Information for 9-TTCCCCGCGTTA (Motif 11)


Reverse Opposite:

p-value:1e-13
log p-value:-3.178e+01
Information Content per bp:1.827
Number of Target Sequences with motif28.0
Percentage of Target Sequences with motif1.74%
Number of Background Sequences with motif117.5
Percentage of Background Sequences with motif0.26%
Average Position of motif in Targets110.7 +/- 42.4bp
Average Position of motif in Background111.9 +/- 73.0bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

SUT1(MacIsaac)/Yeast

Match Rank:1
Score:0.73
Offset:2
Orientation:reverse strand
Alignment:TTCCCCGCGTTA
--CCCCGCG---

ZMS1/MA0441.1/Jaspar

Match Rank:2
Score:0.73
Offset:0
Orientation:forward strand
Alignment:TTCCCCGCGTTA
TTCCCCGCA---

SUT1/MA0399.1/Jaspar

Match Rank:3
Score:0.71
Offset:2
Orientation:reverse strand
Alignment:TTCCCCGCGTTA
--CCCCGCG---

MIG2/MA0338.1/Jaspar

Match Rank:4
Score:0.69
Offset:2
Orientation:forward strand
Alignment:TTCCCCGCGTTA
--CCCCGCA---

MIG3/MA0339.1/Jaspar

Match Rank:5
Score:0.68
Offset:2
Orientation:forward strand
Alignment:TTCCCCGCGTTA
--CCCCGCA---

CMTA3/MA0970.1/Jaspar

Match Rank:6
Score:0.68
Offset:4
Orientation:forward strand
Alignment:TTCCCCGCGTTA-
----CCGCGTTAC

MIG1(MacIsaac)/Yeast

Match Rank:7
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:TTCCCCGCGTTA
--CCCCACAAAA

YGR067C/MA0425.1/Jaspar

Match Rank:8
Score:0.65
Offset:1
Orientation:forward strand
Alignment:TTCCCCGCGTTA---
-ACCCCACTTTTTCA

TDA9/MA0431.1/Jaspar

Match Rank:9
Score:0.65
Offset:1
Orientation:forward strand
Alignment:TTCCCCGCGTTA
-ACCCCGCAC--

MBP1::SWI6/MA0330.1/Jaspar

Match Rank:10
Score:0.65
Offset:4
Orientation:forward strand
Alignment:TTCCCCGCGTTA
----ACGCGTT-