Information for 17-GACCATGA (Motif 25)


Reverse Opposite:

p-value:1e-10
log p-value:-2.308e+01
Information Content per bp:1.794
Number of Target Sequences with motif2112.0
Percentage of Target Sequences with motif8.28%
Number of Background Sequences with motif5359.7
Percentage of Background Sequences with motif7.06%
Average Position of motif in Targets209.4 +/- 141.5bp
Average Position of motif in Background221.2 +/- 158.6bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

ESRRB/MA0141.3/Jaspar

Match Rank:1
Score:0.71
Offset:-3
Orientation:reverse strand
Alignment:---GACCATGA
NATGACCTTGA

Esrra/MA0592.2/Jaspar

Match Rank:2
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--GACCATGA-
ATGACCTTGAA

Sox17/MA0078.1/Jaspar

Match Rank:3
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:GACCATGA-
GACAATGNN

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:4
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-GACCATGA-
TGACCTTGAN

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:5
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-GACCATGA-
TGACCTTGAV

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:6
Score:0.68
Offset:3
Orientation:forward strand
Alignment:GACCATGA-
---CATGAC

PB0014.1_Esrra_1/Jaspar

Match Rank:7
Score:0.67
Offset:-6
Orientation:reverse strand
Alignment:------GACCATGA---
NNNNATGACCTTGANTN

Nr5a2/MA0505.1/Jaspar

Match Rank:8
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---GACCATGA----
GCTGACCTTGAACTN

Esrrg/MA0643.1/Jaspar

Match Rank:9
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--GACCATGA
ATGACCTTGA

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--GACCATGA
NTGACCTTGA