Information for 1-GTTACCCGGC (Motif 1)


Reverse Opposite:

p-value:1e-74
log p-value:-1.722e+02
Information Content per bp:1.650
Number of Target Sequences with motif269.0
Percentage of Target Sequences with motif16.69%
Number of Background Sequences with motif2012.9
Percentage of Background Sequences with motif4.51%
Average Position of motif in Targets104.4 +/- 46.2bp
Average Position of motif in Background98.1 +/- 76.9bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

REB1/SacCer-Promoters/Homer

Match Rank:1
Score:0.97
Offset:-2
Orientation:reverse strand
Alignment:--GTTACCCGGC
YYRTTACCCGGM

REB1/MA0363.1/Jaspar

Match Rank:2
Score:0.97
Offset:0
Orientation:forward strand
Alignment:GTTACCCGGC
GTTACCCGG-

REB1(MacIsaac)/Yeast

Match Rank:3
Score:0.96
Offset:1
Orientation:forward strand
Alignment:GTTACCCGGC
-TTACCCGG-

REB1/REB1_YPD/61-REB1(Harbison)/Yeast

Match Rank:4
Score:0.94
Offset:1
Orientation:reverse strand
Alignment:GTTACCCGGC
-TTACCCG--

STB2(MacIsaac)/Yeast

Match Rank:5
Score:0.93
Offset:0
Orientation:reverse strand
Alignment:GTTACCCGGC
NTTACCCG--

YDR026c/YDR026c_YPD/[](Harbison)/Yeast

Match Rank:6
Score:0.91
Offset:0
Orientation:forward strand
Alignment:GTTACCCGGC
TTTACCCGGC

NSI1/MA0421.1/Jaspar

Match Rank:7
Score:0.90
Offset:0
Orientation:forward strand
Alignment:GTTACCCGGC
TTTACCCGGC

YDR026C(MacIsaac)/Yeast

Match Rank:8
Score:0.81
Offset:3
Orientation:forward strand
Alignment:GTTACCCGGC
---ACCCGG-

YRR1(MacIsaac)/Yeast

Match Rank:9
Score:0.79
Offset:-4
Orientation:forward strand
Alignment:----GTTACCCGGC
TTTTGTTACCCG--

PB0153.1_Nr2f2_2/Jaspar

Match Rank:10
Score:0.78
Offset:-3
Orientation:reverse strand
Alignment:---GTTACCCGGC---
NNNNTGACCCGGCGCG