Information for 17-AAGCAGAAGCCT (Motif 17)


Reverse Opposite:

p-value:1e-16
log p-value:-3.795e+01
Information Content per bp:1.689
Number of Target Sequences with motif288.0
Percentage of Target Sequences with motif1.13%
Number of Background Sequences with motif447.5
Percentage of Background Sequences with motif0.59%
Average Position of motif in Targets214.1 +/- 140.1bp
Average Position of motif in Background224.7 +/- 159.0bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

che-1/MA0260.1/Jaspar

Match Rank:1
Score:0.66
Offset:5
Orientation:forward strand
Alignment:AAGCAGAAGCCT
-----GAAACC-

MA0260.1_che-1/Jaspar

Match Rank:2
Score:0.66
Offset:5
Orientation:forward strand
Alignment:AAGCAGAAGCCT
-----GAAACC-

GCR1/Literature(Harbison)/Yeast

Match Rank:3
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:AAGCAGAAGCCT
--GAGGAAGCC-

POL008.1_DCE_S_I/Jaspar

Match Rank:4
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:AAGCAGAAGCCT
----NGAAGC--

Adf1/dmmpmm(Bergman)/fly

Match Rank:5
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--AAGCAGAAGCCT
NACAGAAGCAGC--

SFL1(MacIsaac)/Yeast

Match Rank:6
Score:0.58
Offset:5
Orientation:forward strand
Alignment:AAGCAGAAGCCT-
-----GAAGCTTC

odd/dmmpmm(Noyes)/fly

Match Rank:7
Score:0.57
Offset:1
Orientation:forward strand
Alignment:AAGCAGAAGCCT
-AACAGTAGCA-

Unknown4/Arabidopsis-Promoters/Homer

Match Rank:8
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-AAGCAGAAGCCT
RAAGAMGAMG---

SpiB(ETS)/OCILY3-SPIB-ChIP-Seq(GSE56857)/Homer

Match Rank:9
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-AAGCAGAAGCCT
AAAGRGGAAGTG-

SPI1/MA0080.4/Jaspar

Match Rank:10
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---AAGCAGAAGCCT
AAAAAGCGGAAGTA-