Information for 14-ACTGAAATTATT (Motif 14)


Reverse Opposite:

p-value:1e-18
log p-value:-4.280e+01
Information Content per bp:1.623
Number of Target Sequences with motif83.0
Percentage of Target Sequences with motif0.33%
Number of Background Sequences with motif51.4
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets223.3 +/- 119.7bp
Average Position of motif in Background225.7 +/- 163.1bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox11/MA0869.1/Jaspar

Match Rank:1
Score:0.74
Offset:-3
Orientation:reverse strand
Alignment:---ACTGAAATTATT
AACACTGAAATTGTT

SOX4/MA0867.1/Jaspar

Match Rank:2
Score:0.71
Offset:-3
Orientation:reverse strand
Alignment:---ACTGAAATTATT-
AACACTGCAATTGTTC

MF0010.1_Homeobox_class/Jaspar

Match Rank:3
Score:0.68
Offset:5
Orientation:reverse strand
Alignment:ACTGAAATTATT
-----AATTATT

ATHB-16/MA0951.1/Jaspar

Match Rank:4
Score:0.66
Offset:5
Orientation:reverse strand
Alignment:ACTGAAATTATT-
-----AATTATTA

AHL12/MA0932.1/Jaspar

Match Rank:5
Score:0.65
Offset:4
Orientation:forward strand
Alignment:ACTGAAATTATT
----AATTAATT

ATHB-51/MA0952.1/Jaspar

Match Rank:6
Score:0.65
Offset:5
Orientation:forward strand
Alignment:ACTGAAATTATT-
-----AATTATTG

Initiator/Drosophila-Promoters/Homer

Match Rank:7
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--ACTGAAATTATT
CRACTGAN------

HAT5/MA0008.2/Jaspar

Match Rank:8
Score:0.64
Offset:2
Orientation:forward strand
Alignment:ACTGAAATTATT--
--TTCAATTATTGC

ATHB1(HD-ZIP)/Arabidopsis thaliana/AthaMap

Match Rank:9
Score:0.64
Offset:4
Orientation:forward strand
Alignment:ACTGAAATTATT-
----CAATTATTG

cad/dmmpmm(Down)/fly

Match Rank:10
Score:0.64
Offset:4
Orientation:reverse strand
Alignment:ACTGAAATTATT
----AAATTTTT