Information for 8-AACAWWGC (Motif 15)


Reverse Opposite:

p-value:1e-18
log p-value:-4.256e+01
Information Content per bp:1.703
Number of Target Sequences with motif6937.0
Percentage of Target Sequences with motif27.20%
Number of Background Sequences with motif18516.9
Percentage of Background Sequences with motif24.39%
Average Position of motif in Targets205.2 +/- 138.5bp
Average Position of motif in Background224.3 +/- 158.3bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.18
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:1
Score:0.78
Offset:-2
Orientation:reverse strand
Alignment:--AACAWWGC
VRRACAAWGG

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:2
Score:0.77
Offset:-2
Orientation:reverse strand
Alignment:--AACAWWGC
GGAACAAAGR

PB0061.1_Sox11_1/Jaspar

Match Rank:3
Score:0.76
Offset:-5
Orientation:forward strand
Alignment:-----AACAWWGC----
ATAAGAACAAAGGACTA

PB0071.1_Sox4_1/Jaspar

Match Rank:4
Score:0.75
Offset:-5
Orientation:forward strand
Alignment:-----AACAWWGC----
AGAAGAACAAAGGACTA

SOX10/MA0442.1/Jaspar

Match Rank:5
Score:0.74
Offset:1
Orientation:reverse strand
Alignment:AACAWWGC
-ACAAAG-

Sox6/MA0515.1/Jaspar

Match Rank:6
Score:0.73
Offset:-2
Orientation:reverse strand
Alignment:--AACAWWGC
AAAACAATGG

ROX1/Literature(Harbison)/Yeast

Match Rank:7
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:AACAWWGC-
AACAATACA

MF0011.1_HMG_class/Jaspar

Match Rank:8
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:AACAWWGC
AACAAT--

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-AACAWWGC-
GAACAATGGN

Sox5/MA0087.1/Jaspar

Match Rank:10
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-AACAWWGC
NAACAAT--