Information for 24-TAGGAGATGGCA (Motif 31)


Reverse Opposite:

p-value:1e-5
log p-value:-1.216e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.25%
Number of Background Sequences with motif3.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets154.0 +/- 27.5bp
Average Position of motif in Background46.1 +/- 24.5bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:1
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:TAGGAGATGGCA
-AACAGATGGC-

YNR063W/MA0432.1/Jaspar

Match Rank:2
Score:0.63
Offset:0
Orientation:forward strand
Alignment:TAGGAGATGGCA
TCGGAGAT----

Hic1/MA0739.1/Jaspar

Match Rank:3
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:TAGGAGATGGCA-
----GGTTGGCAT

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:4
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:TAGGAGATGGCA
----ARNTGACA

PB0098.1_Zfp410_1/Jaspar

Match Rank:5
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---TAGGAGATGGCA--
TATTATGGGATGGATAA

PL0002.1_hlh-2::hlh-3/Jaspar

Match Rank:6
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---TAGGAGATGGCA--
NATNAGCAGGTGTTNNN

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:7
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----TAGGAGATGGCA----
TGGCCACCAGGTGGCACTNT

ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer

Match Rank:8
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-TAGGAGATGGCA
ACAGGATGTGGT-

PDR8/MA0354.1/Jaspar

Match Rank:9
Score:0.57
Offset:0
Orientation:forward strand
Alignment:TAGGAGATGGCA
ACGGAGAT----

Unknown3/Drosophila-Promoters/Homer

Match Rank:10
Score:0.57
Offset:1
Orientation:forward strand
Alignment:TAGGAGATGGCA----
-ACVAKCTGGCAGCGC