Information for 4-GGCGCTAYTGAG (Motif 3)


Reverse Opposite:

p-value:1e-166
log p-value:-3.832e+02
Information Content per bp:1.704
Number of Target Sequences with motif866.0
Percentage of Target Sequences with motif3.40%
Number of Background Sequences with motif607.3
Percentage of Background Sequences with motif0.80%
Average Position of motif in Targets198.8 +/- 116.5bp
Average Position of motif in Background218.2 +/- 140.6bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

brk/dmmpmm(Bigfoot)/fly

Match Rank:1
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-GGCGCTAYTGAG
CGGCGCC------

brk/dmmpmm(Pollard)/fly

Match Rank:2
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--GGCGCTAYTGAG
CTGGCGCC------

brk/MA0213.1/Jaspar

Match Rank:3
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--GGCGCTAYTGAG
CTGGCGCC------

brk/dmmpmm(SeSiMCMC)/fly

Match Rank:4
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--GGCGCTAYTGAG
CCGGCGCC------

brk/dmmpmm(Papatsenko)/fly

Match Rank:5
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--GGCGCTAYTGAG
CTGGCGCC------

brk/dmmpmm(Bergman)/fly

Match Rank:6
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-GGCGCTAYTGAG
TGGCGCT------

brk/dmmpmm(Down)/fly

Match Rank:7
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--GGCGCTAYTGAG
CCGGCGCT------

SNT2/SNT2_YPD/[](Harbison)/Yeast

Match Rank:8
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GGCGCTAYTGAG
CGGCGCTACCA--

STP2/MA0395.1/Jaspar

Match Rank:9
Score:0.59
Offset:-9
Orientation:reverse strand
Alignment:---------GGCGCTAYTGAG
NNGNNGTGCGGCGCCGNTNN-

PB0112.1_E2F2_2/Jaspar

Match Rank:10
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----GGCGCTAYTGAG
CCTTCGGCGCCAAAAGG