Information for 7-CCACNCGGBGGC (Motif 5)


Reverse Opposite:

p-value:1e-53
log p-value:-1.235e+02
Information Content per bp:1.649
Number of Target Sequences with motif4265.0
Percentage of Target Sequences with motif16.72%
Number of Background Sequences with motif9707.3
Percentage of Background Sequences with motif12.79%
Average Position of motif in Targets224.5 +/- 140.9bp
Average Position of motif in Background217.7 +/- 132.9bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.18
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-CCACNCGGBGGC-------
GCCASCAGGGGGCGCYVNNG

CTCF/MA0139.1/Jaspar

Match Rank:2
Score:0.71
Offset:-3
Orientation:forward strand
Alignment:---CCACNCGGBGGC----
TGGCCACCAGGGGGCGCTA

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:3
Score:0.71
Offset:-3
Orientation:reverse strand
Alignment:---CCACNCGGBGGC-----
TGGCCACCAGGTGGCACTNT

ERF094/MA1049.1/Jaspar

Match Rank:4
Score:0.65
Offset:5
Orientation:reverse strand
Alignment:CCACNCGGBGGC-
-----CGGCGGCG

PB0101.1_Zic1_1/Jaspar

Match Rank:5
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--CCACNCGGBGGC
CACCCCCGGGGGGG

CRZ1/MA0285.1/Jaspar

Match Rank:6
Score:0.63
Offset:7
Orientation:reverse strand
Alignment:CCACNCGGBGGC----
-------GTGGCTNNG

RPN4/MA0373.1/Jaspar

Match Rank:7
Score:0.62
Offset:6
Orientation:forward strand
Alignment:CCACNCGGBGGC-
------GGTGGCG

UME6(MacIsaac)/Yeast

Match Rank:8
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:CCACNCGGBGGC--
----TCGGCGGCTA

IME1(MacIsaac)/Yeast

Match Rank:9
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:CCACNCGGBGGC
---CTCGGCGG-

CRF2/MA0975.1/Jaspar

Match Rank:10
Score:0.62
Offset:6
Orientation:reverse strand
Alignment:CCACNCGGBGGC--
------GGCGGCGG