly

Match Rank:1
Score:0.77
Offset:0
Orientation:reverse strand
Alignment:GATGAAAA
TATTAAAA

RLR1/RLR1_YPD/[](Harbison)/Yeast

Match Rank:2
Score:0.75
Offset:-3
Orientation:reverse strand
Alignment:---GATGAAAA-
AAAGAAGAAAAT

skn-1/MA0547.1/Jaspar

Match Rank:3
Score:0.74
Offset:-5
Orientation:forward strand
Alignment:-----GATGAAAA--
AAAATGATGACAATT

Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:4
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--GATGAAAA
ATGATGCAAT

pan/dmmpmm(Pollard)/fly

Match Rank:5
Score:0.70
Offset:0
Orientation:forward strand
Alignment:GATGAAAA
GATCAAAG

Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer

Match Rank:6
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--GATGAAAA
MTGATGCAAT

Arid3a/MA0151.1/Jaspar

Match Rank:7
Score:0.70
Offset:1
Orientation:forward strand
Alignment:GATGAAAA
-ATTAAA-

NFAT5/MA0606.1/Jaspar

Match Rank:8
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:GATGAAAA--
NATGGAAAAN

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:9
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:GATGAAAA--
AATGGAAAAT

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:10
Score:0.68
Offset:0
Orientation:forward strand
Alignment:GATGAAAA----
TATGCWAATBAV