Homer de novo Motif Results (/home/ubuntu/training_camp/workflow_notebooks/homer_output/)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
If Homer is having trouble matching a motif to a known motif, try copy/pasting the matrix file into STAMP
More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 1612
Total background sequences = 44632
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 1e-74-1.722e+0216.69%4.51%46.2bp (76.9bp)REB1/SacCer-Promoters/Homer(0.974)
More Information | Similar Motifs Found		motif file (matrix)
2 1e-37-8.546e+017.01%1.60%40.7bp (74.0bp)ABF1/ABF1_YPD/62-ABF1(Harbison)/Yeast(0.925)
More Information | Similar Motifs Found		motif file (matrix)
3 1e-36-8.519e+0126.05%13.93%56.0bp (75.3bp)SeqBias: polyA-repeat(0.997)
More Information | Similar Motifs Found		motif file (matrix)
4 1e-22-5.188e+013.54%0.67%47.7bp (74.6bp)OPI1(MacIsaac)/Yeast(0.811)
More Information | Similar Motifs Found		motif file (matrix)
5 1e-20-4.713e+0153.16%41.53%52.9bp (81.3bp)RSC3/MA0374.1/Jaspar(0.894)
More Information | Similar Motifs Found		motif file (matrix)
6 1e-17-4.143e+012.79%0.53%50.5bp (71.4bp)SFP1/SFP1_SM/50-RAP1(Harbison)/Yeast(0.927)
More Information | Similar Motifs Found		motif file (matrix)
7 1e-17-4.095e+0135.86%25.99%57.3bp (70.7bp)YAP6(MacIsaac)/Yeast(0.874)
More Information | Similar Motifs Found		motif file (matrix)
8 1e-15-3.457e+0123.26%15.64%55.4bp (72.6bp)MSN4(MacIsaac)/Yeast(0.914)
More Information | Similar Motifs Found		motif file (matrix)
9 1e-14-3.435e+012.73%0.62%49.0bp (57.3bp)STB3/MA0390.1/Jaspar(0.895)
More Information | Similar Motifs Found		motif file (matrix)
10 1e-14-3.386e+0127.54%19.42%55.0bp (73.8bp)ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer(0.802)
More Information | Similar Motifs Found		motif file (matrix)
11 1e-13-3.178e+011.74%0.26%42.4bp (73.0bp)SUT1(MacIsaac)/Yeast(0.734)
More Information | Similar Motifs Found		motif file (matrix)
12 1e-12-2.865e+015.65%2.42%58.1bp (75.2bp)EGR2/MA0472.2/Jaspar(0.703)
More Information | Similar Motifs Found		motif file (matrix)
13 *1e-11-2.667e+010.62%0.02%51.1bp (49.4bp)MYB.PH3(2)(MYB)/Petunia hybrida/AthaMap(0.882)
More Information | Similar Motifs Found		motif file (matrix)
14 *1e-11-2.616e+011.55%0.26%51.8bp (69.5bp)ems/dmmpmm(Pollard)/fly(0.691)
More Information | Similar Motifs Found		motif file (matrix)
15 *1e-10-2.505e+012.23%0.57%60.3bp (59.4bp)pho/dmmpmm(Bergman)/fly(0.711)
More Information | Similar Motifs Found		motif file (matrix)
16 *1e-10-2.505e+012.23%0.57%50.7bp (81.4bp)TYE7/TYE7_YPD/39-CBF1(Harbison)/Yeast(0.860)
More Information | Similar Motifs Found		motif file (matrix)
17 *1e-10-2.476e+010.81%0.06%54.6bp (54.7bp)ARR10(GARP)/Arabidopsis thaliana/AthaMap(0.646)
More Information | Similar Motifs Found		motif file (matrix)
18 *1e-10-2.458e+016.64%3.30%56.2bp (83.5bp)POL006.1_BREu/Jaspar(0.815)
More Information | Similar Motifs Found		motif file (matrix)
19 *1e-10-2.443e+0112.41%7.67%57.9bp (76.1bp)OPI1(MacIsaac)/Yeast(0.691)
More Information | Similar Motifs Found		motif file (matrix)
20 *1e-10-2.386e+016.20%3.04%60.3bp (65.7bp)TOD6?/SacCer-Promoters/Homer(0.887)
More Information | Similar Motifs Found		motif file (matrix)
21 *1e-10-2.352e+011.74%0.37%50.1bp (59.8bp)PB0203.1_Zfp691_2/Jaspar(0.670)
More Information | Similar Motifs Found		motif file (matrix)
22 *1e-10-2.347e+017.07%3.67%57.8bp (72.8bp)PB0091.1_Zbtb3_1/Jaspar(0.687)
More Information | Similar Motifs Found		motif file (matrix)
23 *1e-9-2.297e+010.99%0.11%46.8bp (45.7bp)GCR2(MacIsaac)/Yeast(0.743)
More Information | Similar Motifs Found		motif file (matrix)
24 *1e-9-2.246e+013.66%1.43%54.6bp (69.2bp)RPN4/RPN4_H2O2Lo/[](Harbison)/Yeast(0.982)
More Information | Similar Motifs Found		motif file (matrix)
25 *1e-9-2.208e+010.87%0.09%51.1bp (72.5bp)MET31/MA0333.1/Jaspar(0.677)
More Information | Similar Motifs Found		motif file (matrix)
26 *1e-8-2.043e+011.36%0.27%50.1bp (77.8bp)MAC1/MA0326.1/Jaspar(0.729)
More Information | Similar Motifs Found		motif file (matrix)
27 *1e-7-1.802e+013.23%1.34%49.0bp (68.2bp)STP3/MA0396.1/Jaspar(0.721)
More Information | Similar Motifs Found		motif file (matrix)
28 *1e-7-1.695e+019.49%6.05%55.2bp (73.5bp)PHA-4(Forkhead)/cElegans-Embryos-PHA4-ChIP-Seq(modEncode)/Homer(0.750)
More Information | Similar Motifs Found		motif file (matrix)
29 *1e-7-1.652e+010.50%0.03%56.9bp (52.2bp)MET31(MacIsaac)/Yeast(0.732)
More Information | Similar Motifs Found		motif file (matrix)
30 *1e-7-1.621e+010.93%0.16%41.4bp (65.3bp)PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer(0.755)
More Information | Similar Motifs Found		motif file (matrix)
31 *1e-5-1.216e+010.25%0.01%27.5bp (24.5bp)NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer(0.654)
More Information | Similar Motifs Found		motif file (matrix)
32 *1e-3-9.057e+004.03%2.46%59.4bp (65.9bp)DOF5.3/MA1071.1/Jaspar(0.802)
More Information | Similar Motifs Found		motif file (matrix)
33 *1e-3-7.360e+000.12%0.00%39.1bp (10.7bp)SOX9/MA0077.1/Jaspar(0.586)
More Information | Similar Motifs Found		motif file (matrix)