Information for 10-TGCTGCTCAG (Motif 10)


Reverse Opposite:

p-value:1e-22
log p-value:-5.100e+01
Information Content per bp:1.835
Number of Target Sequences with motif1625.0
Percentage of Target Sequences with motif6.37%
Number of Background Sequences with motif3619.9
Percentage of Background Sequences with motif4.77%
Average Position of motif in Targets207.9 +/- 137.6bp
Average Position of motif in Background219.9 +/- 154.1bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

ACE2/ACE2_YPD/2-SWI5(Harbison)/Yeast

Match Rank:1
Score:0.67
Offset:0
Orientation:forward strand
Alignment:TGCTGCTCAG
TGCTGGT---

SWI5(MacIsaac)/Yeast

Match Rank:2
Score:0.63
Offset:0
Orientation:forward strand
Alignment:TGCTGCTCAG
TGCTGGTT--

SWI5/MA0402.1/Jaspar

Match Rank:3
Score:0.63
Offset:0
Orientation:forward strand
Alignment:TGCTGCTCAG
TGCTGGTT--

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:TGCTGCTCAG---
---TGCCCAGNHW

ACE2/MA0267.1/Jaspar

Match Rank:5
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TGCTGCTCAG
TGCTGGT---

grh/dmmpmm(Papatsenko)/fly

Match Rank:6
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-TGCTGCTCAG
TACCTGCT---

SWI5/Literature(Harbison)/Yeast

Match Rank:7
Score:0.60
Offset:0
Orientation:forward strand
Alignment:TGCTGCTCAG
GGCTGA----

STP1(MacIsaac)/Yeast

Match Rank:8
Score:0.60
Offset:0
Orientation:forward strand
Alignment:TGCTGCTCAG
TGCGGCGC--

STP1/MA0394.1/Jaspar

Match Rank:9
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TGCTGCTCAG
TGCGGCGC--

CDC5(MYB)/Arabidopsis thaliana/AthaMap

Match Rank:10
Score:0.58
Offset:3
Orientation:forward strand
Alignment:TGCTGCTCAG----
---GGCTCAGCGCG