Information for 19-AGGCGSCACACT (Motif 25)


Reverse Opposite:

p-value:1e-9
log p-value:-2.208e+01
Information Content per bp:1.786
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif0.87%
Number of Background Sequences with motif38.7
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets100.4 +/- 51.1bp
Average Position of motif in Background110.0 +/- 72.5bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MET31/MA0333.1/Jaspar

Match Rank:1
Score:0.68
Offset:3
Orientation:reverse strand
Alignment:AGGCGSCACACT
---CGCCACANN

MET4/MET4_SM/[](Harbison)/Yeast

Match Rank:2
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:AGGCGSCACACT----
-GGCGCCACANTTTTT

brk/dmmpmm(Papatsenko)/fly

Match Rank:3
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:AGGCGSCACACT
-GGCGCCAG---

NtERF2(AP2/EREBP)/Nicotiana tabacum/AthaMap

Match Rank:4
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:AGGCGSCACACT
-GGCGGCG----

brk/dmmpmm(Pollard)/fly

Match Rank:5
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:AGGCGSCACACT
-GGCGCCAG---

brk/MA0213.1/Jaspar

Match Rank:6
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:AGGCGSCACACT
-GGCGCCAG---

E(spl)/dmmpmm(Pollard)/fly

Match Rank:7
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--AGGCGSCACACT
GCACGNGGCACA--

E(spl)/dmmpmm(Papatsenko)/fly

Match Rank:8
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-AGGCGSCACACT
CACAAGGCACA--

PB0112.1_E2F2_2/Jaspar

Match Rank:9
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----AGGCGSCACACT-
CCTTCGGCGCCAAAAGG

MET31(MacIsaac)/Yeast

Match Rank:10
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:AGGCGSCACACT
----GCCACACC