Information for 14-GAAGCATCAA (Motif 16)


Reverse Opposite:

p-value:1e-17
log p-value:-4.029e+01
Information Content per bp:1.829
Number of Target Sequences with motif378.0
Percentage of Target Sequences with motif1.48%
Number of Background Sequences with motif633.0
Percentage of Background Sequences with motif0.83%
Average Position of motif in Targets215.1 +/- 141.5bp
Average Position of motif in Background219.3 +/- 165.9bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

SFL1(MacIsaac)/Yeast

Match Rank:1
Score:0.73
Offset:0
Orientation:forward strand
Alignment:GAAGCATCAA
GAAGCTTC--

YAP5(MacIsaac)/Yeast

Match Rank:2
Score:0.71
Offset:1
Orientation:forward strand
Alignment:GAAGCATCAA
-AAGCAT---

YAP5/MA0417.1/Jaspar

Match Rank:3
Score:0.70
Offset:1
Orientation:forward strand
Alignment:GAAGCATCAA
-AAGCAT---

POL008.1_DCE_S_I/Jaspar

Match Rank:4
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-GAAGCATCAA
NGAAGC-----

PH0134.1_Pbx1/Jaspar

Match Rank:5
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-GAAGCATCAA------
TCACCCATCAATAAACA

GCR2(MacIsaac)/Yeast

Match Rank:6
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--GAAGCATCAA
NGGAAGC-----

PB0144.1_Lef1_2/Jaspar

Match Rank:7
Score:0.62
Offset:1
Orientation:forward strand
Alignment:GAAGCATCAA-------
-GAAGATCAATCACTTA

GCR2/MA0305.1/Jaspar

Match Rank:8
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--GAAGCATCAA
NGGAAGC-----

pan/dmmpmm(Bigfoot)/fly

Match Rank:9
Score:0.62
Offset:5
Orientation:forward strand
Alignment:GAAGCATCAA-
-----ATCAAA

SIG1/SIG1_H2O2Hi/[](Harbison)/Yeast

Match Rank:10
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GAAGCATCAA
AGGAAACAACAA