Information for 6-GCTCGGCC (Motif 10)


Reverse Opposite:

p-value:1e-14
log p-value:-3.386e+01
Information Content per bp:1.601
Number of Target Sequences with motif444.0
Percentage of Target Sequences with motif27.54%
Number of Background Sequences with motif8669.6
Percentage of Background Sequences with motif19.42%
Average Position of motif in Targets98.5 +/- 55.0bp
Average Position of motif in Background99.5 +/- 73.8bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.80
Offset:0
Orientation:reverse strand
Alignment:GCTCGGCC--
GCTCGGSCTC

RDS1/RDS1_H2O2Hi/[](Harbison)/Yeast

Match Rank:2
Score:0.78
Offset:2
Orientation:reverse strand
Alignment:GCTCGGCC--
--TCGGCCGA

IME1/MA0320.1/Jaspar

Match Rank:3
Score:0.76
Offset:1
Orientation:reverse strand
Alignment:GCTCGGCC-
-CTCGGCGG

IME1(MacIsaac)/Yeast

Match Rank:4
Score:0.75
Offset:1
Orientation:reverse strand
Alignment:GCTCGGCC-
-CTCGGCGG

RDS1/MA0361.1/Jaspar

Match Rank:5
Score:0.74
Offset:2
Orientation:reverse strand
Alignment:GCTCGGCC-
--NCGGCCG

YLL054C/MA0429.1/Jaspar

Match Rank:6
Score:0.74
Offset:2
Orientation:reverse strand
Alignment:GCTCGGCC-
--TCGGCCG

RDS1(MacIsaac)/Yeast

Match Rank:7
Score:0.73
Offset:3
Orientation:forward strand
Alignment:GCTCGGCC-
---CGGCCG

SKN7/MA0381.1/Jaspar

Match Rank:8
Score:0.73
Offset:2
Orientation:reverse strand
Alignment:GCTCGGCC
--NTGGCC

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:9
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:GCTCGGCC-
-CTAGGCCT

CHA4/MA0283.1/Jaspar

Match Rank:10
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:GCTCGGCC
TCTCCGCC