Information for 22-ATTACACACAGT (Motif 27)


Reverse Opposite:

p-value:1e-7
log p-value:-1.724e+01
Information Content per bp:1.949
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif0.07%
Number of Background Sequences with motif3.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets186.4 +/- 131.0bp
Average Position of motif in Background322.0 +/- 210.8bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.94
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

slbo/dmmpmm(Pollard)/fly

Match Rank:1
Score:0.67
Offset:0
Orientation:forward strand
Alignment:ATTACACACAGT
ATTGCAAA----

slbo/MA0244.1/Jaspar

Match Rank:2
Score:0.67
Offset:0
Orientation:forward strand
Alignment:ATTACACACAGT
ATTGCAAA----

HMRA2/MA0318.1/Jaspar

Match Rank:3
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:ATTACACACAGT
ATTACATG----

MATALPHA2/MA0328.2/Jaspar

Match Rank:4
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:ATTACACACAGT
ATTACACG----

PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer

Match Rank:5
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---ATTACACACAGT
NNAATTAGTCACGGT

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--ATTACACACAGT
SSAATCCACANN--

Cf2-II/dmmpmm(Pollard)/fly

Match Rank:7
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:ATTACACACAGT
-TTATACNC---

PB0187.1_Tcf7_2/Jaspar

Match Rank:8
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----ATTACACACAGT
CCGTATTATAAACAA-

FOXH1/MA0479.1/Jaspar

Match Rank:9
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---ATTACACACAGT
TCCAATCCACA----

ems/dmmpmm(Pollard)/fly

Match Rank:10
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--ATTACACACAGT
TAATGACA------