Information for 23-GAGAAACCTRGG (Motif 29)


Reverse Opposite:

p-value:1e-6
log p-value:-1.549e+01
Information Content per bp:1.912
Number of Target Sequences with motif24.0
Percentage of Target Sequences with motif0.09%
Number of Background Sequences with motif12.5
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets176.6 +/- 131.3bp
Average Position of motif in Background205.3 +/- 150.7bp
Strand Bias (log2 ratio + to - strand density)2.2
Multiplicity (# of sites on avg that occur together)1.62
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

che-1/MA0260.1/Jaspar

Match Rank:1
Score:0.60
Offset:2
Orientation:forward strand
Alignment:GAGAAACCTRGG
--GAAACC----

MA0260.1_che-1/Jaspar

Match Rank:2
Score:0.60
Offset:2
Orientation:forward strand
Alignment:GAGAAACCTRGG
--GAAACC----

P0510F09.23/MA1030.1/Jaspar

Match Rank:3
Score:0.60
Offset:3
Orientation:forward strand
Alignment:GAGAAACCTRGG-
---AACCCTAGAT

PB0117.1_Eomes_2/Jaspar

Match Rank:4
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---GAGAAACCTRGG-
NNGGCGACACCTCNNN

dl-A/dmmpmm(Bergman)/fly

Match Rank:5
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--GAGAAACCTRGG
NGGAAAAACCC---

sna/MA0086.1/Jaspar

Match Rank:6
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:GAGAAACCTRGG
----CACCTG--

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:7
Score:0.56
Offset:2
Orientation:forward strand
Alignment:GAGAAACCTRGG
--NNCACCTGNN

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.56
Offset:4
Orientation:forward strand
Alignment:GAGAAACCTRGG--
----WDNCTGGGCA

ID4/MA0824.1/Jaspar

Match Rank:9
Score:0.56
Offset:2
Orientation:forward strand
Alignment:GAGAAACCTRGG
--TACACCTGTC

RAV1(2)(AP2/EREBP)/Arabidopsis thaliana/AthaMap

Match Rank:10
Score:0.56
Offset:2
Orientation:forward strand
Alignment:GAGAAACCTRGG--
--ATCACCTGAGGC