Information for 5-CCCCTTAW (Motif 8)


Reverse Opposite:

p-value:1e-15
log p-value:-3.457e+01
Information Content per bp:1.689
Number of Target Sequences with motif375.0
Percentage of Target Sequences with motif23.26%
Number of Background Sequences with motif6981.7
Percentage of Background Sequences with motif15.64%
Average Position of motif in Targets99.2 +/- 55.4bp
Average Position of motif in Background100.7 +/- 72.6bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MSN4(MacIsaac)/Yeast

Match Rank:1
Score:0.91
Offset:-1
Orientation:reverse strand
Alignment:-CCCCTTAW
CCCCCTT--

GIS1/MA0306.1/Jaspar

Match Rank:2
Score:0.90
Offset:-1
Orientation:forward strand
Alignment:-CCCCTTAW
ACCCCTAAA

MSN4/Literature(Harbison)/Yeast

Match Rank:3
Score:0.89
Offset:-1
Orientation:reverse strand
Alignment:-CCCCTTAW
NCCCCTG--

RPH1/MA0372.1/Jaspar

Match Rank:4
Score:0.87
Offset:-1
Orientation:forward strand
Alignment:-CCCCTTAW
ACCCCTAA-

MSN2(MacIsaac)/Yeast

Match Rank:5
Score:0.87
Offset:-1
Orientation:reverse strand
Alignment:-CCCCTTAW
GCCCCTT--

RGM1/MA0366.1/Jaspar

Match Rank:6
Score:0.86
Offset:0
Orientation:reverse strand
Alignment:CCCCTTAW
CCCCT---

MSN4/MA0342.1/Jaspar

Match Rank:7
Score:0.86
Offset:0
Orientation:reverse strand
Alignment:CCCCTTAW
CCCCT---

RPH1/Literature(Harbison)/Yeast

Match Rank:8
Score:0.85
Offset:0
Orientation:forward strand
Alignment:CCCCTTAW--
CCCCTTAAGG

RPH1(MacIsaac)/Yeast

Match Rank:9
Score:0.85
Offset:0
Orientation:forward strand
Alignment:CCCCTTAW--
CCCCTTAAGG

YER130C/MA0423.1/Jaspar

Match Rank:10
Score:0.84
Offset:-1
Orientation:forward strand
Alignment:-CCCCTTAW
ACCCCTATT