Information for 23-AATGATCAGT (Motif 24)


Reverse Opposite:

p-value:1e-11
log p-value:-2.641e+01
Information Content per bp:1.659
Number of Target Sequences with motif1261.0
Percentage of Target Sequences with motif4.94%
Number of Background Sequences with motif2983.7
Percentage of Background Sequences with motif3.93%
Average Position of motif in Targets208.0 +/- 140.8bp
Average Position of motif in Background224.8 +/- 159.8bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0017.1_Cux1_2/Jaspar

Match Rank:1
Score:0.71
Offset:-4
Orientation:forward strand
Alignment:----AATGATCAGT-
TAATGATGATCACTA

slbo/dmmpmm(SeSiMCMC)/fly

Match Rank:2
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-AATGATCAGT
CAATAAACAG-

ap/dmmpmm(Bigfoot)/fly

Match Rank:3
Score:0.69
Offset:0
Orientation:forward strand
Alignment:AATGATCAGT
AATNAT----

GATA15/MA1016.1/Jaspar

Match Rank:4
Score:0.69
Offset:0
Orientation:forward strand
Alignment:AATGATCAGT
TATGATCAG-

HAT1/MA1024.1/Jaspar

Match Rank:5
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-AATGATCAGT
NAATGATTGN-

ELT-3(Gata)/cElegans-L1-ELT3-ChIP-Seq(modEncode)/Homer

Match Rank:6
Score:0.68
Offset:0
Orientation:forward strand
Alignment:AATGATCAGT
AWTGATAAGA

lab/dmmpmm(Noyes)/fly

Match Rank:7
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--AATGATCAGT
TTAATGANC---

ZmHOX2a(2)(HD-HOX)/Zea mays/AthaMap

Match Rank:8
Score:0.66
Offset:2
Orientation:forward strand
Alignment:AATGATCAGT
--TGATCTG-

ATHB-16/MA0951.1/Jaspar

Match Rank:9
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:AATGATCAGT
AATTATTA--

ATHB-15/MA1026.1/Jaspar

Match Rank:10
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:AATGATCAGT
AATNATTA--