Information for 10-AAGMATAGCY (Motif 15)


Reverse Opposite:

p-value:1e-10
log p-value:-2.505e+01
Information Content per bp:1.788
Number of Target Sequences with motif36.0
Percentage of Target Sequences with motif2.23%
Number of Background Sequences with motif254.8
Percentage of Background Sequences with motif0.57%
Average Position of motif in Targets98.3 +/- 60.3bp
Average Position of motif in Background105.1 +/- 59.4bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

pho/dmmpmm(Bergman)/fly

Match Rank:1
Score:0.71
Offset:3
Orientation:reverse strand
Alignment:AAGMATAGCY
---AATGGC-

SOX9/MA0077.1/Jaspar

Match Rank:2
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-AAGMATAGCY
GAACAATGG--

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:3
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---AAGMATAGCY
GCTAAAAATAGC-

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:4
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-AAGMATAGCY
RAACAATGGN-

MEF2C/MA0497.1/Jaspar

Match Rank:5
Score:0.67
Offset:-5
Orientation:forward strand
Alignment:-----AAGMATAGCY
ATGCTAAAAATAGAA

D/MA0445.1/Jaspar

Match Rank:6
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--AAGMATAGCY
ANAACAATGGA-

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---AAGMATAGCY
DCYAAAAATAGM-

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:8
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--AAGMATAGCY
CCAAAAATAG--

D/dmmpmm(Noyes)/fly

Match Rank:9
Score:0.66
Offset:-7
Orientation:forward strand
Alignment:-------AAGMATAGCY
CACNGANAACAATGG--

YAP5(MacIsaac)/Yeast

Match Rank:10
Score:0.66
Offset:0
Orientation:forward strand
Alignment:AAGMATAGCY
AAGCAT----