Information for 14-TGTCATACTGAC (Motif 14)


Reverse Opposite:

p-value:1e-11
log p-value:-2.616e+01
Information Content per bp:1.742
Number of Target Sequences with motif25.0
Percentage of Target Sequences with motif1.55%
Number of Background Sequences with motif117.6
Percentage of Background Sequences with motif0.26%
Average Position of motif in Targets89.4 +/- 51.8bp
Average Position of motif in Background101.2 +/- 69.5bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

ems/dmmpmm(Pollard)/fly

Match Rank:1
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:TGTCATACTGAC
TGTCATNA----

Achi/dmmpmm(Noyes_hd)/fly

Match Rank:2
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--TGTCATACTGAC
GCTGTCAAAN----

ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer

Match Rank:3
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--TGTCATACTGAC-
NAGGTCACNNTGACC

Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer

Match Rank:4
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:TGTCATACTGAC----
TGACCCAGTGACCTAC

vis/MA0252.1/Jaspar

Match Rank:5
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-TGTCATACTGAC
CTGTCA-------

TOS8/MA0408.1/Jaspar

Match Rank:6
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-TGTCATACTGAC
CTGTCAAA-----

MEIS1/MA0498.2/Jaspar

Match Rank:7
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-TGTCATACTGAC
NTGTCAN------

Hth/dmmpmm(Noyes_hd)/fly

Match Rank:8
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--TGTCATACTGAC
NCTGTCANAG----

achi/MA0207.1/Jaspar

Match Rank:9
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-TGTCATACTGAC
CTGTCA-------

Vis/dmmpmm(Noyes_hd)/fly

Match Rank:10
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--TGTCATACTGAC
NCTGTCANNT----