Information for 2-TCACTATATACG (Motif 2)


Reverse Opposite:

p-value:1e-37
log p-value:-8.546e+01
Information Content per bp:1.665
Number of Target Sequences with motif113.0
Percentage of Target Sequences with motif7.01%
Number of Background Sequences with motif712.5
Percentage of Background Sequences with motif1.60%
Average Position of motif in Targets98.8 +/- 40.7bp
Average Position of motif in Background100.2 +/- 74.0bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

ABF1/ABF1_YPD/62-ABF1(Harbison)/Yeast

Match Rank:1
Score:0.92
Offset:-1
Orientation:forward strand
Alignment:-TCACTATATACG
ATCACTNTNNACG

ABF1(MacIsaac)/Yeast

Match Rank:2
Score:0.90
Offset:-2
Orientation:forward strand
Alignment:--TCACTATATACG-
TATCACTNTNNACGA

ABF1/SacCer-Promoters/Homer

Match Rank:3
Score:0.90
Offset:0
Orientation:reverse strand
Alignment:TCACTATATACG
TCAYTTTNYACG

ABF1/MA0265.1/Jaspar

Match Rank:4
Score:0.88
Offset:-3
Orientation:reverse strand
Alignment:---TCACTATATACG-
NNATCACTNNNTACGA

UPC2/MA0411.1/Jaspar

Match Rank:5
Score:0.64
Offset:6
Orientation:forward strand
Alignment:TCACTATATACG-
------TATACGA

PB0106.1_Arid5a_2/Jaspar

Match Rank:6
Score:0.61
Offset:1
Orientation:forward strand
Alignment:TCACTATATACG------
-CATACAATACGAAATAA

bin/dmmpmm(Pollard)/fly

Match Rank:7
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TCACTATATACG
TCGTTGTTTA--

Cf2-II/dmmpmm(Pollard)/fly

Match Rank:8
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:TCACTATATACG-
-----TTATACNC

SPL12/MA1057.1/Jaspar

Match Rank:9
Score:0.57
Offset:6
Orientation:forward strand
Alignment:TCACTATATACG--
------TGTACGGT

SPL5/MA1059.1/Jaspar

Match Rank:10
Score:0.57
Offset:5
Orientation:forward strand
Alignment:TCACTATATACG--
-----TTGTACGGC