Information for 4-ACCCRNACAT (Motif 6)


Reverse Opposite:

p-value:1e-17
log p-value:-4.143e+01
Information Content per bp:1.700
Number of Target Sequences with motif45.0
Percentage of Target Sequences with motif2.79%
Number of Background Sequences with motif236.1
Percentage of Background Sequences with motif0.53%
Average Position of motif in Targets93.7 +/- 50.5bp
Average Position of motif in Background108.9 +/- 71.4bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

SFP1/SFP1_SM/50-RAP1(Harbison)/Yeast

Match Rank:1
Score:0.93
Offset:0
Orientation:forward strand
Alignment:ACCCRNACAT
ACCCGTACAT

SFP1(MacIsaac)/Yeast

Match Rank:2
Score:0.92
Offset:0
Orientation:reverse strand
Alignment:ACCCRNACAT
ACCCGTACAT

FHL1(MacIsaac)/Yeast

Match Rank:3
Score:0.90
Offset:0
Orientation:reverse strand
Alignment:ACCCRNACAT
ATCCGTACAT

FHL1/FHL1_YPD/47-RAP1(Harbison)/Yeast

Match Rank:4
Score:0.89
Offset:-1
Orientation:reverse strand
Alignment:-ACCCRNACAT
CACCCGTACAT

RAP1/MA0359.1/Jaspar

Match Rank:5
Score:0.88
Offset:-1
Orientation:forward strand
Alignment:-ACCCRNACAT
CACCCATACA-

RAP1(MacIsaac)/Yeast

Match Rank:6
Score:0.88
Offset:-2
Orientation:forward strand
Alignment:--ACCCRNACAT
ACACCCATACAC

RAP1/RAP1_YPD/85-RAP1(Harbison)/Yeast

Match Rank:7
Score:0.87
Offset:-1
Orientation:reverse strand
Alignment:-ACCCRNACAT
CACCCGTACA-

PB0060.1_Smad3_1/Jaspar

Match Rank:8
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---ACCCRNACAT----
CAAATCCAGACATCACA

sma-4/MA0925.1/Jaspar

Match Rank:9
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:ACCCRNACAT-
NNCCAGACANN

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-ACCCRNACAT
CRCCCACGCA-