Information for 13-TRTTACCA (Motif 22)


Reverse Opposite:

p-value:1e-13
log p-value:-3.035e+01
Information Content per bp:1.688
Number of Target Sequences with motif6490.0
Percentage of Target Sequences with motif25.45%
Number of Background Sequences with motif17574.5
Percentage of Background Sequences with motif23.15%
Average Position of motif in Targets204.2 +/- 139.6bp
Average Position of motif in Background223.8 +/- 159.7bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.15
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:1
Score:0.73
Offset:-2
Orientation:reverse strand
Alignment:--TRTTACCA--
SCTGTCARCACC

PB0109.1_Bbx_2/Jaspar

Match Rank:2
Score:0.73
Offset:-5
Orientation:reverse strand
Alignment:-----TRTTACCA----
NNNNCTGTTAACNNTNN

FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer

Match Rank:3
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--TRTTACCA--
WWTRTAAACAVG

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:4
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--TRTTACCA--
CNTGTTTACATA

elt-3/MA0542.1/Jaspar

Match Rank:5
Score:0.66
Offset:0
Orientation:forward strand
Alignment:TRTTACCA
TCTTATCA

FOXB1/MA0845.1/Jaspar

Match Rank:6
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-TRTTACCA--
ATATTTACATA

CG11617/MA0173.1/Jaspar

Match Rank:7
Score:0.65
Offset:2
Orientation:forward strand
Alignment:TRTTACCA-
--TTAACAT

Foxj2/MA0614.1/Jaspar

Match Rank:8
Score:0.65
Offset:1
Orientation:forward strand
Alignment:TRTTACCA-
-GTAAACAA

fkh-2/MA0920.1/Jaspar

Match Rank:9
Score:0.65
Offset:1
Orientation:forward strand
Alignment:TRTTACCA-
-GTAAACAA

Caup/dmmpmm(Noyes_hd)/fly

Match Rank:10
Score:0.65
Offset:0
Orientation:forward strand
Alignment:TRTTACCA--
CAATAACAAA