Information for 21-TAGTGACA (Motif 28)


Reverse Opposite:

p-value:1e-7
log p-value:-1.677e+01
Information Content per bp:1.951
Number of Target Sequences with motif349.0
Percentage of Target Sequences with motif1.37%
Number of Background Sequences with motif729.4
Percentage of Background Sequences with motif0.96%
Average Position of motif in Targets208.1 +/- 138.0bp
Average Position of motif in Background225.7 +/- 170.9bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Vis/dmmpmm(Noyes_hd)/fly

Match Rank:1
Score:0.82
Offset:0
Orientation:forward strand
Alignment:TAGTGACA--
ANNTGACAGN

vis/MA0252.1/Jaspar

Match Rank:2
Score:0.81
Offset:3
Orientation:forward strand
Alignment:TAGTGACA-
---TGACAG

achi/MA0207.1/Jaspar

Match Rank:3
Score:0.79
Offset:3
Orientation:forward strand
Alignment:TAGTGACA-
---TGACAG

MEIS3/MA0775.1/Jaspar

Match Rank:4
Score:0.78
Offset:2
Orientation:forward strand
Alignment:TAGTGACA--
--TTGACAGG

Hth/dmmpmm(Noyes_hd)/fly

Match Rank:5
Score:0.78
Offset:0
Orientation:forward strand
Alignment:TAGTGACA--
CTNTGACAGN

hth/MA0227.1/Jaspar

Match Rank:6
Score:0.78
Offset:3
Orientation:forward strand
Alignment:TAGTGACA-
---TGACAG

MEIS1/MA0498.2/Jaspar

Match Rank:7
Score:0.78
Offset:2
Orientation:forward strand
Alignment:TAGTGACA-
--TTGACAG

unc-62/MA0918.1/Jaspar

Match Rank:8
Score:0.77
Offset:0
Orientation:reverse strand
Alignment:TAGTGACA----
NNNTGACAGCTN

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:9
Score:0.75
Offset:1
Orientation:reverse strand
Alignment:TAGTGACA---
-VBTGWCAGCB

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:10
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:TAGTGACA
ARNTGACA