Information for 8-CGCTCGCGCC (Motif 6)


Reverse Opposite:

p-value:1e-29
log p-value:-6.759e+01
Information Content per bp:1.501
Number of Target Sequences with motif2100.0
Percentage of Target Sequences with motif8.23%
Number of Background Sequences with motif4661.3
Percentage of Background Sequences with motif6.14%
Average Position of motif in Targets240.2 +/- 148.5bp
Average Position of motif in Background221.9 +/- 131.3bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.26
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

SeqBias: CG-repeat

Match Rank:1
Score:0.74
Offset:0
Orientation:forward strand
Alignment:CGCTCGCGCC
CGCGCGCGCG

PB0095.1_Zfp161_1/Jaspar

Match Rank:2
Score:0.67
Offset:-5
Orientation:reverse strand
Alignment:-----CGCTCGCGCC-
NCANGCGCGCGCGCCA

POL011.1_XCPE1/Jaspar

Match Rank:3
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:CGCTCGCGCC-
-GGTCCCGCCC

h/dmmpmm(Bergman)/fly

Match Rank:4
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--CGCTCGCGCC--
NNGGCACGCGCCAN

NRF1/MA0506.1/Jaspar

Match Rank:5
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-CGCTCGCGCC
GCGCCTGCGCA

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:6
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---CGCTCGCGCC
CTGCGCATGCGC-

RSC30/MA0375.1/Jaspar

Match Rank:7
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:CGCTCGCGCC
CGCGCGCG--

E2F4/MA0470.1/Jaspar

Match Rank:8
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CGCTCGCGCC-
NNTTCCCGCCC

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:CGCTCGCGCC-
-GCTCGGSCTC

EGR4/MA0733.1/Jaspar

Match Rank:10
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---CGCTCGCGCC---
TTACGCCCACGCATTT