Information for 19-CSATRKYKAC (Motif 21)


Reverse Opposite:

p-value:1e-13
log p-value:-3.084e+01
Information Content per bp:1.510
Number of Target Sequences with motif326.0
Percentage of Target Sequences with motif1.28%
Number of Background Sequences with motif569.8
Percentage of Background Sequences with motif0.75%
Average Position of motif in Targets208.1 +/- 145.1bp
Average Position of motif in Background222.8 +/- 147.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:1
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---CSATRKYKAC-
TTGCCATGGCAACN

RFX4/MA0799.1/Jaspar

Match Rank:2
Score:0.69
Offset:-5
Orientation:forward strand
Alignment:-----CSATRKYKAC-
CGTTGCCATGGCAACG

RFX3/MA0798.1/Jaspar

Match Rank:3
Score:0.68
Offset:-5
Orientation:forward strand
Alignment:-----CSATRKYKAC-
CGTTGCCATGGCAACG

Rfx1/MA0509.1/Jaspar

Match Rank:4
Score:0.68
Offset:-4
Orientation:forward strand
Alignment:----CSATRKYKAC
GTTGCCATGGCAAC

RFX2/MA0600.2/Jaspar

Match Rank:5
Score:0.68
Offset:-5
Orientation:reverse strand
Alignment:-----CSATRKYKAC-
CGTTGCCATGGCAACG

X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:6
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---CSATRKYKAC-
TTGCCATGGCAACC

RFX1(MacIsaac)/Yeast

Match Rank:7
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----CSATRKYKAC
GTTGCCATGGCAAC

Rfx2(HTH)/LoVo-RFX2-ChIP-Seq(GSE49402)/Homer

Match Rank:8
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----CSATRKYKAC-
GTTGCCATGGCAACM

RFX5/MA0510.2/Jaspar

Match Rank:9
Score:0.65
Offset:-5
Orientation:reverse strand
Alignment:-----CSATRKYKAC-
NGTTGCCATGGCAACG

RFX1/RFX1_YPD/[](Harbison)/Yeast

Match Rank:10
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---CSATRKYKAC
TTGCCATGGCAAC