Information for 1-CTRCTGCCMYCT (Motif 1)


Reverse Opposite:

p-value:1e-489
log p-value:-1.126e+03
Information Content per bp:1.690
Number of Target Sequences with motif8600.0
Percentage of Target Sequences with motif33.72%
Number of Background Sequences with motif14379.7
Percentage of Background Sequences with motif18.94%
Average Position of motif in Targets191.9 +/- 106.5bp
Average Position of motif in Background201.9 +/- 127.7bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:1
Score:0.74
Offset:0
Orientation:forward strand
Alignment:CTRCTGCCMYCT--------
ANAGTGCCACCTGGTGGCCA

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.72
Offset:-2
Orientation:forward strand
Alignment:--CTRCTGCCMYCT------
CNNBRGCGCCCCCTGSTGGC

CTCF/MA0139.1/Jaspar

Match Rank:3
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:CTRCTGCCMYCT--------
-TAGCGCCCCCTGGTGGCCA

THAP1/MA0597.1/Jaspar

Match Rank:4
Score:0.69
Offset:3
Orientation:forward strand
Alignment:CTRCTGCCMYCT
---CTGCCCGCA

Hic1/MA0739.1/Jaspar

Match Rank:5
Score:0.69
Offset:3
Orientation:forward strand
Alignment:CTRCTGCCMYCT
---ATGCCAACC

HIC2/MA0738.1/Jaspar

Match Rank:6
Score:0.68
Offset:3
Orientation:forward strand
Alignment:CTRCTGCCMYCT
---ATGCCCACC

PB0118.1_Esrra_2/Jaspar

Match Rank:7
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-CTRCTGCCMYCT----
NNNNTTGACCCCTNNNN

PB0076.1_Sp4_1/Jaspar

Match Rank:8
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-CTRCTGCCMYCT----
GGTCCCGCCCCCTTCTC

CTCF/MA0531.1/Jaspar

Match Rank:9
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:CTRCTGCCMYCT-----
--GGCGCCATCTAGCGG

INSM1/MA0155.1/Jaspar

Match Rank:10
Score:0.65
Offset:4
Orientation:reverse strand
Alignment:CTRCTGCCMYCT----
----CGCCCCCTGACA