Information for 21-TAAAGCGCTA (Motif 27)


Reverse Opposite:

p-value:1e-7
log p-value:-1.802e+01
Information Content per bp:1.651
Number of Target Sequences with motif52.0
Percentage of Target Sequences with motif3.23%
Number of Background Sequences with motif598.0
Percentage of Background Sequences with motif1.34%
Average Position of motif in Targets114.3 +/- 49.0bp
Average Position of motif in Background105.6 +/- 68.2bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

STP3/MA0396.1/Jaspar

Match Rank:1
Score:0.72
Offset:3
Orientation:reverse strand
Alignment:TAAAGCGCTA--
---TGCGCTAGC

DOF2(C2C2(Zn) Dof)/Zea mays/AthaMap

Match Rank:2
Score:0.71
Offset:-3
Orientation:forward strand
Alignment:---TAAAGCGCTA
AAATAAAGCAA--

STP4/MA0397.1/Jaspar

Match Rank:3
Score:0.71
Offset:3
Orientation:reverse strand
Alignment:TAAAGCGCTA--
---TGCGCTATC

Dof3/MA0021.1/Jaspar

Match Rank:4
Score:0.68
Offset:1
Orientation:forward strand
Alignment:TAAAGCGCTA
-AAAGCG---

MNB1A/MA0053.1/Jaspar

Match Rank:5
Score:0.67
Offset:1
Orientation:forward strand
Alignment:TAAAGCGCTA
-AAAGC----

PBF/MA0064.1/Jaspar

Match Rank:6
Score:0.66
Offset:1
Orientation:forward strand
Alignment:TAAAGCGCTA
-AAAGC----

Dof2/MA0020.1/Jaspar

Match Rank:7
Score:0.66
Offset:1
Orientation:forward strand
Alignment:TAAAGCGCTA
-AAAGCA---

CDF3/MA0974.1/Jaspar

Match Rank:8
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-TAAAGCGCTA
AAAAAGTGC--

DPL-1(E2F)/cElegans-Adult-ChIP-Seq(modEncode)/Homer

Match Rank:9
Score:0.63
Offset:0
Orientation:forward strand
Alignment:TAAAGCGCTA
TAGCGCGC--

PHYPADRAFT_38837/MA1022.1/Jaspar

Match Rank:10
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--TAAAGCGCTA
CAAAAAGTGA--