Information for 23-CCACACTAGT (Motif 29)


Reverse Opposite:

p-value:1e-7
log p-value:-1.652e+01
Information Content per bp:1.967
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.50%
Number of Background Sequences with motif14.5
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets85.1 +/- 56.9bp
Average Position of motif in Background87.8 +/- 52.2bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MET31(MacIsaac)/Yeast

Match Rank:1
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-CCACACTAGT
GCCACACC---

br-Z3/dmmpmm(Pollard)/fly

Match Rank:2
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:CCACACTAGT--
----ACTAGTTT

MET32/MA0334.1/Jaspar

Match Rank:3
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CCACACTAGT
CGCCACA-----

br-Z3/dmmpmm(Bigfoot)/fly

Match Rank:4
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:CCACACTAGT---
--AAACTANTTGT

GLI2/MA0734.1/Jaspar

Match Rank:5
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----CCACACTAGT
GCGACCACACTG--

Unknown1(NR/Ini-like)/Drosophila-Promoters/Homer

Match Rank:6
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----CCACACTAGT
MYGGTCACACTG--

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:7
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----CCACACTAGT
NWAACCACADNN--

ABF3/MA0930.1/Jaspar

Match Rank:8
Score:0.61
Offset:2
Orientation:forward strand
Alignment:CCACACTAGT
--ACACGTGT

Unknown2/Drosophila-Promoters/Homer

Match Rank:9
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CCACACTAGT
CATCMCTA--

PB0208.1_Zscan4_2/Jaspar

Match Rank:10
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----CCACACTAGT--
CGAAGCACACAAAATA