Information for 9-CTCATCCC (Motif 20)


Reverse Opposite:

p-value:1e-10
log p-value:-2.386e+01
Information Content per bp:1.806
Number of Target Sequences with motif100.0
Percentage of Target Sequences with motif6.20%
Number of Background Sequences with motif1355.0
Percentage of Background Sequences with motif3.04%
Average Position of motif in Targets96.1 +/- 60.3bp
Average Position of motif in Background95.9 +/- 65.7bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

TOD6?/SacCer-Promoters/Homer

Match Rank:1
Score:0.89
Offset:-2
Orientation:reverse strand
Alignment:--CTCATCCC
AKCTCATCGC

TOD6/MA0350.1/Jaspar

Match Rank:2
Score:0.82
Offset:-8
Orientation:forward strand
Alignment:--------CTCATCCC-----
AGGCACAGCTCATCGCGTTTT

DOT6/MA0351.1/Jaspar

Match Rank:3
Score:0.80
Offset:-8
Orientation:forward strand
Alignment:--------CTCATCCC-----
TTCTGCACCTCATCGCATCCT

CHA4(MacIsaac)/Yeast

Match Rank:4
Score:0.79
Offset:0
Orientation:reverse strand
Alignment:CTCATCCC-
CTCATCGCA

GZF3/Literature(Harbison)/Yeast

Match Rank:5
Score:0.77
Offset:0
Orientation:reverse strand
Alignment:CTCATCCC
CTTATC--

GZF3(MacIsaac)/Yeast

Match Rank:6
Score:0.77
Offset:0
Orientation:reverse strand
Alignment:CTCATCCC
CTTATC--

DAL82/DAL82_SM/3-DAL82(Harbison)/Yeast

Match Rank:7
Score:0.75
Offset:-1
Orientation:reverse strand
Alignment:-CTCATCCC
TCTTATC--

GLN3/GLN3_RAPA/8-GZF3,11-GLN3(Harbison)/Yeast

Match Rank:8
Score:0.74
Offset:-3
Orientation:reverse strand
Alignment:---CTCATCCC
TATCTTATC--

GAT1/GAT1_RAPA/1-GZF3,2-GLN3(Harbison)/Yeast

Match Rank:9
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:CTCATCCC
CTTATCT-

GAT1(MacIsaac)/Yeast

Match Rank:10
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:CTCATCCC
CTTATCT-