Information for 19-ACTGTGCTCG (Motif 26)


Reverse Opposite:

p-value:1e-8
log p-value:-2.043e+01
Information Content per bp:1.832
Number of Target Sequences with motif22.0
Percentage of Target Sequences with motif1.36%
Number of Background Sequences with motif121.0
Percentage of Background Sequences with motif0.27%
Average Position of motif in Targets104.5 +/- 50.1bp
Average Position of motif in Background96.2 +/- 77.8bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MAC1/MA0326.1/Jaspar

Match Rank:1
Score:0.73
Offset:2
Orientation:forward strand
Alignment:ACTGTGCTCG
--TTTGCTCA

PB0099.1_Zfp691_1/Jaspar

Match Rank:2
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---ACTGTGCTCG----
CGAACAGTGCTCACTAT

MAC1/Literature(Harbison)/Yeast

Match Rank:3
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:ACTGTGCTCG
--TTTGCTC-

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:4
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:ACTGTGCTCG-
-CTGTTCCTGG

GLI2/MA0734.1/Jaspar

Match Rank:5
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-ACTGTGCTCG-
CAGTGTGGTCGC

HMRA1/MA0327.1/Jaspar

Match Rank:6
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:ACTGTGCTCG
ATTGTGC---

MATA1(MacIsaac)/Yeast

Match Rank:7
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:ACTGTGCTCG
ATTGTGC---

ZBTB7A/MA0750.1/Jaspar

Match Rank:8
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:ACTGTGCTCG--
TCGGTGGTCGCN

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.59
Offset:1
Orientation:forward strand
Alignment:ACTGTGCTCG-
-CNGTCCTCCC

MET31/Literature(Harbison)/Yeast

Match Rank:10
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--ACTGTGCTCG
AAACTGTGG---