Information for 8-AAAATTTTTCAC (Motif 9)


Reverse Opposite:

p-value:1e-14
log p-value:-3.435e+01
Information Content per bp:1.820
Number of Target Sequences with motif44.0
Percentage of Target Sequences with motif2.73%
Number of Background Sequences with motif275.8
Percentage of Background Sequences with motif0.62%
Average Position of motif in Targets98.1 +/- 49.0bp
Average Position of motif in Background97.0 +/- 57.3bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

STB3/MA0390.1/Jaspar

Match Rank:1
Score:0.89
Offset:-4
Orientation:forward strand
Alignment:----AAAATTTTTCAC-----
GTCCAAAATTTTTCACTCTGG

SFP1/SacCer-Promoters/Homer

Match Rank:2
Score:0.83
Offset:-1
Orientation:reverse strand
Alignment:-AAAATTTTTCAC
RAAAATTTTTHH-

SFP1/MA0378.1/Jaspar

Match Rank:3
Score:0.80
Offset:-6
Orientation:reverse strand
Alignment:------AAAATTTTTCAC---
CNGNAGAAAATTTTTTNNNNT

SUM1/MA0398.1/Jaspar

Match Rank:4
Score:0.74
Offset:0
Orientation:forward strand
Alignment:AAAATTTTTCAC
AAAATTTTT---

cad/dmmpmm(Down)/fly

Match Rank:5
Score:0.74
Offset:1
Orientation:reverse strand
Alignment:AAAATTTTTCAC
-AAATTTTT---

NFAT5/MA0606.1/Jaspar

Match Rank:6
Score:0.73
Offset:3
Orientation:forward strand
Alignment:AAAATTTTTCAC-
---ATTTTCCATT

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:7
Score:0.72
Offset:3
Orientation:forward strand
Alignment:AAAATTTTTCAC-
---ATTTTCCATT

NFATC3/MA0625.1/Jaspar

Match Rank:8
Score:0.68
Offset:3
Orientation:forward strand
Alignment:AAAATTTTTCAC-
---ATTTTCCATT

NFATC2/MA0152.1/Jaspar

Match Rank:9
Score:0.68
Offset:4
Orientation:forward strand
Alignment:AAAATTTTTCAC
----TTTTCCA-

AHL12/MA0932.1/Jaspar

Match Rank:10
Score:0.66
Offset:1
Orientation:forward strand
Alignment:AAAATTTTTCAC
-AATTAATT---