Information for 11-AAGCGCGCCC (Motif 18)


Reverse Opposite:

p-value:1e-10
log p-value:-2.458e+01
Information Content per bp:1.648
Number of Target Sequences with motif107.0
Percentage of Target Sequences with motif6.64%
Number of Background Sequences with motif1471.9
Percentage of Background Sequences with motif3.30%
Average Position of motif in Targets97.6 +/- 56.2bp
Average Position of motif in Background101.6 +/- 83.5bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

POL006.1_BREu/Jaspar

Match Rank:1
Score:0.81
Offset:1
Orientation:forward strand
Alignment:AAGCGCGCCC
-AGCGCGCC-

PB0009.1_E2F3_1/Jaspar

Match Rank:2
Score:0.78
Offset:-1
Orientation:reverse strand
Alignment:-AAGCGCGCCC----
ANCGCGCGCCCTTNN

DPL-1(E2F)/cElegans-Adult-ChIP-Seq(modEncode)/Homer

Match Rank:3
Score:0.76
Offset:0
Orientation:forward strand
Alignment:AAGCGCGCCC
TAGCGCGC--

PB0008.1_E2F2_1/Jaspar

Match Rank:4
Score:0.75
Offset:-1
Orientation:reverse strand
Alignment:-AAGCGCGCCC----
NTCGCGCGCCTTNNN

PB0095.1_Zfp161_1/Jaspar

Match Rank:5
Score:0.71
Offset:-4
Orientation:reverse strand
Alignment:----AAGCGCGCCC--
NCANGCGCGCGCGCCA

EFL-1(E2F)/cElegans-L1-EFL1-ChIP-Seq(modEncode)/Homer

Match Rank:6
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---AAGCGCGCCC--
TGCAARYGCGCTCYA

TEA1/MA0405.1/Jaspar

Match Rank:7
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:AAGCGCGCCC
ATGCCCGC--

PB0052.1_Plagl1_1/Jaspar

Match Rank:8
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--AAGCGCGCCC----
NNNGGGGCGCCCCCNN

RSC30/MA0375.1/Jaspar

Match Rank:9
Score:0.69
Offset:1
Orientation:forward strand
Alignment:AAGCGCGCCC
-CGCGCGCG-

RSC3/MA0374.1/Jaspar

Match Rank:10
Score:0.68
Offset:3
Orientation:forward strand
Alignment:AAGCGCGCCC
---CGCGCGG