Information for 25-TACGATGGTGAT (Motif 33)


Reverse Opposite:

p-value:1e-3
log p-value:-7.360e+00
Information Content per bp:1.730
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.12%
Number of Background Sequences with motif1.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets132.0 +/- 39.1bp
Average Position of motif in Background168.7 +/- 10.7bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)2.50
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

SOX9/MA0077.1/Jaspar

Match Rank:1
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TACGATGGTGAT
GAACAATGG----

PB0132.1_Hbp1_2/Jaspar

Match Rank:2
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----TACGATGGTGAT-
NNTNNACAATGGGANNN

YOX1/Literature(Harbison)/Yeast

Match Rank:3
Score:0.58
Offset:1
Orientation:forward strand
Alignment:TACGATGGTGAT-
-ACAATANTGAAA

Sox2/MA0143.3/Jaspar

Match Rank:4
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:TACGATGGTGAT
AACAAAGG----

skn-1/MA0547.1/Jaspar

Match Rank:5
Score:0.56
Offset:1
Orientation:forward strand
Alignment:TACGATGGTGAT----
-AAAATGATGACAATT

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:6
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-TACGATGGTGAT
RAACAATGGN---

Optix/dmmpmm(Noyes)/fly

Match Rank:7
Score:0.56
Offset:5
Orientation:forward strand
Alignment:TACGATGGTGAT-
-----ANGTGATA

Optix/dmmpmm(Noyes_hd)/fly

Match Rank:8
Score:0.56
Offset:5
Orientation:forward strand
Alignment:TACGATGGTGAT---
-----AAGTGATAAA

YY2/MA0748.1/Jaspar

Match Rank:9
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:TACGATGGTGAT-
--TAATGGCGGNC

UPC2/MA0411.1/Jaspar

Match Rank:10
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--TACGATGGTGAT
TATACGA-------